Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is apaH

Identifier: 120609837

GI number: 120609837

Start: 1263299

End: 1264141

Strand: Reverse

Name: apaH

Synonym: Aave_1149

Alternate gene names: 120609837

Gene position: 1264141-1263299 (Counterclockwise)

Preceding gene: 120609843

Following gene: 120609821

Centisome position: 23.62

GC content: 70.7

Gene sequence:

>843_bases
ATGGCCCTCTACTGCATTGGCGATATTCAAGGCTGCGACGCGGCGCTGCAGCGCCTGCTCGACACCGTGGATTTCTCCCC
CAGCCGCGACACGGTTTATCTGCTGGGAGACCTCGTGAACCGCGGTCCGCAATCGGCGGAAGTGCTGCGGCGCTGTGCCC
GGGGCGGCGACAGCCTCCGCGCCCTGCTCGGAAACCACGACCTGCATTTGCTGGCCGCCGCCCACGGCGCGCGCAAGCCG
TCACGGCGCGACACCCTCGCCGGGGTGCTGCAGGCACCCGACCGGGATGCGCTGCTGGATTGGCTGAAGCGGCAGCCGCT
GGCGCGCGAACACCGGCTGGCGGGCGAACGGCTGCTGATGGTGCACGCGGGCGTGCTGCCCTCCTGGACGGCCGACGCCA
CGTTGGAGCACGCCGCCGAAGTGCAGGCAAGGCTCCAGGGCGATGCGCTGCCGGAATTCCTGCAGGCCATGTACGGCAAT
GCACCGGACCGGTGGAGCGACGAACTGTCCGGCATGGACCGCTGGCGGGCCATCGTGAACGCGCTGACGCGGCTGCGTTT
CTGCACGCCCGACGGCCGCATGGATTTCGACAGCAGCGAGGCGGCGGATGCCGCGCCGGACGGCCTCGTTCCGTGGTTCG
ATGCGCCCGGCAGGCGCACGCGCGGCACGCTGGTGGCATTCGGGCATTGGTCCACGCTCGGCTGGATGAACCGGCCGGAC
CTGCTGGCGCTGGATACGGGCTGTGTCTGGGGAGGCTGCCTCAGCGCCGTGCGGTTCGGTGCCACGCTGGCCGAGCGCGA
GCACATCAGCGTGCGCTGCGAGCAGGCGCAGGCACCTGGCTGA

Upstream 100 bases:

>100_bases
TCTCGAATCCCGCCCTCGCCCCGGCCGCCTGCCAGGGCTTTCTCGCTGAATCACAATAGCGCTCTTCCATAAAACGTGCC
GCCCACGGCCCCATACTCCC

Downstream 100 bases:

>100_bases
GATCCGGGCCCGCCGGAGGCCCGGACGTGCCGCCGGTCACTGGCCGGACGGTGTTTCCACGGCCGGCATGGCGGCCTTGA
AGAGCGCGGCGACCTTGCGC

Product: diadenosine tetraphosphatase

Products: NA

Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MALYCIGDIQGCDAALQRLLDTVDFSPSRDTVYLLGDLVNRGPQSAEVLRRCARGGDSLRALLGNHDLHLLAAAHGARKP
SRRDTLAGVLQAPDRDALLDWLKRQPLAREHRLAGERLLMVHAGVLPSWTADATLEHAAEVQARLQGDALPEFLQAMYGN
APDRWSDELSGMDRWRAIVNALTRLRFCTPDGRMDFDSSEAADAAPDGLVPWFDAPGRRTRGTLVAFGHWSTLGWMNRPD
LLALDTGCVWGGCLSAVRFGATLAEREHISVRCEQAQAPG

Sequences:

>Translated_280_residues
MALYCIGDIQGCDAALQRLLDTVDFSPSRDTVYLLGDLVNRGPQSAEVLRRCARGGDSLRALLGNHDLHLLAAAHGARKP
SRRDTLAGVLQAPDRDALLDWLKRQPLAREHRLAGERLLMVHAGVLPSWTADATLEHAAEVQARLQGDALPEFLQAMYGN
APDRWSDELSGMDRWRAIVNALTRLRFCTPDGRMDFDSSEAADAAPDGLVPWFDAPGRRTRGTLVAFGHWSTLGWMNRPD
LLALDTGCVWGGCLSAVRFGATLAEREHISVRCEQAQAPG
>Mature_279_residues
ALYCIGDIQGCDAALQRLLDTVDFSPSRDTVYLLGDLVNRGPQSAEVLRRCARGGDSLRALLGNHDLHLLAAAHGARKPS
RRDTLAGVLQAPDRDALLDWLKRQPLAREHRLAGERLLMVHAGVLPSWTADATLEHAAEVQARLQGDALPEFLQAMYGNA
PDRWSDELSGMDRWRAIVNALTRLRFCTPDGRMDFDSSEAADAAPDGLVPWFDAPGRRTRGTLVAFGHWSTLGWMNRPDL
LALDTGCVWGGCLSAVRFGATLAEREHISVRCEQAQAPG

Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP

COG id: COG0639

COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Ap4A hydrolase family

Homologues:

Organism=Escherichia coli, GI1786234, Length=260, Percent_Identity=48.0769230769231, Blast_Score=245, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): APAH_ACIAC (A1TLA3)

Other databases:

- EMBL:   CP000512
- RefSeq:   YP_969515.1
- ProteinModelPortal:   A1TLA3
- SMR:   A1TLA3
- STRING:   A1TLA3
- GeneID:   4666753
- GenomeReviews:   CP000512_GR
- KEGG:   aav:Aave_1149
- NMPDR:   fig|397945.5.peg.999
- eggNOG:   COG0639
- HOGENOM:   HBG724457
- OMA:   LVFGHWA
- PhylomeDB:   A1TLA3
- ProtClustDB:   PRK00166
- BioCyc:   AAVE397945:AAVE_1149-MONOMER
- HAMAP:   MF_00199
- InterPro:   IPR004617
- InterPro:   IPR004843
- PIRSF:   PIRSF000903
- TIGRFAMs:   TIGR00668

Pfam domain/function: PF00149 Metallophos

EC number: =3.6.1.41

Molecular weight: Translated: 30655; Mature: 30524

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALYCIGDIQGCDAALQRLLDTVDFSPSRDTVYLLGDLVNRGPQSAEVLRRCARGGDSLR
CEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHCCCHHHH
ALLGNHDLHLLAAAHGARKPSRRDTLAGVLQAPDRDALLDWLKRQPLAREHRLAGERLLM
HHHCCCCEEEEEEHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCEEEE
VHAGVLPSWTADATLEHAAEVQARLQGDALPEFLQAMYGNAPDRWSDELSGMDRWRAIVN
EECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ALTRLRFCTPDGRMDFDSSEAADAAPDGLVPWFDAPGRRTRGTLVAFGHWSTLGWMNRPD
HHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCC
LLALDTGCVWGGCLSAVRFGATLAEREHISVRCEQAQAPG
EEEEECCCHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCC
>Mature Secondary Structure 
ALYCIGDIQGCDAALQRLLDTVDFSPSRDTVYLLGDLVNRGPQSAEVLRRCARGGDSLR
EEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHCCCHHHH
ALLGNHDLHLLAAAHGARKPSRRDTLAGVLQAPDRDALLDWLKRQPLAREHRLAGERLLM
HHHCCCCEEEEEEHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCEEEE
VHAGVLPSWTADATLEHAAEVQARLQGDALPEFLQAMYGNAPDRWSDELSGMDRWRAIVN
EECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ALTRLRFCTPDGRMDFDSSEAADAAPDGLVPWFDAPGRRTRGTLVAFGHWSTLGWMNRPD
HHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCC
LLALDTGCVWGGCLSAVRFGATLAEREHISVRCEQAQAPG
EEEEECCCHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA