Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is hyuE [H]
Identifier: 120609789
GI number: 120609789
Start: 1202534
End: 1203319
Strand: Reverse
Name: hyuE [H]
Synonym: Aave_1097
Alternate gene names: 120609789
Gene position: 1203319-1202534 (Counterclockwise)
Preceding gene: 120609790
Following gene: 120609788
Centisome position: 22.48
GC content: 73.54
Gene sequence:
>786_bases ATGCGTATCAAGATCATCAATCCCAACACCACCTGGAGCATGACCGAGAAGATCGGGGCCTGCGCGCGCGCCGTGGCGCG GCCGGGCACCGAGGTCATCGCCGTCAGCCCCGCCATGGGCCCGGCATCCATCGAGAGCCATTACGACGAGGCGCTGGCCG TGCCCGGCCTGCTGCAGGAGATCGCCCGCGGCGAGGAGGGCGGCGTCGATGGCTACGTGATCGCCTGCTTCGGCGACCCC GGCCTGAAGGCCGCGCGCGAGCTGGCACGCGGCCCGGTGGTGGGCATCGCCGAGGCCGCGATGCACCTGGCGAGCATGGT GGGATCGCGCTTCTCGGTGGTGACCACGCTGGGCCGCACCATGGGGCAGGCCTGGCACCTGGCCGAGATCTACGGCATGG AGCGTTTCTGCGCCAACGTGCGCGCCTGCGAGCTGCCGGTGCTGGAACTGGAGGTGCCCGGCTCCGGCGCCCGCGAACGC ATCACGCAAGAGTGCCGGCGCGCGCTGGCCGAGGACGGCTGCGACACCATCGTGCTGGGCTGCGCCGGCATGGCCGACCT GTGCGAGCACATCGGCGGCGTGCTGGGCGTGCCGGTGATCGACGGCGTGGCCGCCGCCACCACGCTGGTCGAATCGCTGG TGACGCTGCGCCTGGCCACCAGCAAGCACGGCGAGCTGGCCCGGCCGCTGCCCAAGGCCATGGCCGGGGCGCTGGCGGAC TTCGCGCTGGGCGCGGCTCCCGCGGTCGCGGCGCCCGCTGCCGCGCCGGCACTGCGGCGCGCCTGA
Upstream 100 bases:
>100_bases CCAACTATGCCTGGTTCATCGGCATGGGCCTGGGGCTGGTCATCTACCTCGCACTGAACCGCAAGCAGAACTGAAACCGA AGAAGGAACGGGCAACGCCC
Downstream 100 bases:
>100_bases TCGCGGCGGGGCCGCGGCCGATGCCGCCCCGCGGCGGTGCCTTTGCGCGGGCAGCCACCGCTTGCCGCGACAATCCCGCC ATGCCCCGCGCCGCCCAGAC
Product: Asp/Glu racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MRIKIINPNTTWSMTEKIGACARAVARPGTEVIAVSPAMGPASIESHYDEALAVPGLLQEIARGEEGGVDGYVIACFGDP GLKAARELARGPVVGIAEAAMHLASMVGSRFSVVTTLGRTMGQAWHLAEIYGMERFCANVRACELPVLELEVPGSGARER ITQECRRALAEDGCDTIVLGCAGMADLCEHIGGVLGVPVIDGVAAATTLVESLVTLRLATSKHGELARPLPKAMAGALAD FALGAAPAVAAPAAAPALRRA
Sequences:
>Translated_261_residues MRIKIINPNTTWSMTEKIGACARAVARPGTEVIAVSPAMGPASIESHYDEALAVPGLLQEIARGEEGGVDGYVIACFGDP GLKAARELARGPVVGIAEAAMHLASMVGSRFSVVTTLGRTMGQAWHLAEIYGMERFCANVRACELPVLELEVPGSGARER ITQECRRALAEDGCDTIVLGCAGMADLCEHIGGVLGVPVIDGVAAATTLVESLVTLRLATSKHGELARPLPKAMAGALAD FALGAAPAVAAPAAAPALRRA >Mature_261_residues MRIKIINPNTTWSMTEKIGACARAVARPGTEVIAVSPAMGPASIESHYDEALAVPGLLQEIARGEEGGVDGYVIACFGDP GLKAARELARGPVVGIAEAAMHLASMVGSRFSVVTTLGRTMGQAWHLAEIYGMERFCANVRACELPVLELEVPGSGARER ITQECRRALAEDGCDTIVLGCAGMADLCEHIGGVLGVPVIDGVAAATTLVESLVTLRLATSKHGELARPLPKAMAGALAD FALGAAPAVAAPAAAPALRRA
Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]
COG id: COG4126
COG function: function code E; Hydantoin racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.99.5 [H]
Molecular weight: Translated: 26904; Mature: 26904
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIKIINPNTTWSMTEKIGACARAVARPGTEVIAVSPAMGPASIESHYDEALAVPGLLQE CEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH IARGEEGGVDGYVIACFGDPGLKAARELARGPVVGIAEAAMHLASMVGSRFSVVTTLGRT HHCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH MGQAWHLAEIYGMERFCANVRACELPVLELEVPGSGARERITQECRRALAEDGCDTIVLG HHHHHHHHHHHHHHHHHCCCHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEE CAGMADLCEHIGGVLGVPVIDGVAAATTLVESLVTLRLATSKHGELARPLPKAMAGALAD CCCHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH FALGAAPAVAAPAAAPALRRA HHHCCCCHHHCCHHCHHHHCC >Mature Secondary Structure MRIKIINPNTTWSMTEKIGACARAVARPGTEVIAVSPAMGPASIESHYDEALAVPGLLQE CEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH IARGEEGGVDGYVIACFGDPGLKAARELARGPVVGIAEAAMHLASMVGSRFSVVTTLGRT HHCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH MGQAWHLAEIYGMERFCANVRACELPVLELEVPGSGARERITQECRRALAEDGCDTIVLG HHHHHHHHHHHHHHHHHCCCHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEE CAGMADLCEHIGGVLGVPVIDGVAAATTLVESLVTLRLATSKHGELARPLPKAMAGALAD CCCHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH FALGAAPAVAAPAAAPALRRA HHHCCCCHHHCCHHCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339422 [H]