Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is pucI [H]
Identifier: 120609790
GI number: 120609790
Start: 1203346
End: 1204890
Strand: Reverse
Name: pucI [H]
Synonym: Aave_1098
Alternate gene names: 120609790
Gene position: 1204890-1203346 (Counterclockwise)
Preceding gene: 120609791
Following gene: 120609789
Centisome position: 22.51
GC content: 66.93
Gene sequence:
>1545_bases ATGCAATCCGCCACCAGCCCGGCGGGCACCGCAGGCCACGCCGCGATCGCCCAGCCCGCCACGTCCACGTCCACGTCCAC GTCCACGCCTGCGCCCGCCGCCCCGGCCTCGCCCCACGCCGGCAATGCGCTCATCAAGCCCGGCTACGACCCGCGCCTCA CCAACGAGGACCTCGCCCCGCTCAGGAAACAGACCTGGGGCCAGTACAACATCTTCGCGTTCTGGATGTCCGACGTGCAC AGCGTGGGCGGCTATGTCACCGCCGGCAGCCTGTTCGCGCTGGGGCTGTCCAGCTGGCACGTGCTGGCCGCGCTGCTGAT CGGCATCGTCATCGTGCAGATCTTCTGCAACCTGGTGGCCAAGCCCAGCCAGGTGACGGGCGTGCCCTACCCCGTGATCT GCCGCGCCTCGTTCGGCGTGCTGGGCGCCAACATCCCGGCCATCATCCGCGGGCTGATCGCGGTGGCCTGGTACGGCATC CAGACCTACCTGGCCTCCAGCGCCTTCATGATCCTGGCGCTGCATTTCTACCCCTCGCTCGACGCCTATGCCGATGTCAC GCGGCACGGCTTCGCGGGCCTGTCCACGCTGGGCTGGGTGTCGTTCATGGTCATGTGGGTGCTGCAGGCGCTGGTGTTCT GGCACGGCATGGAGGCCATCCGCCGCTTCATCGACTGGGCCGGCCCGGGCGTCTATGTGGTGATGGCCATCCTCTGCGGC TGGCTGGTCTGGAAGGCCGGCTGGAAGAACATCAACCTGAACCTGGGCGGCGTGCGCTTCCAGGGCTGGGACGCGGTGCC GGTGATGCTCTCGGCCATCGCGCTGGTGGTGAGCTACTTCAGCGGCCCGATGCTCAACTTCGGCGACTTCTCCCGCTACG GTAAGAGCTTCGACGCGGTGAAGAAGGGCAATTTCTGGGGCCTGCCGGTCAACTTCGTGTTCTTCTCGCTGCTCACCGTG GTCACCACCGCCGCCACGCTGCCCGTGTTCGGCGAACTCATCACCGACCCGGTCCACACCGTGGGCCGCATCGACTCCAC CACCGCCGTGGTGCTGGGCGCGCTCACCTTCATGATCGCCACCGTGGGCATCAACATCGTGGCCAACTTCGTGTCGCCGG CGTTCGACTTCTCCAACGTGGCGCCGCAGCATATCAGCTGGCGCACGGGCGGCATGATCGCCGCCGTGGGCTCGATCTTC ATCACGCCCTGGAACCTCTACAACAACCCGCAGGTCATCCACTACACGCTGGACATCCTGGGCTCGTTCATCGGCCCGCT GTTCGGCATCCTGATCGCCGACTACTACTTCGTGCGCCGCCAGCAGGTGGCGGTCGATGACCTCTACACCATGCAGCCCG AGGGCCGCTACTGGTACCGGGGCGGCTACAACCCCCGCGCCGTGATGACCATGGTGCCCGCCGCGCTGGTGCCCATCCTG TGCGTGGTCGTGCCGAGCTGGCGCGGCGCCGCCAACTATGCCTGGTTCATCGGCATGGGCCTGGGGCTGGTCATCTACCT CGCACTGAACCGCAAGCAGAACTGA
Upstream 100 bases:
>100_bases AAGCACCGAGCCGCACGGGCGCTCCTGGCCTTTGAATGCATCCATTTTTTGTATACAAATTCGCATGCATTCTGGGAAGC CAACACAAGGAGACAGCCCC
Downstream 100 bases:
>100_bases AACCGAAGAAGGAACGGGCAACGCCCATGCGTATCAAGATCATCAATCCCAACACCACCTGGAGCATGACCGAGAAGATC GGGGCCTGCGCGCGCGCCGT
Product: cytosine/purines, uracil, thiamine, allantoin permease
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MQSATSPAGTAGHAAIAQPATSTSTSTSTPAPAAPASPHAGNALIKPGYDPRLTNEDLAPLRKQTWGQYNIFAFWMSDVH SVGGYVTAGSLFALGLSSWHVLAALLIGIVIVQIFCNLVAKPSQVTGVPYPVICRASFGVLGANIPAIIRGLIAVAWYGI QTYLASSAFMILALHFYPSLDAYADVTRHGFAGLSTLGWVSFMVMWVLQALVFWHGMEAIRRFIDWAGPGVYVVMAILCG WLVWKAGWKNINLNLGGVRFQGWDAVPVMLSAIALVVSYFSGPMLNFGDFSRYGKSFDAVKKGNFWGLPVNFVFFSLLTV VTTAATLPVFGELITDPVHTVGRIDSTTAVVLGALTFMIATVGINIVANFVSPAFDFSNVAPQHISWRTGGMIAAVGSIF ITPWNLYNNPQVIHYTLDILGSFIGPLFGILIADYYFVRRQQVAVDDLYTMQPEGRYWYRGGYNPRAVMTMVPAALVPIL CVVVPSWRGAANYAWFIGMGLGLVIYLALNRKQN
Sequences:
>Translated_514_residues MQSATSPAGTAGHAAIAQPATSTSTSTSTPAPAAPASPHAGNALIKPGYDPRLTNEDLAPLRKQTWGQYNIFAFWMSDVH SVGGYVTAGSLFALGLSSWHVLAALLIGIVIVQIFCNLVAKPSQVTGVPYPVICRASFGVLGANIPAIIRGLIAVAWYGI QTYLASSAFMILALHFYPSLDAYADVTRHGFAGLSTLGWVSFMVMWVLQALVFWHGMEAIRRFIDWAGPGVYVVMAILCG WLVWKAGWKNINLNLGGVRFQGWDAVPVMLSAIALVVSYFSGPMLNFGDFSRYGKSFDAVKKGNFWGLPVNFVFFSLLTV VTTAATLPVFGELITDPVHTVGRIDSTTAVVLGALTFMIATVGINIVANFVSPAFDFSNVAPQHISWRTGGMIAAVGSIF ITPWNLYNNPQVIHYTLDILGSFIGPLFGILIADYYFVRRQQVAVDDLYTMQPEGRYWYRGGYNPRAVMTMVPAALVPIL CVVVPSWRGAANYAWFIGMGLGLVIYLALNRKQN >Mature_514_residues MQSATSPAGTAGHAAIAQPATSTSTSTSTPAPAAPASPHAGNALIKPGYDPRLTNEDLAPLRKQTWGQYNIFAFWMSDVH SVGGYVTAGSLFALGLSSWHVLAALLIGIVIVQIFCNLVAKPSQVTGVPYPVICRASFGVLGANIPAIIRGLIAVAWYGI QTYLASSAFMILALHFYPSLDAYADVTRHGFAGLSTLGWVSFMVMWVLQALVFWHGMEAIRRFIDWAGPGVYVVMAILCG WLVWKAGWKNINLNLGGVRFQGWDAVPVMLSAIALVVSYFSGPMLNFGDFSRYGKSFDAVKKGNFWGLPVNFVFFSLLTV VTTAATLPVFGELITDPVHTVGRIDSTTAVVLGALTFMIATVGINIVANFVSPAFDFSNVAPQHISWRTGGMIAAVGSIF ITPWNLYNNPQVIHYTLDILGSFIGPLFGILIADYYFVRRQQVAVDDLYTMQPEGRYWYRGGYNPRAVMTMVPAALVPIL CVVVPSWRGAANYAWFIGMGLGLVIYLALNRKQN
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=468, Percent_Identity=27.991452991453, Blast_Score=187, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6319495, Length=464, Percent_Identity=25.2155172413793, Blast_Score=137, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6322219, Length=441, Percent_Identity=25.1700680272109, Blast_Score=133, Evalue=7e-32, Organism=Saccharomyces cerevisiae, GI6319429, Length=441, Percent_Identity=26.530612244898, Blast_Score=126, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6324766, Length=438, Percent_Identity=22.8310502283105, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6323266, Length=442, Percent_Identity=22.1719457013575, Blast_Score=98, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6324645, Length=438, Percent_Identity=22.3744292237443, Blast_Score=92, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 55717; Mature: 55717
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSATSPAGTAGHAAIAQPATSTSTSTSTPAPAAPASPHAGNALIKPGYDPRLTNEDLAP CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LRKQTWGQYNIFAFWMSDVHSVGGYVTAGSLFALGLSSWHVLAALLIGIVIVQIFCNLVA HHHHCCCCEEEEEEEHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KPSQVTGVPYPVICRASFGVLGANIPAIIRGLIAVAWYGIQTYLASSAFMILALHFYPSL CCCCCCCCCCCEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DAYADVTRHGFAGLSTLGWVSFMVMWVLQALVFWHGMEAIRRFIDWAGPGVYVVMAILCG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH WLVWKAGWKNINLNLGGVRFQGWDAVPVMLSAIALVVSYFSGPMLNFGDFSRYGKSFDAV HHHHHCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHH KKGNFWGLPVNFVFFSLLTVVTTAATLPVFGELITDPVHTVGRIDSTTAVVLGALTFMIA HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TVGINIVANFVSPAFDFSNVAPQHISWRTGGMIAAVGSIFITPWNLYNNPQVIHYTLDIL HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCEEEEHHHHHH GSFIGPLFGILIADYYFVRRQQVAVDDLYTMQPEGRYWYRGGYNPRAVMTMVPAALVPIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCCHHHHHHHHHHHHHHH CVVVPSWRGAANYAWFIGMGLGLVIYLALNRKQN HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQSATSPAGTAGHAAIAQPATSTSTSTSTPAPAAPASPHAGNALIKPGYDPRLTNEDLAP CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LRKQTWGQYNIFAFWMSDVHSVGGYVTAGSLFALGLSSWHVLAALLIGIVIVQIFCNLVA HHHHCCCCEEEEEEEHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KPSQVTGVPYPVICRASFGVLGANIPAIIRGLIAVAWYGIQTYLASSAFMILALHFYPSL CCCCCCCCCCCEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DAYADVTRHGFAGLSTLGWVSFMVMWVLQALVFWHGMEAIRRFIDWAGPGVYVVMAILCG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH WLVWKAGWKNINLNLGGVRFQGWDAVPVMLSAIALVVSYFSGPMLNFGDFSRYGKSFDAV HHHHHCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHH KKGNFWGLPVNFVFFSLLTVVTTAATLPVFGELITDPVHTVGRIDSTTAVVLGALTFMIA HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TVGINIVANFVSPAFDFSNVAPQHISWRTGGMIAAVGSIFITPWNLYNNPQVIHYTLDIL HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCEEEEHHHHHH GSFIGPLFGILIADYYFVRRQQVAVDDLYTMQPEGRYWYRGGYNPRAVMTMVPAALVPIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCCHHHHHHHHHHHHHHH CVVVPSWRGAANYAWFIGMGLGLVIYLALNRKQN HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]