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The map label for this gene is vacJ [C]

Identifier: 120609710

GI number: 120609710

Start: 1117137

End: 1117919

Strand: Direct

Name: vacJ [C]

Synonym: Aave_1016

Alternate gene names: 120609710

Gene position: 1117137-1117919 (Clockwise)

Preceding gene: 120609709

Following gene: 120609711

Centisome position: 20.87

GC content: 68.58

Gene sequence:

>783_bases
ATGACGACAACAATGATGACCACCAATTGCCAAGCTCTCCGGGCCCCGTCCCTGCGCGGCAGCGCCTGCGCGCTGGCCGT
GGCCAGCCTGCTGGCCGGCTGCGCCACCGGGCCCGACGCCAACCCGCGCGATCCGTTCGAGCCCTACAACCGCGGCGTGA
CCCGGTTCAACGACACGGTGGACGACGTGCTGCTGCGGCCCGTCGCCACCGCCTATACCGAGGTCACCCCGCGCCTGGTG
CGCACCGGCGTGAGCAACTTCTTCGCCAACCTCGGGGACCTGTGGTCCTTCGTGAACAATGCGCTGCAACTGCGCGGCGA
GGGCGCGCTCAACAGCATCGCGCGCTTCAGCGCGAACACCGTGTTCGGCATCGGCGGCGTGTTCGACGTCGCCACCGAGA
TGGGCATCGACCGCTCGAAGCAGGATTTCGGCCTCACGCTCGGCCGCTGGGGCGTACCCACGGGGCCGTACCTCGTGCTG
CCGTTCCTGGGCCCGTCCACCGTGCGCGACACGGTGGCCCTGCCGGTGGATGCCAAGGGCAACCTGATCACCTATGTCGA
TCCCGTGTCCGATCGCAACGCCCTCTATGCCCTGCGGGCGGTGGACACGCGAGCCAACCTGCTGCGCGCGAGTTCCGTGC
TGAACAGCGCCGCGCTCGACAAATACAGTTTCACGCGCGACGCCTACCTGCAGGTGCGCAGCCAGGCGGTGCAGAAGGAC
CGGCGCAACGAGGAGCGCTACGACCAGGATGCCGGCAAGCTGCCCGAAGAGCCGAAGCCCTGA

Upstream 100 bases:

>100_bases
CAACGCAGTCCGCGGTGGTGCTGGAAAACCTCATCGGCCAGTTCCTCTACGGCAAGGCCGAAGAGGGCGGCGGCGGGGCC
TCCGCGGGCGGCTCCAAGAA

Downstream 100 bases:

>100_bases
GGGCGGCGGCGGAGGCCGGGGCGGCGTTGCAGTTGCTTGCATCCGTGCACCGGGCAGACGCATGGGGGCGTCGCCCCGCG
TCCACAATGGAACATGACAT

Product: VacJ family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MTTTMMTTNCQALRAPSLRGSACALAVASLLAGCATGPDANPRDPFEPYNRGVTRFNDTVDDVLLRPVATAYTEVTPRLV
RTGVSNFFANLGDLWSFVNNALQLRGEGALNSIARFSANTVFGIGGVFDVATEMGIDRSKQDFGLTLGRWGVPTGPYLVL
PFLGPSTVRDTVALPVDAKGNLITYVDPVSDRNALYALRAVDTRANLLRASSVLNSAALDKYSFTRDAYLQVRSQAVQKD
RRNEERYDQDAGKLPEEPKP

Sequences:

>Translated_260_residues
MTTTMMTTNCQALRAPSLRGSACALAVASLLAGCATGPDANPRDPFEPYNRGVTRFNDTVDDVLLRPVATAYTEVTPRLV
RTGVSNFFANLGDLWSFVNNALQLRGEGALNSIARFSANTVFGIGGVFDVATEMGIDRSKQDFGLTLGRWGVPTGPYLVL
PFLGPSTVRDTVALPVDAKGNLITYVDPVSDRNALYALRAVDTRANLLRASSVLNSAALDKYSFTRDAYLQVRSQAVQKD
RRNEERYDQDAGKLPEEPKP
>Mature_259_residues
TTTMMTTNCQALRAPSLRGSACALAVASLLAGCATGPDANPRDPFEPYNRGVTRFNDTVDDVLLRPVATAYTEVTPRLVR
TGVSNFFANLGDLWSFVNNALQLRGEGALNSIARFSANTVFGIGGVFDVATEMGIDRSKQDFGLTLGRWGVPTGPYLVLP
FLGPSTVRDTVALPVDAKGNLITYVDPVSDRNALYALRAVDTRANLLRASSVLNSAALDKYSFTRDAYLQVRSQAVQKDR
RNEERYDQDAGKLPEEPKP

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=222, Percent_Identity=37.3873873873874, Blast_Score=114, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 28212; Mature: 28081

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTMMTTNCQALRAPSLRGSACALAVASLLAGCATGPDANPRDPFEPYNRGVTRFNDTV
CCCEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHH
DDVLLRPVATAYTEVTPRLVRTGVSNFFANLGDLWSFVNNALQLRGEGALNSIARFSANT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
VFGIGGVFDVATEMGIDRSKQDFGLTLGRWGVPTGPYLVLPFLGPSTVRDTVALPVDAKG
EEECCHHHHHHHHHCCCCCCHHHCCEECCCCCCCCCEEEEECCCCCHHHHCEEECCCCCC
NLITYVDPVSDRNALYALRAVDTRANLLRASSVLNSAALDKYSFTRDAYLQVRSQAVQKD
CEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RRNEERYDQDAGKLPEEPKP
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TTTMMTTNCQALRAPSLRGSACALAVASLLAGCATGPDANPRDPFEPYNRGVTRFNDTV
CCEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHH
DDVLLRPVATAYTEVTPRLVRTGVSNFFANLGDLWSFVNNALQLRGEGALNSIARFSANT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
VFGIGGVFDVATEMGIDRSKQDFGLTLGRWGVPTGPYLVLPFLGPSTVRDTVALPVDAKG
EEECCHHHHHHHHHCCCCCCHHHCCEECCCCCCCCCEEEEECCCCCHHHHCEEECCCCCC
NLITYVDPVSDRNALYALRAVDTRANLLRASSVLNSAALDKYSFTRDAYLQVRSQAVQKD
CEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RRNEERYDQDAGKLPEEPKP
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA