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The map label for this gene is nisX1 [H]

Identifier: 120609795

GI number: 120609795

Start: 1209834

End: 1210928

Strand: Reverse

Name: nisX1 [H]

Synonym: Aave_1103

Alternate gene names: 120609795

Gene position: 1210928-1209834 (Counterclockwise)

Preceding gene: 120609796

Following gene: 120609793

Centisome position: 22.62

GC content: 69.68

Gene sequence:

>1095_bases
ATGATCGGCCTGCAAGATCGCCAGCAACTGGCCCGCGACATCCAGATCGCCCACGACAGCGGCGCGCGGCTGCACCTGGC
CTGTCAGGTCGCCGGTATCGACGTGCGCACGCTGCAGCGCTACAAGGCTGCGGGTGGGCTGGCCCAGGGCGATGCACGGC
CTCAGGCGCTGCGCCCCACGCCAAGCCATGCCTTGACCGAGGCCGAACGCCAGCGGCTGGTGCAGGTGGCCAACGCACCG
CGCTTTGCCGACGTGCCGCCGGCGCGCATCGTGCCCATGTTGGCCGACGAGGGTGTCTACCTGGCCAGCGAATCGAGCTT
CGCGCGGGTGCTGCGTGCGCACGGGCAGAACGCCCATCGCGGTCGCGCCCGATCGCCGCAGGCCAGCCGCGCGCCCAGCA
CCCATGTGGCCACGGCGCCCGGCCAGGTGTGGTGCTGGGACATGACCTATCTGCCGGCCCGCGTCGCCGGGCGCTGGTTC
CACCTGTACCTGATCATGGATCTGTACAGCCGCAAGATCGTGGGCTTCGAGGTGCACGACAGCGACCAGGCCGAGCATGC
CGCACGACTGGTGCGCCGCACGGCGCTGGCCGAGGGCATCGCCGCGCGCGCCGACAAGCCAGTGCTGCACGGCGACAACG
GAGCCACGTTGAAGGCCACCACGGTGCTGGCCATGCTGCACTGGTTGGGCGTCAAGCCTTCGTACTCGCGCCCCCGCGTG
AGTGACGACAACGCCTTCGTGGAAAGCCTGTTCCGTACCGCCAAATACCGCCCCGAGTTCCCCGCCAGCGGCGGCTTCGA
CGATCTGGACCAGGCACGCCAGTGGGCCAGCGGCTTCGTGCATTGGTACAACTGCGAGCACCGCCACAGCGCGATCGGCT
ACGTCACGCCGACGCAGCGCCATGCCGGGCAGGACCAGGCCATCCTGCAGGCTCGCCATCACCTTTACACCCAGGCCCGA
CAGCGCAACCCCGCGCGCTGGTCGGGCAGCACCCGCAACTGGGCGCCGGTCCAATCGGTCACGCTCAACCCTGAGCGCGA
CGGCATCTCCAATGCCGCGGCGACCGCATCGAATACGCAGCCTCGGGCTGCTTGA

Upstream 100 bases:

>100_bases
AGCGCGACCTGCGTCGCAAGGACCGGGCACTGGCGGAAACCGCGGCGCTCTTGGTGCTATCAAAAAAGCTCGAGGCGATC
TTGCCCGGGGACGAGGACGA

Downstream 100 bases:

>100_bases
TCGACGCGACAACTACCTTGACATGCTCCGGCCATGAGGCTTCGTAATAATCGAGCCGGTACACATGCCGCGGGCTATAG
TGGCTGCGATCGTACCTTGG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MIGLQDRQQLARDIQIAHDSGARLHLACQVAGIDVRTLQRYKAAGGLAQGDARPQALRPTPSHALTEAERQRLVQVANAP
RFADVPPARIVPMLADEGVYLASESSFARVLRAHGQNAHRGRARSPQASRAPSTHVATAPGQVWCWDMTYLPARVAGRWF
HLYLIMDLYSRKIVGFEVHDSDQAEHAARLVRRTALAEGIAARADKPVLHGDNGATLKATTVLAMLHWLGVKPSYSRPRV
SDDNAFVESLFRTAKYRPEFPASGGFDDLDQARQWASGFVHWYNCEHRHSAIGYVTPTQRHAGQDQAILQARHHLYTQAR
QRNPARWSGSTRNWAPVQSVTLNPERDGISNAAATASNTQPRAA

Sequences:

>Translated_364_residues
MIGLQDRQQLARDIQIAHDSGARLHLACQVAGIDVRTLQRYKAAGGLAQGDARPQALRPTPSHALTEAERQRLVQVANAP
RFADVPPARIVPMLADEGVYLASESSFARVLRAHGQNAHRGRARSPQASRAPSTHVATAPGQVWCWDMTYLPARVAGRWF
HLYLIMDLYSRKIVGFEVHDSDQAEHAARLVRRTALAEGIAARADKPVLHGDNGATLKATTVLAMLHWLGVKPSYSRPRV
SDDNAFVESLFRTAKYRPEFPASGGFDDLDQARQWASGFVHWYNCEHRHSAIGYVTPTQRHAGQDQAILQARHHLYTQAR
QRNPARWSGSTRNWAPVQSVTLNPERDGISNAAATASNTQPRAA
>Mature_364_residues
MIGLQDRQQLARDIQIAHDSGARLHLACQVAGIDVRTLQRYKAAGGLAQGDARPQALRPTPSHALTEAERQRLVQVANAP
RFADVPPARIVPMLADEGVYLASESSFARVLRAHGQNAHRGRARSPQASRAPSTHVATAPGQVWCWDMTYLPARVAGRWF
HLYLIMDLYSRKIVGFEVHDSDQAEHAARLVRRTALAEGIAARADKPVLHGDNGATLKATTVLAMLHWLGVKPSYSRPRV
SDDNAFVESLFRTAKYRPEFPASGGFDDLDQARQWASGFVHWYNCEHRHSAIGYVTPTQRHAGQDQAILQARHHLYTQAR
QRNPARWSGSTRNWAPVQSVTLNPERDGISNAAATASNTQPRAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 40236; Mature: 40236

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGLQDRQQLARDIQIAHDSGARLHLACQVAGIDVRTLQRYKAAGGLAQGDARPQALRPT
CCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCC
PSHALTEAERQRLVQVANAPRFADVPPARIVPMLADEGVYLASESSFARVLRAHGQNAHR
CCHHHHHHHHHHHHHHHCCCCCCCCCHHHEEHHCCCCCEEEECCHHHHHHHHHCCCCCCC
GRARSPQASRAPSTHVATAPGQVWCWDMTYLPARVAGRWFHLYLIMDLYSRKIVGFEVHD
CCCCCCCCCCCCCCCEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
SDQAEHAARLVRRTALAEGIAARADKPVLHGDNGATLKATTVLAMLHWLGVKPSYSRPRV
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCC
SDDNAFVESLFRTAKYRPEFPASGGFDDLDQARQWASGFVHWYNCEHRHSAIGYVTPTQR
CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCEEEECCCCHH
HAGQDQAILQARHHLYTQARQRNPARWSGSTRNWAPVQSVTLNPERDGISNAAATASNTQ
HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCCCCC
PRAA
CCCC
>Mature Secondary Structure
MIGLQDRQQLARDIQIAHDSGARLHLACQVAGIDVRTLQRYKAAGGLAQGDARPQALRPT
CCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCC
PSHALTEAERQRLVQVANAPRFADVPPARIVPMLADEGVYLASESSFARVLRAHGQNAHR
CCHHHHHHHHHHHHHHHCCCCCCCCCHHHEEHHCCCCCEEEECCHHHHHHHHHCCCCCCC
GRARSPQASRAPSTHVATAPGQVWCWDMTYLPARVAGRWFHLYLIMDLYSRKIVGFEVHD
CCCCCCCCCCCCCCCEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
SDQAEHAARLVRRTALAEGIAARADKPVLHGDNGATLKATTVLAMLHWLGVKPSYSRPRV
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCC
SDDNAFVESLFRTAKYRPEFPASGGFDDLDQARQWASGFVHWYNCEHRHSAIGYVTPTQR
CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCEEEECCCCHH
HAGQDQAILQARHHLYTQARQRNPARWSGSTRNWAPVQSVTLNPERDGISNAAATASNTQ
HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCCCCC
PRAA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]