Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is mlaC [H]
Identifier: 120609711
GI number: 120609711
Start: 1118062
End: 1118718
Strand: Direct
Name: mlaC [H]
Synonym: Aave_1017
Alternate gene names: 120609711
Gene position: 1118062-1118718 (Clockwise)
Preceding gene: 120609710
Following gene: 120609712
Centisome position: 20.89
GC content: 67.43
Gene sequence:
>657_bases ATGACGATGAGCCGACGTACCCTGGGCCATGCCGCCCTCTGCACTGCCGCCGTTCTGTGGCTGGGCATGCCGGTGGCGGC CCTGGCCGCCGACGAAACGCCCGACGAACTGATCAAGCGCCTGTCCACCGACGTGCTGAACACCGTGCGCAGCGACAAGA GCATCAAGTCGGGCGACATCAACAAGATCACCGCGCTGGTGGACAAGGTCATCCTGCCGCACGTGAACTTCCGCCGCATG ACAGCCGCCGCGGTGGGCCCGGCCTGGCGCCAGGCCACGCCGCAGCAGCAGACGCGCCTGCAGGACGAATTCAAGTCGCT GCTCGTGCGCACCTACTCGGGCGCCCTCAACCAGGTCAACGACCTGTCGATCCAGGTCAAGCCGCTGCGCGCCGGCGCCG ACGACAAGGACGTGCTCGTGCGTTCCGAGATCCTGGGCCGCGGCGACCCTATCCAGCTCGACTACCGCCTGGAGAAGACC CCGGGCGACGGCGCGGGCTGGAAGATCTACAACCTGAACGTGATGGGCGTGTGGCTGGTCGAGACCTACCGCACGCAGTT CGCGCAGGAGATCAACGCCAAGGGCATCGATGGCCTCATCGAATCCCTGGCGGCGCGCAACAAGGCCAACGCCGCCGGCT CCGGCAAGGCGGGCTGA
Upstream 100 bases:
>100_bases CCGTGCACCGGGCAGACGCATGGGGGCGTCGCCCCGCGTCCACAATGGAACATGACATGGCGCGCCCCGCCGGGGACGCG CCTTCAGAAAGGAAACCGAT
Downstream 100 bases:
>100_bases CGCATCCATCGGGCGGCCGCCATGCTGGTCCTACCCACCGAGCTGACGCACCGACAGGCCGAGGCCTGCCTTCGCATGCT GCTGCAGGGGCTCAAGGCGC
Product: toluene tolerance family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTMSRRTLGHAALCTAAVLWLGMPVAALAADETPDELIKRLSTDVLNTVRSDKSIKSGDINKITALVDKVILPHVNFRRM TAAAVGPAWRQATPQQQTRLQDEFKSLLVRTYSGALNQVNDLSIQVKPLRAGADDKDVLVRSEILGRGDPIQLDYRLEKT PGDGAGWKIYNLNVMGVWLVETYRTQFAQEINAKGIDGLIESLAARNKANAAGSGKAG
Sequences:
>Translated_218_residues MTMSRRTLGHAALCTAAVLWLGMPVAALAADETPDELIKRLSTDVLNTVRSDKSIKSGDINKITALVDKVILPHVNFRRM TAAAVGPAWRQATPQQQTRLQDEFKSLLVRTYSGALNQVNDLSIQVKPLRAGADDKDVLVRSEILGRGDPIQLDYRLEKT PGDGAGWKIYNLNVMGVWLVETYRTQFAQEINAKGIDGLIESLAARNKANAAGSGKAG >Mature_217_residues TMSRRTLGHAALCTAAVLWLGMPVAALAADETPDELIKRLSTDVLNTVRSDKSIKSGDINKITALVDKVILPHVNFRRMT AAAVGPAWRQATPQQQTRLQDEFKSLLVRTYSGALNQVNDLSIQVKPLRAGADDKDVLVRSEILGRGDPIQLDYRLEKTP GDGAGWKIYNLNVMGVWLVETYRTQFAQEINAKGIDGLIESLAARNKANAAGSGKAG
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane. May transfer phospholipid across the peripl
COG id: COG2854
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaC/ttg2D family [H]
Homologues:
Organism=Escherichia coli, GI1789583, Length=195, Percent_Identity=26.6666666666667, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023094 - InterPro: IPR008869 [H]
Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]
EC number: NA
Molecular weight: Translated: 23710; Mature: 23578
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSRRTLGHAALCTAAVLWLGMPVAALAADETPDELIKRLSTDVLNTVRSDKSIKSGDI CCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH NKITALVDKVILPHVNFRRMTAAAVGPAWRQATPQQQTRLQDEFKSLLVRTYSGALNQVN HHHHHHHHHHHHCCCCHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC DLSIQVKPLRAGADDKDVLVRSEILGRGDPIQLDYRLEKTPGDGAGWKIYNLNVMGVWLV CCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEHHHH ETYRTQFAQEINAKGIDGLIESLAARNKANAAGSGKAG HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TMSRRTLGHAALCTAAVLWLGMPVAALAADETPDELIKRLSTDVLNTVRSDKSIKSGDI CCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH NKITALVDKVILPHVNFRRMTAAAVGPAWRQATPQQQTRLQDEFKSLLVRTYSGALNQVN HHHHHHHHHHHHCCCCHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC DLSIQVKPLRAGADDKDVLVRSEILGRGDPIQLDYRLEKTPGDGAGWKIYNLNVMGVWLV CCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEHHHH ETYRTQFAQEINAKGIDGLIESLAARNKANAAGSGKAG HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]