Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is trpF [H]
Identifier: 120609903
GI number: 120609903
Start: 1338581
End: 1339351
Strand: Reverse
Name: trpF [H]
Synonym: Aave_1216
Alternate gene names: 120609903
Gene position: 1339351-1338581 (Counterclockwise)
Preceding gene: 120609904
Following gene: 120609902
Centisome position: 25.02
GC content: 68.61
Gene sequence:
>771_bases ATGTCTTCGCCCATGCCTTCATCCGCCCCTGACACGCCCCTGCCGGAAAGCCGGCGCGGCGACGCTCCAGTTCCCCGCAC GCGCATCAAGATCTGCGGCATCACCCGCGAGCAGGACCTGGACGCCGCCGTCCAGGCCGGAGCCGATGCGGTGGGATTCG TGCTGTATCCGAAGAGCCAGCGCGCGGTGACCGTGCAGCGCGCCGCCGCGCTCGCGCGCCGCCTGCCCCCCTTCGTCACG CCCGTGCTCCTGTTCGTGAATGCCGAAGCCGCCGAAGTGGCAGCCGCCTGCGACGAGATCCCCGGCGCCACCCTGCAGTT CCATGGCGACGAAAGCCCCGCGGCCTGCCAGGAGGCCGCGGGCGCGGGACGGCGGCCCTTCGTTCGCGCAGCCCGCATTC CCCTGGACGCGAACGCGCCGGCGTTCGACCTCGTACAATTCGCCCACCAATACTCACGCGCCCAGGCCATCCTGCTCGAC GCCCATGTCGAAGGCTATGGCGGCGGCGGCAAGGCATTCAATTGGTCACTCCTTCCACCAAGCGTCGGCTCTCACCTCGT TTTATCTGGTGGACTCACGCCTGCAAACGTGACCGATGGCATCTTGCAGGTGCGGCCGCGCGGCCTTTCGCTCGCGGTTG ACGTCAGTTCCGGCGTGGAAGCCGAAGGCCCCGACGGCCGTCCGCTGCGGGGCATCAAGGACGCCGGCAAGATCCAACGC TTCATCGCCGCCGTGCGCGCGGCCGATGGGCATTTTGCGAAGAACGATTGA
Upstream 100 bases:
>100_bases TGATTGGCTGCCCTGACGGCAGGCCCCGCGGCTGAGCCGTGCATTGCCCGGCGCCCGGCGGGCCCGCTACGCGCCTGCGG CAGCCCATCCGCATACCTTC
Downstream 100 bases:
>100_bases TGCTTTCCTACCAACAGCCCGACGCTTCGGGCCACTTCGGCCGCTATGGCGGCAGTTTCGCGAGCGAGACGCTCACGCAT GCCCTCACCGAGCTGCGCGA
Product: phosphoribosylanthranilate isomerase
Products: NA
Alternate protein names: PRAI [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSSPMPSSAPDTPLPESRRGDAPVPRTRIKICGITREQDLDAAVQAGADAVGFVLYPKSQRAVTVQRAAALARRLPPFVT PVLLFVNAEAAEVAAACDEIPGATLQFHGDESPAACQEAAGAGRRPFVRAARIPLDANAPAFDLVQFAHQYSRAQAILLD AHVEGYGGGGKAFNWSLLPPSVGSHLVLSGGLTPANVTDGILQVRPRGLSLAVDVSSGVEAEGPDGRPLRGIKDAGKIQR FIAAVRAADGHFAKND
Sequences:
>Translated_256_residues MSSPMPSSAPDTPLPESRRGDAPVPRTRIKICGITREQDLDAAVQAGADAVGFVLYPKSQRAVTVQRAAALARRLPPFVT PVLLFVNAEAAEVAAACDEIPGATLQFHGDESPAACQEAAGAGRRPFVRAARIPLDANAPAFDLVQFAHQYSRAQAILLD AHVEGYGGGGKAFNWSLLPPSVGSHLVLSGGLTPANVTDGILQVRPRGLSLAVDVSSGVEAEGPDGRPLRGIKDAGKIQR FIAAVRAADGHFAKND >Mature_255_residues SSPMPSSAPDTPLPESRRGDAPVPRTRIKICGITREQDLDAAVQAGADAVGFVLYPKSQRAVTVQRAAALARRLPPFVTP VLLFVNAEAAEVAAACDEIPGATLQFHGDESPAACQEAAGAGRRPFVRAARIPLDANAPAFDLVQFAHQYSRAQAILLDA HVEGYGGGGKAFNWSLLPPSVGSHLVLSGGLTPANVTDGILQVRPRGLSLAVDVSSGVEAEGPDGRPLRGIKDAGKIQRF IAAVRAADGHFAKND
Specific function: Bifunctional Enzyme That Catalyzes Two Sequential Steps Of Tryptophan Biosynthetic Pathway. The First Reaction Is Catalyzed By The Isomerase, Coded By The Trpf Domain; The Second Reaction Is Catalyzed By The Synthase, Coded By The Trpc Domain. [C]
COG id: COG0135
COG function: function code E; Phosphoribosylanthranilate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trpF family [H]
Homologues:
Organism=Escherichia coli, GI87081863, Length=223, Percent_Identity=28.6995515695067, Blast_Score=64, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6320210, Length=236, Percent_Identity=28.8135593220339, Blast_Score=80, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001240 - InterPro: IPR011060 [H]
Pfam domain/function: PF00697 PRAI [H]
EC number: =5.3.1.24 [H]
Molecular weight: Translated: 26695; Mature: 26564
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPMPSSAPDTPLPESRRGDAPVPRTRIKICGITREQDLDAAVQAGADAVGFVLYPKSQ CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCC RAVTVQRAAALARRLPPFVTPVLLFVNAEAAEVAAACDEIPGATLQFHGDESPAACQEAA CEEHHHHHHHHHHHCCHHHHHHHHEECCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH GAGRRPFVRAARIPLDANAPAFDLVQFAHQYSRAQAILLDAHVEGYGGGGKAFNWSLLPP CCCCCCCHHEECCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCEEEEEECCC SVGSHLVLSGGLTPANVTDGILQVRPRGLSLAVDVSSGVEAEGPDGRPLRGIKDAGKIQR CCCCEEEEECCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH FIAAVRAADGHFAKND HHHHHHHCCCCCCCCC >Mature Secondary Structure SSPMPSSAPDTPLPESRRGDAPVPRTRIKICGITREQDLDAAVQAGADAVGFVLYPKSQ CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCC RAVTVQRAAALARRLPPFVTPVLLFVNAEAAEVAAACDEIPGATLQFHGDESPAACQEAA CEEHHHHHHHHHHHCCHHHHHHHHEECCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH GAGRRPFVRAARIPLDANAPAFDLVQFAHQYSRAQAILLDAHVEGYGGGGKAFNWSLLPP CCCCCCCHHEECCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCEEEEEECCC SVGSHLVLSGGLTPANVTDGILQVRPRGLSLAVDVSSGVEAEGPDGRPLRGIKDAGKIQR CCCCEEEEECCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH FIAAVRAADGHFAKND HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA