Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yeeJ [C]
Identifier: 120609695
GI number: 120609695
Start: 1098205
End: 1100049
Strand: Direct
Name: yeeJ [C]
Synonym: Aave_1001
Alternate gene names: 120609695
Gene position: 1098205-1100049 (Clockwise)
Preceding gene: 120609694
Following gene: 120609696
Centisome position: 20.52
GC content: 66.56
Gene sequence:
>1845_bases ATGAAAGCATTGATGAGAGCCATCGCGTTGACGCTGGCTGCCACGCTTGCAGCGTGTGGAGGAGGTGGCGGGAGCGGCGG GAGCAGCGGCGGCGGAAGCGGCGGCGGCACCACGACGCCGAACGTGGCATCCATCGAGGTCCTGACCTCGGCGACCACGC TGGCATCCGCCGATGCCACGGGCGTGACGGTCACGGCCGTGCTGAAGGACGCAGCCAACAACGCCATCGCGTCCAAGCCG GTGACCTTCAGTGCGAGCAGCGGCACGCTGGCCAGCGCGGCGGCCTCCACCGGTGCGGACGGCCGCGCCACGGCCACCCT CACCGCCGGCACGGACCGTTCCAACCGCGACATCGTGGTGACGGTGGCATCGGGCTCCGTCACGCAGAAGGCGACCATTC CGGTCTCGGGCACCACGCTGACGGCATCGGGTGCCACGTCCATGCTGACGGGCGCAACGACCAACTTCGCCGTGTCCTTG CGCGACAGCGGCGGGGCCGCTCTTCCCGGCGTTGCGGTGACTGCTTCATCGTCGCTGGGCAATGCGGTTACTGCCAGCAG CGCCACGACGGACACCAATGGTTCGGTGACGCTGGCCTATGCAGCCACCCGCAGCGGCACGGACACGCTGACCATCCAGG GCGCTGGGGCGTCGCAGGCGCTCACGATCAATGTCAGCAGCGTGAATTTCGCCTTCTCGGCCCCCGCTGCCAACACGGAG GTCGAGGTCAACAGCACCCGCACGGTGACAGTGCGCTACCTGTCGGGCAATGCCGGAGTGGCGGGCAAGGTCATTTCGTT CGGCACGACCCGCGGGACCGTGACGCCCACGCAGGCGGTGACCGACGCGAATGGTTCGGCCACGGTGCAGGTGACTTCCC CGTCGGTGGGCATCGCCACGGTGAGCGCCCGCGTGGATGACAACGCCATCACGACCCTGCCGCTGAATTTCGTGGCTTCC ACGCCCGCGACCCTGGTCCTGCAGACTTCGTCGGCAGCCCTGGCACCCAACCCGGCCGGCAGCAGCACCAGCCAGGTGCA ACTGCGCGCCACCGTGCGCGACGCTGCCGGCAATGCCGTCAAGGGCAAGACCGTGTTCTTCACCGTGGTGCAGGACCTGA GCGGCGGCGCCATCAAGACGGGCACGGCAGTCACCGATGCCAACGGACTGGCGACGGATGTGTTCGTGGCCGGCGCCACC TCGACTGCTGCCAATGGCGTGCAGATCCGCGCCAGCGTGGCCAACACCAACATCAGTGCCGTGTCGTCCCTGACGGTGAG CAACCAGGCGCTCTTCATCTCCATCGCGGCCAACAACCAGATCGAGAAGCTGACGACCACGTACCGCAATACGTTCTCCG TGCAGGTCACGGATGCCACCGGCGCGCCGGTGGCCAACCAGAATGTGGCGCTGTCGTACTGGGCTCCGCTGTATGGCAAG GGTACTCTGCTCTTCGACAAGACCAACAATGTCTGGACCTACAGGGACAATCCCCCGGCCTTCTGCTTCAATGAAGATGC CAATCGCAACGGCATTCTCGATCCGGGCGAGGACCGGGACGGCAACGGCCGCCTGAGCCCGGGGCTGCCGGCTGCCATTG CGCCGGCTTCCGTGACCACGGATGCCACCGGCAGCGCAACCTTCACGCTGACCTTTGGGCAGCAATATGCCAATTGGCTG CAGATCGAGCTGGCTGCCAGGGCCATCGTTGCGGGCACGGAATCCAGCACGTTCTTCAGCTTCTTCACGGGGGCACCGTC TTCCGACATGACGAACGCGCAGGTGCCTCCCGCCTCGCAGGTCAGTCCTTTCGGCAGCATCAACAATTGCGCGGACCCCA ACTGA
Upstream 100 bases:
>100_bases GGACCCGTGAGTCCACCAAGCGCGAAATGCTGGTGTTCATCACGCCGAAGGTGATTTCGGACAAAGGTCCGGTCCGTTAA AAGCAAATGAAGGTGAACGA
Downstream 100 bases:
>100_bases GCATCCACCTCATCGGCCTTCCAGGCTCGGGTAAATCCACCGTCGGGCGACATCTCGCCCGGCGGCTGGGCCTGCCCTTC ATCGATTCGGACCACGTGAT
Product: Ig domain-containing protein
Products: NA
Alternate protein names: Invasin Domain Protein; Ig Domain Domain Protein
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MKALMRAIALTLAATLAACGGGGGSGGSSGGGSGGGTTTPNVASIEVLTSATTLASADATGVTVTAVLKDAANNAIASKP VTFSASSGTLASAAASTGADGRATATLTAGTDRSNRDIVVTVASGSVTQKATIPVSGTTLTASGATSMLTGATTNFAVSL RDSGGAALPGVAVTASSSLGNAVTASSATTDTNGSVTLAYAATRSGTDTLTIQGAGASQALTINVSSVNFAFSAPAANTE VEVNSTRTVTVRYLSGNAGVAGKVISFGTTRGTVTPTQAVTDANGSATVQVTSPSVGIATVSARVDDNAITTLPLNFVAS TPATLVLQTSSAALAPNPAGSSTSQVQLRATVRDAAGNAVKGKTVFFTVVQDLSGGAIKTGTAVTDANGLATDVFVAGAT STAANGVQIRASVANTNISAVSSLTVSNQALFISIAANNQIEKLTTTYRNTFSVQVTDATGAPVANQNVALSYWAPLYGK GTLLFDKTNNVWTYRDNPPAFCFNEDANRNGILDPGEDRDGNGRLSPGLPAAIAPASVTTDATGSATFTLTFGQQYANWL QIELAARAIVAGTESSTFFSFFTGAPSSDMTNAQVPPASQVSPFGSINNCADPN
Sequences:
>Translated_614_residues MKALMRAIALTLAATLAACGGGGGSGGSSGGGSGGGTTTPNVASIEVLTSATTLASADATGVTVTAVLKDAANNAIASKP VTFSASSGTLASAAASTGADGRATATLTAGTDRSNRDIVVTVASGSVTQKATIPVSGTTLTASGATSMLTGATTNFAVSL RDSGGAALPGVAVTASSSLGNAVTASSATTDTNGSVTLAYAATRSGTDTLTIQGAGASQALTINVSSVNFAFSAPAANTE VEVNSTRTVTVRYLSGNAGVAGKVISFGTTRGTVTPTQAVTDANGSATVQVTSPSVGIATVSARVDDNAITTLPLNFVAS TPATLVLQTSSAALAPNPAGSSTSQVQLRATVRDAAGNAVKGKTVFFTVVQDLSGGAIKTGTAVTDANGLATDVFVAGAT STAANGVQIRASVANTNISAVSSLTVSNQALFISIAANNQIEKLTTTYRNTFSVQVTDATGAPVANQNVALSYWAPLYGK GTLLFDKTNNVWTYRDNPPAFCFNEDANRNGILDPGEDRDGNGRLSPGLPAAIAPASVTTDATGSATFTLTFGQQYANWL QIELAARAIVAGTESSTFFSFFTGAPSSDMTNAQVPPASQVSPFGSINNCADPN >Mature_614_residues MKALMRAIALTLAATLAACGGGGGSGGSSGGGSGGGTTTPNVASIEVLTSATTLASADATGVTVTAVLKDAANNAIASKP VTFSASSGTLASAAASTGADGRATATLTAGTDRSNRDIVVTVASGSVTQKATIPVSGTTLTASGATSMLTGATTNFAVSL RDSGGAALPGVAVTASSSLGNAVTASSATTDTNGSVTLAYAATRSGTDTLTIQGAGASQALTINVSSVNFAFSAPAANTE VEVNSTRTVTVRYLSGNAGVAGKVISFGTTRGTVTPTQAVTDANGSATVQVTSPSVGIATVSARVDDNAITTLPLNFVAS TPATLVLQTSSAALAPNPAGSSTSQVQLRATVRDAAGNAVKGKTVFFTVVQDLSGGAIKTGTAVTDANGLATDVFVAGAT STAANGVQIRASVANTNISAVSSLTVSNQALFISIAANNQIEKLTTTYRNTFSVQVTDATGAPVANQNVALSYWAPLYGK GTLLFDKTNNVWTYRDNPPAFCFNEDANRNGILDPGEDRDGNGRLSPGLPAAIAPASVTTDATGSATFTLTFGQQYANWL QIELAARAIVAGTESSTFFSFFTGAPSSDMTNAQVPPASQVSPFGSINNCADPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60720; Mature: 60720
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51127 BIG1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALMRAIALTLAATLAACGGGGGSGGSSGGGSGGGTTTPNVASIEVLTSATTLASADAT CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECEEEECCCCCC GVTVTAVLKDAANNAIASKPVTFSASSGTLASAAASTGADGRATATLTAGTDRSNRDIVV CEEEEEEEHHHCCCCCCCCCEEEECCCCCEEHHHHCCCCCCCEEEEEEECCCCCCCEEEE TVASGSVTQKATIPVSGTTLTASGATSMLTGATTNFAVSLRDSGGAALPGVAVTASSSLG EECCCCCEEEEEEEECCCEEEECCCCCEEECCCCEEEEEEECCCCCCCCCEEEEECCCCC NAVTASSATTDTNGSVTLAYAATRSGTDTLTIQGAGASQALTINVSSVNFAFSAPAANTE CEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCE VEVNSTRTVTVRYLSGNAGVAGKVISFGTTRGTVTPTQAVTDANGSATVQVTSPSVGIAT EEECCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEECCCCCEEEEEECCCCEEEE VSARVDDNAITTLPLNFVASTPATLVLQTSSAALAPNPAGSSTSQVQLRATVRDAAGNAV EEEEECCCEEEEEEEEEECCCCEEEEEEECCCEECCCCCCCCCCEEEEEEEEECCCCCCC KGKTVFFTVVQDLSGGAIKTGTAVTDANGLATDVFVAGATSTAANGVQIRASVANTNISA CCCEEEEEEEECCCCCEEECCCEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCCEEH VSSLTVSNQALFISIAANNQIEKLTTTYRNTFSVQVTDATGAPVANQNVALSYWAPLYGK EEEEEECCCEEEEEEECCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEEEECCCCCC GTLLFDKTNNVWTYRDNPPAFCFNEDANRNGILDPGEDRDGNGRLSPGLPAAIAPASVTT EEEEEECCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEC DATGSATFTLTFGQQYANWLQIELAARAIVAGTESSTFFSFFTGAPSSDMTNAQVPPASQ CCCCCEEEEEEECCCCCCEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCC VSPFGSINNCADPN CCCCCCCCCCCCCC >Mature Secondary Structure MKALMRAIALTLAATLAACGGGGGSGGSSGGGSGGGTTTPNVASIEVLTSATTLASADAT CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECEEEECCCCCC GVTVTAVLKDAANNAIASKPVTFSASSGTLASAAASTGADGRATATLTAGTDRSNRDIVV CEEEEEEEHHHCCCCCCCCCEEEECCCCCEEHHHHCCCCCCCEEEEEEECCCCCCCEEEE TVASGSVTQKATIPVSGTTLTASGATSMLTGATTNFAVSLRDSGGAALPGVAVTASSSLG EECCCCCEEEEEEEECCCEEEECCCCCEEECCCCEEEEEEECCCCCCCCCEEEEECCCCC NAVTASSATTDTNGSVTLAYAATRSGTDTLTIQGAGASQALTINVSSVNFAFSAPAANTE CEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCE VEVNSTRTVTVRYLSGNAGVAGKVISFGTTRGTVTPTQAVTDANGSATVQVTSPSVGIAT EEECCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEECCCCCEEEEEECCCCEEEE VSARVDDNAITTLPLNFVASTPATLVLQTSSAALAPNPAGSSTSQVQLRATVRDAAGNAV EEEEECCCEEEEEEEEEECCCCEEEEEEECCCEECCCCCCCCCCEEEEEEEEECCCCCCC KGKTVFFTVVQDLSGGAIKTGTAVTDANGLATDVFVAGATSTAANGVQIRASVANTNISA CCCEEEEEEEECCCCCEEECCCEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCCEEH VSSLTVSNQALFISIAANNQIEKLTTTYRNTFSVQVTDATGAPVANQNVALSYWAPLYGK EEEEEECCCEEEEEEECCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEEEECCCCCC GTLLFDKTNNVWTYRDNPPAFCFNEDANRNGILDPGEDRDGNGRLSPGLPAAIAPASVTT EEEEEECCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEC DATGSATFTLTFGQQYANWLQIELAARAIVAGTESSTFFSFFTGAPSSDMTNAQVPPASQ CCCCCEEEEEEECCCCCCEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCC VSPFGSINNCADPN CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA