Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609721
Identifier: 120609721
GI number: 120609721
Start: 1128418
End: 1128930
Strand: Direct
Name: 120609721
Synonym: Aave_1028
Alternate gene names: NA
Gene position: 1128418-1128930 (Clockwise)
Preceding gene: 120609720
Following gene: 120609722
Centisome position: 21.08
GC content: 53.22
Gene sequence:
>513_bases ATGGTTTCAGGCTCGGGAGAGGGTGCGGTATATCATCTGTATTTTTCTGCAGCCGATGGGAAGGAGAGGTCGAAATATTC GGCCATTTACCATTCTTCCAGCCGCGACGGCGCCCAATGGGCCAAACCCGGAAAATTGCTGTCTGACGGCGCGCTCGATC CTGTCGTGATGGAGGATCGTGGCGGCAAGAAATTCATCATATACACCACCTCATTCAAGAGCAAGAACTTCATCAAGATG GCGGATTTGCCGGCGCCGAACGTCGCCGGGAAGAAGCGTGTGTTGTATTCCTCTCCCACAGGCTTTTATACGCTGGGGAA GCTGACGGTGAGTGGCAAACCCATGGTCGTCGTCGAAACCGGCGAAGACTGGATGGCCATGTGCTTCGCGCCAAATGGTC AGCTCGTAAAATCTTCCATAAGACCCCTTTTGCGCTTGAGAAATGGCGAAAGTTCCCAATGGGACGGCCTGAAATATGGA ATGTATTTCACGGATGCCTCCGGAAACCCGTAG
Upstream 100 bases:
>100_bases AGCTCGCCATTGCCGAAGAGGGGAATAATTTGTCGGGCAGGGAAATATTTTCGATGAATCATCGTTGCCTTTTCATGGGG CCTACGCTTTTCCCTTCGTG
Downstream 100 bases:
>100_bases ATTTTCTATAACGGCATCAGAGGCCGGGGAGTGGAAAGTGGCGGTCAGATAGGAGCAGGTACCTACGATGTGACGGCTAT TGCCAAGACGCTGGATACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MVSGSGEGAVYHLYFSAADGKERSKYSAIYHSSSRDGAQWAKPGKLLSDGALDPVVMEDRGGKKFIIYTTSFKSKNFIKM ADLPAPNVAGKKRVLYSSPTGFYTLGKLTVSGKPMVVVETGEDWMAMCFAPNGQLVKSSIRPLLRLRNGESSQWDGLKYG MYFTDASGNP
Sequences:
>Translated_170_residues MVSGSGEGAVYHLYFSAADGKERSKYSAIYHSSSRDGAQWAKPGKLLSDGALDPVVMEDRGGKKFIIYTTSFKSKNFIKM ADLPAPNVAGKKRVLYSSPTGFYTLGKLTVSGKPMVVVETGEDWMAMCFAPNGQLVKSSIRPLLRLRNGESSQWDGLKYG MYFTDASGNP >Mature_170_residues MVSGSGEGAVYHLYFSAADGKERSKYSAIYHSSSRDGAQWAKPGKLLSDGALDPVVMEDRGGKKFIIYTTSFKSKNFIKM ADLPAPNVAGKKRVLYSSPTGFYTLGKLTVSGKPMVVVETGEDWMAMCFAPNGQLVKSSIRPLLRLRNGESSQWDGLKYG MYFTDASGNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18524; Mature: 18524
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSGSGEGAVYHLYFSAADGKERSKYSAIYHSSSRDGAQWAKPGKLLSDGALDPVVMEDR CCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCCCCEEEECC GGKKFIIYTTSFKSKNFIKMADLPAPNVAGKKRVLYSSPTGFYTLGKLTVSGKPMVVVET CCCEEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEC GEDWMAMCFAPNGQLVKSSIRPLLRLRNGESSQWDGLKYGMYFTDASGNP CCCEEEEEECCCCHHHHHHHHHHHEECCCCCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure MVSGSGEGAVYHLYFSAADGKERSKYSAIYHSSSRDGAQWAKPGKLLSDGALDPVVMEDR CCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCCCCEEEECC GGKKFIIYTTSFKSKNFIKMADLPAPNVAGKKRVLYSSPTGFYTLGKLTVSGKPMVVVET CCCEEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEC GEDWMAMCFAPNGQLVKSSIRPLLRLRNGESSQWDGLKYGMYFTDASGNP CCCEEEEEECCCCHHHHHHHHHHHEECCCCCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA