Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609720
Identifier: 120609720
GI number: 120609720
Start: 1127599
End: 1128033
Strand: Direct
Name: 120609720
Synonym: Aave_1027
Alternate gene names: NA
Gene position: 1127599-1128033 (Clockwise)
Preceding gene: 120609719
Following gene: 120609721
Centisome position: 21.07
GC content: 70.11
Gene sequence:
>435_bases ATGAAGGACCTGCAGGTGGGCGGGCAGTCGCCGGTGCTGGAGCTGGCGCTGGCCGACCTGGCGCTGCAGACCGGGCATGC TGCGGCGATGCGCCAACTGCGCACGGCCGTGGCAGCGCGCATGGATGCCGTGCGGCATGCCATCGCGCAGTCGTTCCCGC CGGGCACGCGGGTGAGCGATCCGTCAGGAGGGCTCCTGCTGTGGGTGGAATTGCCGCGCGGGGCTGGACACCCTGCGGTT GCACCAGGCCTGCAGGGAGCGTATCCTGGTGCCGCCGGGCACCGTGTTCGGCACGGGGGCGCTTCCACAACTGCCTGCGC ATGGGTGTCGGTGGCGACTGGACGGAGCACTCTATGTGGCCGCGCTGTGGAGGGTGGGTGCCATCGCCTGCAGCATGCCC CCGAGGGGGCGTTCAATACAGCCGACTCATCATGA
Upstream 100 bases:
>100_bases AAAATGAGGCTGGTGGTCAATTTCCTCCTCCAAGACGCTCGCGCCCGGGCTGCGGCTTGGCTGGCTGGAAGGCGGGCGCT GGACGGACGCGTTGCGCCAG
Downstream 100 bases:
>100_bases CGCTCGACGCGCCGACCGATTCACAAGAGTTCGTCTTCTTATCATGGTTCTCCCCAAATTCTTATCTGCATTGCTGATAT CGACGATGACGATAACTGCG
Product: GntR family transcriptional regulator
Products: NA
Alternate protein names: GntR Family Transcriptional Regulator
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MKDLQVGGQSPVLELALADLALQTGHAAAMRQLRTAVAARMDAVRHAIAQSFPPGTRVSDPSGGLLLWVELPRGAGHPAV APGLQGAYPGAAGHRVRHGGASTTACAWVSVATGRSTLCGRAVEGGCHRLQHAPEGAFNTADSS
Sequences:
>Translated_144_residues MKDLQVGGQSPVLELALADLALQTGHAAAMRQLRTAVAARMDAVRHAIAQSFPPGTRVSDPSGGLLLWVELPRGAGHPAV APGLQGAYPGAAGHRVRHGGASTTACAWVSVATGRSTLCGRAVEGGCHRLQHAPEGAFNTADSS >Mature_144_residues MKDLQVGGQSPVLELALADLALQTGHAAAMRQLRTAVAARMDAVRHAIAQSFPPGTRVSDPSGGLLLWVELPRGAGHPAV APGLQGAYPGAAGHRVRHGGASTTACAWVSVATGRSTLCGRAVEGGCHRLQHAPEGAFNTADSS
Specific function: Unknown
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14647; Mature: 14647
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLQVGGQSPVLELALADLALQTGHAAAMRQLRTAVAARMDAVRHAIAQSFPPGTRVSD CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PSGGLLLWVELPRGAGHPAVAPGLQGAYPGAAGHRVRHGGASTTACAWVSVATGRSTLCG CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCHHHH RAVEGGCHRLQHAPEGAFNTADSS HHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKDLQVGGQSPVLELALADLALQTGHAAAMRQLRTAVAARMDAVRHAIAQSFPPGTRVSD CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PSGGLLLWVELPRGAGHPAVAPGLQGAYPGAAGHRVRHGGASTTACAWVSVATGRSTLCG CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCHHHH RAVEGGCHRLQHAPEGAFNTADSS HHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA