Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120609941

Identifier: 120609941

GI number: 120609941

Start: 1377354

End: 1377932

Strand: Reverse

Name: 120609941

Synonym: Aave_1254

Alternate gene names: NA

Gene position: 1377932-1377354 (Counterclockwise)

Preceding gene: 120609943

Following gene: 120609933

Centisome position: 25.74

GC content: 73.06

Gene sequence:

>579_bases
ATGCAGCCTTCCATTGTCGCCAATGTCCCGCCCTCTCCGCACTCCATGCTGCTCTTGAAGACCGACAAGGCCCGCCTGGA
ACTCTCCCCGGGCGTGCGCACCCTCAGCCTGCGCGAACGCTCATTGCTGCTGCTGGTCGACGGCCGGCCCGCGGCCGAGC
TGGAAGCGCTCTACCACGGCGCCGGCAAGGACATCGTGGCCCGCCTGCTGGCGGACGGCTACCTCGCGCAGGCCGGCGGC
GCGGCGGCCCCGGCGCCTGCCGCCACACCGTCCGCAGCCGCCGTGCCGCGCCAGGCGCCATCCGGGGCCCCGCCGGAAGC
CCCGCCCGCGCCTTCCAACGCGCTGCGCTCGCTCGCGGGCGCACGCATGTACCTGTTCGACATCTGCGAGCGCATGTTCG
CGCGGCGCAACCCCGCGCTGGCCCAGAACTTCCTGGACGCGCTGCGCGGCGCGCGCGACCGCGACAGCATGATGGATGTC
AGCGAGGCCTTGCTGGAAGAGATCGAACTGCTGGCCGGACCGGAACGGGCCGCCACCGTGCGCCGGCGCATGGAGCAGTT
GCTGCCCACGCCGGCCTGA

Upstream 100 bases:

>100_bases
CCTCCATGGGGGCGAGCAGCAGCAGGGGAGGTTGGGACATCGGGGCAGGGGCGCCCGCACCGGAGGCCGCGTCATCGCGG
CGTCATCGGAGTGCGGTGGA

Downstream 100 bases:

>100_bases
CACGGCGCGCCGGAGGGGCTTGCGGCCCGCGGCCTCAGGCGACGCCCAGCCGCCAGAGCGAGGTGGTTTCCGCCGCTCGC
GCCGCGTGCAGCGGATCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MQPSIVANVPPSPHSMLLLKTDKARLELSPGVRTLSLRERSLLLLVDGRPAAELEALYHGAGKDIVARLLADGYLAQAGG
AAAPAPAATPSAAAVPRQAPSGAPPEAPPAPSNALRSLAGARMYLFDICERMFARRNPALAQNFLDALRGARDRDSMMDV
SEALLEEIELLAGPERAATVRRRMEQLLPTPA

Sequences:

>Translated_192_residues
MQPSIVANVPPSPHSMLLLKTDKARLELSPGVRTLSLRERSLLLLVDGRPAAELEALYHGAGKDIVARLLADGYLAQAGG
AAAPAPAATPSAAAVPRQAPSGAPPEAPPAPSNALRSLAGARMYLFDICERMFARRNPALAQNFLDALRGARDRDSMMDV
SEALLEEIELLAGPERAATVRRRMEQLLPTPA
>Mature_192_residues
MQPSIVANVPPSPHSMLLLKTDKARLELSPGVRTLSLRERSLLLLVDGRPAAELEALYHGAGKDIVARLLADGYLAQAGG
AAAPAPAATPSAAAVPRQAPSGAPPEAPPAPSNALRSLAGARMYLFDICERMFARRNPALAQNFLDALRGARDRDSMMDV
SEALLEEIELLAGPERAATVRRRMEQLLPTPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20373; Mature: 20373

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPSIVANVPPSPHSMLLLKTDKARLELSPGVRTLSLRERSLLLLVDGRPAAELEALYHG
CCCCEECCCCCCCCCEEEEECCCCEEEECCCCEEEEECCCEEEEEECCCCHHHHHHHHHC
AGKDIVARLLADGYLAQAGGAAAPAPAATPSAAAVPRQAPSGAPPEAPPAPSNALRSLAG
CCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
ARMYLFDICERMFARRNPALAQNFLDALRGARDRDSMMDVSEALLEEIELLAGPERAATV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
RRRMEQLLPTPA
HHHHHHHCCCCC
>Mature Secondary Structure
MQPSIVANVPPSPHSMLLLKTDKARLELSPGVRTLSLRERSLLLLVDGRPAAELEALYHG
CCCCEECCCCCCCCCEEEEECCCCEEEECCCCEEEEECCCEEEEEECCCCHHHHHHHHHC
AGKDIVARLLADGYLAQAGGAAAPAPAATPSAAAVPRQAPSGAPPEAPPAPSNALRSLAG
CCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
ARMYLFDICERMFARRNPALAQNFLDALRGARDRDSMMDVSEALLEEIELLAGPERAATV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
RRRMEQLLPTPA
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA