Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609933
Identifier: 120609933
GI number: 120609933
Start: 1369571
End: 1369825
Strand: Reverse
Name: 120609933
Synonym: Aave_1246
Alternate gene names: NA
Gene position: 1369825-1369571 (Counterclockwise)
Preceding gene: 120609941
Following gene: 120609932
Centisome position: 25.59
GC content: 67.06
Gene sequence:
>255_bases ATGGCCACGCAGACCATCACCACCGAACTCTACGTCCTGTTCCCTTCGCCACGCAACCAGCACCGCGGGGTGTATGCGCA CCAGGTCTTCGTGCCGCATCCGTATGCGCTCATCCACCTGCCGGACTACGGCCTGGCCGGCCCGGCCAGCCTGTTCGCCG CATGCCGGCGGGAGGACAACAAGATGGGGCAGCTGGTCACCTTCGAGCAGGCGGACGATGCCCGGCGGTTCGAGCGGCTC TTCACCCCCGACTGA
Upstream 100 bases:
>100_bases GCGTGCCATGCGGTCTTCCTCGTGCTCGTGTGCGTGATGTCCAGGCCGGATTGTCCACGGGAACGGCCGCCGCGCGACCG GTTTGCTACAGTGGCCGCCC
Downstream 100 bases:
>100_bases CCCACGGCCGGCCCTGCCCCGCGCTGCCCATGCACGACGACAACCAGATCCACGTCCCGCCCTCCTTCACCGCGCTCTAC AGCGACGCGCGCCAGCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MATQTITTELYVLFPSPRNQHRGVYAHQVFVPHPYALIHLPDYGLAGPASLFAACRREDNKMGQLVTFEQADDARRFERL FTPD
Sequences:
>Translated_84_residues MATQTITTELYVLFPSPRNQHRGVYAHQVFVPHPYALIHLPDYGLAGPASLFAACRREDNKMGQLVTFEQADDARRFERL FTPD >Mature_83_residues ATQTITTELYVLFPSPRNQHRGVYAHQVFVPHPYALIHLPDYGLAGPASLFAACRREDNKMGQLVTFEQADDARRFERLF TPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9606; Mature: 9475
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATQTITTELYVLFPSPRNQHRGVYAHQVFVPHPYALIHLPDYGLAGPASLFAACRREDN CCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCC KMGQLVTFEQADDARRFERLFTPD CCCCEEEECCCCHHHHHHHHCCCC >Mature Secondary Structure ATQTITTELYVLFPSPRNQHRGVYAHQVFVPHPYALIHLPDYGLAGPASLFAACRREDN CCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCC KMGQLVTFEQADDARRFERLFTPD CCCCEEEECCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA