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The map label for this gene is tadA [H]

Identifier: 120609775

GI number: 120609775

Start: 1187093

End: 1187602

Strand: Reverse

Name: tadA [H]

Synonym: Aave_1083

Alternate gene names: 120609775

Gene position: 1187602-1187093 (Counterclockwise)

Preceding gene: 120609776

Following gene: 120609774

Centisome position: 22.19

GC content: 71.76

Gene sequence:

>510_bases
ATGAGCGCCATGCCCCTGCCCGAGGAAGTGCCGCTCGACGAGCGCGACGGCCGCTACCTGCGGCACGCCATCGCCCTGGC
GGACAAGGCCCGCGCGCGCGGTAACCGGCCCTTCGGCGCGGTGATCGTGGGCGGCGACGGCACGGTGCTCGCGGAGGCCT
GGAACGCCAACGGAGAAACCGGCGACTGCACGGCGCACGCGGAAACCTCCGCCATCCGCGTGGCGAGCCCGCAGCATGCG
CGCGAGGTCCTGGCCCGCGCCACGCTGTACTCGTCGGGCGAGCCGTGCGTGATGTGCGCGGGCGCCATTTTCTGGGCCAA
CATCGGCCGCGTGGTGTATGGCATCGATGCGGTGCGCCTGCGCGGATTCCGCGGCGAGCGGCAGGACCAGCGCGATGCGG
AACTCTCCTGCCGCGACGTATTCGACGCTTCGCCCCACCCGATCGAATGCATCGGCCCGGCCCTGGTCGCCGAAGCCTGC
GCATCGCACGAAGGCGCCTGGAAAGCCTGA

Upstream 100 bases:

>100_bases
AGATCGACGAAGTGGCCACCGTGTTCCAGCTGGCCGCGAAGCCAGCGCCCGAGCGGGTGTACAACCCCGGCTTCCTGCCC
GCGGGCGCGAAAGGCGCCGC

Downstream 100 bases:

>100_bases
CGCAGGTGTCCGCCGTCCGGCCCCGGGGCTCTGCGGGCCGCGGCTATCATGCGGCGCTCGCTCCAACCCACCAACGACCG
CAAGGCACCCACGACCGATG

Product: CMP/dCMP deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSAMPLPEEVPLDERDGRYLRHAIALADKARARGNRPFGAVIVGGDGTVLAEAWNANGETGDCTAHAETSAIRVASPQHA
REVLARATLYSSGEPCVMCAGAIFWANIGRVVYGIDAVRLRGFRGERQDQRDAELSCRDVFDASPHPIECIGPALVAEAC
ASHEGAWKA

Sequences:

>Translated_169_residues
MSAMPLPEEVPLDERDGRYLRHAIALADKARARGNRPFGAVIVGGDGTVLAEAWNANGETGDCTAHAETSAIRVASPQHA
REVLARATLYSSGEPCVMCAGAIFWANIGRVVYGIDAVRLRGFRGERQDQRDAELSCRDVFDASPHPIECIGPALVAEAC
ASHEGAWKA
>Mature_168_residues
SAMPLPEEVPLDERDGRYLRHAIALADKARARGNRPFGAVIVGGDGTVLAEAWNANGETGDCTAHAETSAIRVASPQHAR
EVLARATLYSSGEPCVMCAGAIFWANIGRVVYGIDAVRLRGFRGERQDQRDAELSCRDVFDASPHPIECIGPALVAEACA
SHEGAWKA

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI145693172, Length=96, Percent_Identity=44.7916666666667, Blast_Score=74, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17541138, Length=119, Percent_Identity=36.1344537815126, Blast_Score=70, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17555996, Length=114, Percent_Identity=35.0877192982456, Blast_Score=62, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 18055; Mature: 17924

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAMPLPEEVPLDERDGRYLRHAIALADKARARGNRPFGAVIVGGDGTVLAEAWNANGET
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCC
GDCTAHAETSAIRVASPQHAREVLARATLYSSGEPCVMCAGAIFWANIGRVVYGIDAVRL
CCEEECCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCHHHHEE
RGFRGERQDQRDAELSCRDVFDASPHPIECIGPALVAEACASHEGAWKA
ECCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SAMPLPEEVPLDERDGRYLRHAIALADKARARGNRPFGAVIVGGDGTVLAEAWNANGET
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCC
GDCTAHAETSAIRVASPQHAREVLARATLYSSGEPCVMCAGAIFWANIGRVVYGIDAVRL
CCEEECCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCHHHHEE
RGFRGERQDQRDAELSCRDVFDASPHPIECIGPALVAEACASHEGAWKA
ECCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]