Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609719
Identifier: 120609719
GI number: 120609719
Start: 1126092
End: 1127456
Strand: Direct
Name: 120609719
Synonym: Aave_1026
Alternate gene names: NA
Gene position: 1126092-1127456 (Clockwise)
Preceding gene: 120609718
Following gene: 120609720
Centisome position: 21.04
GC content: 52.09
Gene sequence:
>1365_bases ATGCGCCTCAAATATAAACCATATGCTTTAGACTGCGCGATCGTTTTGCTGCTTTCTATCGCCATAATTTATCTCTTCTA TCCCGGATTCATGAGCTATGACTCCTGGAAGCAGTTGTATGATGCGAAGAATCGACATATTGGAGATGCCCATCCTCCCA TCATGTCGATGATCTGGCGAGGCCTTGATGCCGTTTATCCCGGTCCGGCCCTCATGCTCATCCTGCAGGTGGCGCTTTTT TCCGTTTCGCTTGCTTTTGTCGCTATCCGTTTGGCGCCGCACCCTGTCGGCCGCCTGCCTTTCCTGCTTTTGTTGATATT TCCTCCCTCGCTGGGGATCATTGGAATCATCTGGAAAGACGTTTGGATGCATGGCTTTCTGTTGGGTTGTCTTGCTGTGG CACTTTATTGTCACCACGCTCAGGGGCGCGCCCGCATTGCTTTATTGGTGGCGTTTTCGGCAATGGCGTTCATGGCGGCG ACTTTTCGTCATAATGCAGTGGCCGCCATTCCACCGTTCGCTATGCTGGCCTTTTATGGAGTTGCCAGTCGACCTACGGT GAGTCGCTTGCGTAATTTCACAGTCACTGCCTTGATTTCGCTTGTTTTCACCGCTGTGGTTTTGTTTGTCAATGGACTGG TTACGCGCGTTCTGGCTGATTACCATGAGAATTTTTCACAAGTCTTGATGACTTTCGACGTGGCTGGGACATCCTCCCTG AGCGGAAGGCGACTATTCAGTTCCGGGTACGCAGACATGGTCGATGACACGGTGACTGTGGCGGACATCCAGGCCCGTTA TACGCCGCGCTTTCATTCCTGCCTTTATAACCCTTGCACTGCGGGTCCAGGGATATTCAGAACGTCAATGAAGCAAAGCG AACTGGACCATTTGCGCAAGGATTGGTTACTTGCAATTGTCACAGAGCCTCGTGCATGGATGGAGCATAAATATCATGTG GCGCGGGAAATAATTCGGCTAGGAACGCTGGAAATTTGGGCCCCGACTCTTGAAGATCCCTTGTTTCCCAATGACTGGGG GATTACCTTCAACGATACGCCCGTCCGCGCTGCATTCCGGAAAATGATCTTTGCCGCTTCGGGCACCTGGATCTACAACA CCTATATGTACTTGGCCGGGGCTGTCGTTGTTGGATTCATGGCTGCTGCCGGTCTTCTCTGGACGCAATGGCCGAGGGCG CAGCTGGCGGCTGCACTGGCCCTTGCCGCAAGCGGAACGCTTTACGAAACATCTCTTTTCTTCGGGGCTACCAGTGCAGA TTTTCGATACTCTGTCTGGCTGATTATTTGTACTTGGCTGGCTATCTGTTCATTTGTCTCAGCCTTGATTGTCGGCCGGC GGTGA
Upstream 100 bases:
>100_bases AAATCCGAATCGCGAGGATATTTTTTTGAATCCGATCTACGGGTCCGGAATTTTTTTTCTGAGATCCTAATTGCTGGTGG TTGCTATAAAATTAAATTCC
Downstream 100 bases:
>100_bases TGTCGCGCGTTTGCTGGAGACGACTGCTGCCGGACTGAACGGAAAATGAGGCTGGTGGTCAATTTCCTCCTCCAAGACGC TCGCGCCCGGGCTGCGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MRLKYKPYALDCAIVLLLSIAIIYLFYPGFMSYDSWKQLYDAKNRHIGDAHPPIMSMIWRGLDAVYPGPALMLILQVALF SVSLAFVAIRLAPHPVGRLPFLLLLIFPPSLGIIGIIWKDVWMHGFLLGCLAVALYCHHAQGRARIALLVAFSAMAFMAA TFRHNAVAAIPPFAMLAFYGVASRPTVSRLRNFTVTALISLVFTAVVLFVNGLVTRVLADYHENFSQVLMTFDVAGTSSL SGRRLFSSGYADMVDDTVTVADIQARYTPRFHSCLYNPCTAGPGIFRTSMKQSELDHLRKDWLLAIVTEPRAWMEHKYHV AREIIRLGTLEIWAPTLEDPLFPNDWGITFNDTPVRAAFRKMIFAASGTWIYNTYMYLAGAVVVGFMAAAGLLWTQWPRA QLAAALALAASGTLYETSLFFGATSADFRYSVWLIICTWLAICSFVSALIVGRR
Sequences:
>Translated_454_residues MRLKYKPYALDCAIVLLLSIAIIYLFYPGFMSYDSWKQLYDAKNRHIGDAHPPIMSMIWRGLDAVYPGPALMLILQVALF SVSLAFVAIRLAPHPVGRLPFLLLLIFPPSLGIIGIIWKDVWMHGFLLGCLAVALYCHHAQGRARIALLVAFSAMAFMAA TFRHNAVAAIPPFAMLAFYGVASRPTVSRLRNFTVTALISLVFTAVVLFVNGLVTRVLADYHENFSQVLMTFDVAGTSSL SGRRLFSSGYADMVDDTVTVADIQARYTPRFHSCLYNPCTAGPGIFRTSMKQSELDHLRKDWLLAIVTEPRAWMEHKYHV AREIIRLGTLEIWAPTLEDPLFPNDWGITFNDTPVRAAFRKMIFAASGTWIYNTYMYLAGAVVVGFMAAAGLLWTQWPRA QLAAALALAASGTLYETSLFFGATSADFRYSVWLIICTWLAICSFVSALIVGRR >Mature_454_residues MRLKYKPYALDCAIVLLLSIAIIYLFYPGFMSYDSWKQLYDAKNRHIGDAHPPIMSMIWRGLDAVYPGPALMLILQVALF SVSLAFVAIRLAPHPVGRLPFLLLLIFPPSLGIIGIIWKDVWMHGFLLGCLAVALYCHHAQGRARIALLVAFSAMAFMAA TFRHNAVAAIPPFAMLAFYGVASRPTVSRLRNFTVTALISLVFTAVVLFVNGLVTRVLADYHENFSQVLMTFDVAGTSSL SGRRLFSSGYADMVDDTVTVADIQARYTPRFHSCLYNPCTAGPGIFRTSMKQSELDHLRKDWLLAIVTEPRAWMEHKYHV AREIIRLGTLEIWAPTLEDPLFPNDWGITFNDTPVRAAFRKMIFAASGTWIYNTYMYLAGAVVVGFMAAAGLLWTQWPRA QLAAALALAASGTLYETSLFFGATSADFRYSVWLIICTWLAICSFVSALIVGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50594; Mature: 50594
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKYKPYALDCAIVLLLSIAIIYLFYPGFMSYDSWKQLYDAKNRHIGDAHPPIMSMIWR CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH GLDAVYPGPALMLILQVALFSVSLAFVAIRLAPHPVGRLPFLLLLIFPPSLGIIGIIWKD HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHH VWMHGFLLGCLAVALYCHHAQGRARIALLVAFSAMAFMAATFRHNAVAAIPPFAMLAFYG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHC VASRPTVSRLRNFTVTALISLVFTAVVLFVNGLVTRVLADYHENFSQVLMTFDVAGTSSL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SGRRLFSSGYADMVDDTVTVADIQARYTPRFHSCLYNPCTAGPGIFRTSMKQSELDHLRK CCCHHHHCCCHHHHCCCEEEEHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH DWLLAIVTEPRAWMEHKYHVAREIIRLGTLEIWAPTLEDPLFPNDWGITFNDTPVRAAFR HHEEEEEECCHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCEECCCHHHHHHH KMIFAASGTWIYNTYMYLAGAVVVGFMAAAGLLWTQWPRAQLAAALALAASGTLYETSLF HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHE FGATSADFRYSVWLIICTWLAICSFVSALIVGRR ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRLKYKPYALDCAIVLLLSIAIIYLFYPGFMSYDSWKQLYDAKNRHIGDAHPPIMSMIWR CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH GLDAVYPGPALMLILQVALFSVSLAFVAIRLAPHPVGRLPFLLLLIFPPSLGIIGIIWKD HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHH VWMHGFLLGCLAVALYCHHAQGRARIALLVAFSAMAFMAATFRHNAVAAIPPFAMLAFYG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHC VASRPTVSRLRNFTVTALISLVFTAVVLFVNGLVTRVLADYHENFSQVLMTFDVAGTSSL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SGRRLFSSGYADMVDDTVTVADIQARYTPRFHSCLYNPCTAGPGIFRTSMKQSELDHLRK CCCHHHHCCCHHHHCCCEEEEHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH DWLLAIVTEPRAWMEHKYHVAREIIRLGTLEIWAPTLEDPLFPNDWGITFNDTPVRAAFR HHEEEEEECCHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCEECCCHHHHHHH KMIFAASGTWIYNTYMYLAGAVVVGFMAAAGLLWTQWPRAQLAAALALAASGTLYETSLF HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHE FGATSADFRYSVWLIICTWLAICSFVSALIVGRR ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA