Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609941
Identifier: 120609941
GI number: 120609941
Start: 1377354
End: 1377932
Strand: Reverse
Name: 120609941
Synonym: Aave_1254
Alternate gene names: NA
Gene position: 1377932-1377354 (Counterclockwise)
Preceding gene: 120609943
Following gene: 120609933
Centisome position: 25.74
GC content: 73.06
Gene sequence:
>579_bases ATGCAGCCTTCCATTGTCGCCAATGTCCCGCCCTCTCCGCACTCCATGCTGCTCTTGAAGACCGACAAGGCCCGCCTGGA ACTCTCCCCGGGCGTGCGCACCCTCAGCCTGCGCGAACGCTCATTGCTGCTGCTGGTCGACGGCCGGCCCGCGGCCGAGC TGGAAGCGCTCTACCACGGCGCCGGCAAGGACATCGTGGCCCGCCTGCTGGCGGACGGCTACCTCGCGCAGGCCGGCGGC GCGGCGGCCCCGGCGCCTGCCGCCACACCGTCCGCAGCCGCCGTGCCGCGCCAGGCGCCATCCGGGGCCCCGCCGGAAGC CCCGCCCGCGCCTTCCAACGCGCTGCGCTCGCTCGCGGGCGCACGCATGTACCTGTTCGACATCTGCGAGCGCATGTTCG CGCGGCGCAACCCCGCGCTGGCCCAGAACTTCCTGGACGCGCTGCGCGGCGCGCGCGACCGCGACAGCATGATGGATGTC AGCGAGGCCTTGCTGGAAGAGATCGAACTGCTGGCCGGACCGGAACGGGCCGCCACCGTGCGCCGGCGCATGGAGCAGTT GCTGCCCACGCCGGCCTGA
Upstream 100 bases:
>100_bases CCTCCATGGGGGCGAGCAGCAGCAGGGGAGGTTGGGACATCGGGGCAGGGGCGCCCGCACCGGAGGCCGCGTCATCGCGG CGTCATCGGAGTGCGGTGGA
Downstream 100 bases:
>100_bases CACGGCGCGCCGGAGGGGCTTGCGGCCCGCGGCCTCAGGCGACGCCCAGCCGCCAGAGCGAGGTGGTTTCCGCCGCTCGC GCCGCGTGCAGCGGATCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MQPSIVANVPPSPHSMLLLKTDKARLELSPGVRTLSLRERSLLLLVDGRPAAELEALYHGAGKDIVARLLADGYLAQAGG AAAPAPAATPSAAAVPRQAPSGAPPEAPPAPSNALRSLAGARMYLFDICERMFARRNPALAQNFLDALRGARDRDSMMDV SEALLEEIELLAGPERAATVRRRMEQLLPTPA
Sequences:
>Translated_192_residues MQPSIVANVPPSPHSMLLLKTDKARLELSPGVRTLSLRERSLLLLVDGRPAAELEALYHGAGKDIVARLLADGYLAQAGG AAAPAPAATPSAAAVPRQAPSGAPPEAPPAPSNALRSLAGARMYLFDICERMFARRNPALAQNFLDALRGARDRDSMMDV SEALLEEIELLAGPERAATVRRRMEQLLPTPA >Mature_192_residues MQPSIVANVPPSPHSMLLLKTDKARLELSPGVRTLSLRERSLLLLVDGRPAAELEALYHGAGKDIVARLLADGYLAQAGG AAAPAPAATPSAAAVPRQAPSGAPPEAPPAPSNALRSLAGARMYLFDICERMFARRNPALAQNFLDALRGARDRDSMMDV SEALLEEIELLAGPERAATVRRRMEQLLPTPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20373; Mature: 20373
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPSIVANVPPSPHSMLLLKTDKARLELSPGVRTLSLRERSLLLLVDGRPAAELEALYHG CCCCEECCCCCCCCCEEEEECCCCEEEECCCCEEEEECCCEEEEEECCCCHHHHHHHHHC AGKDIVARLLADGYLAQAGGAAAPAPAATPSAAAVPRQAPSGAPPEAPPAPSNALRSLAG CCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHH ARMYLFDICERMFARRNPALAQNFLDALRGARDRDSMMDVSEALLEEIELLAGPERAATV HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH RRRMEQLLPTPA HHHHHHHCCCCC >Mature Secondary Structure MQPSIVANVPPSPHSMLLLKTDKARLELSPGVRTLSLRERSLLLLVDGRPAAELEALYHG CCCCEECCCCCCCCCEEEEECCCCEEEECCCCEEEEECCCEEEEEECCCCHHHHHHHHHC AGKDIVARLLADGYLAQAGGAAAPAPAATPSAAAVPRQAPSGAPPEAPPAPSNALRSLAG CCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHH ARMYLFDICERMFARRNPALAQNFLDALRGARDRDSMMDVSEALLEEIELLAGPERAATV HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH RRRMEQLLPTPA HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA