Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is aroK
Identifier: 120609696
GI number: 120609696
Start: 1100031
End: 1100582
Strand: Direct
Name: aroK
Synonym: Aave_1002
Alternate gene names: 120609696
Gene position: 1100031-1100582 (Clockwise)
Preceding gene: 120609695
Following gene: 120609697
Centisome position: 20.55
GC content: 67.57
Gene sequence:
>552_bases TTGCGCGGACCCCAACTGAGCATCCACCTCATCGGCCTTCCAGGCTCGGGTAAATCCACCGTCGGGCGACATCTCGCCCG GCGGCTGGGCCTGCCCTTCATCGATTCGGACCACGTGATCGAGCAGCGCATCGGCGGCTCGATCCGTGGTTTTTTCGATC GTGAAGGCGAAGCCGCCTTCCGTGACCTGGAGGAGGAGGTCATCCTCGAGCTGACGGAGGCGAACGTGCCGCCCCAGGTG CTGGCCACGGGCGGCGGGGTCGTGATACGTCCCGGCAACCGGACACGCCTGCGTGAGCGGGGCACGGTCGTTTACCTCAA CGCTTCGCCGGAGGAAATCTTCCGGCACATCCGCCACGACCAGACGCGGCCCCTGCTGCAGGTGGGTTCGCCGCTGGACC GGCTCCGCGAACTGCAGCGCGAGAGGGACCCGCTCTACCGGGAGGCGGCCCATTTCGTCATCTCGCCGGAGCGCGGCAAG AACGTGGCGGCCCTGGTCCAGCACATCGCCATGCAGCTGGAGCTGGCAGGCATCCGTCCGCCATCCCCATGA
Upstream 100 bases:
>100_bases GCACGTTCTTCAGCTTCTTCACGGGGGCACCGTCTTCCGACATGACGAACGCGCAGGTGCCTCCCGCCTCGCAGGTCAGT CCTTTCGGCAGCATCAACAA
Downstream 100 bases:
>100_bases AGACCTGACGGAAGCCGATAGACTCCACGGCATGACTGCCGACGCATTTTCCGTTCGAGACACCGACCGGTCCCTTCCGT CCTCCCATACCGGCGCCGCC
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MRGPQLSIHLIGLPGSGKSTVGRHLARRLGLPFIDSDHVIEQRIGGSIRGFFDREGEAAFRDLEEEVILELTEANVPPQV LATGGGVVIRPGNRTRLRERGTVVYLNASPEEIFRHIRHDQTRPLLQVGSPLDRLRELQRERDPLYREAAHFVISPERGK NVAALVQHIAMQLELAGIRPPSP
Sequences:
>Translated_183_residues MRGPQLSIHLIGLPGSGKSTVGRHLARRLGLPFIDSDHVIEQRIGGSIRGFFDREGEAAFRDLEEEVILELTEANVPPQV LATGGGVVIRPGNRTRLRERGTVVYLNASPEEIFRHIRHDQTRPLLQVGSPLDRLRELQRERDPLYREAAHFVISPERGK NVAALVQHIAMQLELAGIRPPSP >Mature_183_residues MRGPQLSIHLIGLPGSGKSTVGRHLARRLGLPFIDSDHVIEQRIGGSIRGFFDREGEAAFRDLEEEVILELTEANVPPQV LATGGGVVIRPGNRTRLRERGTVVYLNASPEEIFRHIRHDQTRPLLQVGSPLDRLRELQRERDPLYREAAHFVISPERGK NVAALVQHIAMQLELAGIRPPSP
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=166, Percent_Identity=45.7831325301205, Blast_Score=123, Evalue=7e-30, Organism=Escherichia coli, GI1786587, Length=151, Percent_Identity=35.7615894039735, Blast_Score=88, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6320332, Length=152, Percent_Identity=27.6315789473684, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_ACIAC (A1TKW2)
Other databases:
- EMBL: CP000512 - RefSeq: YP_969374.1 - ProteinModelPortal: A1TKW2 - SMR: A1TKW2 - STRING: A1TKW2 - GeneID: 4666908 - GenomeReviews: CP000512_GR - KEGG: aav:Aave_1002 - eggNOG: COG0703 - HOGENOM: HBG335815 - OMA: VIYLRAN - PhylomeDB: A1TKW2 - BioCyc: AAVE397945:AAVE_1002-MONOMER - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 20418; Mature: 20418
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 37-37 BINDING 61-61 BINDING 85-85 BINDING 123-123 BINDING 142-142
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGPQLSIHLIGLPGSGKSTVGRHLARRLGLPFIDSDHVIEQRIGGSIRGFFDREGEAAF CCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHH RDLEEEVILELTEANVPPQVLATGGGVVIRPGNRTRLRERGTVVYLNASPEEIFRHIRHD HHHHHHHHHHHHCCCCCHHEEECCCCEEEECCCCCHHHHCCCEEEEECCHHHHHHHHHCC QTRPLLQVGSPLDRLRELQRERDPLYREAAHFVISPERGKNVAALVQHIAMQLELAGIRP CCCCHHHHCCHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCC PSP CCC >Mature Secondary Structure MRGPQLSIHLIGLPGSGKSTVGRHLARRLGLPFIDSDHVIEQRIGGSIRGFFDREGEAAF CCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHH RDLEEEVILELTEANVPPQVLATGGGVVIRPGNRTRLRERGTVVYLNASPEEIFRHIRHD HHHHHHHHHHHHCCCCCHHEEECCCCEEEECCCCCHHHHCCCEEEEECCHHHHHHHHHCC QTRPLLQVGSPLDRLRELQRERDPLYREAAHFVISPERGKNVAALVQHIAMQLELAGIRP CCCCHHHHCCHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCC PSP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA