Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is yeeJ [C]

Identifier: 120609695

GI number: 120609695

Start: 1098205

End: 1100049

Strand: Direct

Name: yeeJ [C]

Synonym: Aave_1001

Alternate gene names: 120609695

Gene position: 1098205-1100049 (Clockwise)

Preceding gene: 120609694

Following gene: 120609696

Centisome position: 20.52

GC content: 66.56

Gene sequence:

>1845_bases
ATGAAAGCATTGATGAGAGCCATCGCGTTGACGCTGGCTGCCACGCTTGCAGCGTGTGGAGGAGGTGGCGGGAGCGGCGG
GAGCAGCGGCGGCGGAAGCGGCGGCGGCACCACGACGCCGAACGTGGCATCCATCGAGGTCCTGACCTCGGCGACCACGC
TGGCATCCGCCGATGCCACGGGCGTGACGGTCACGGCCGTGCTGAAGGACGCAGCCAACAACGCCATCGCGTCCAAGCCG
GTGACCTTCAGTGCGAGCAGCGGCACGCTGGCCAGCGCGGCGGCCTCCACCGGTGCGGACGGCCGCGCCACGGCCACCCT
CACCGCCGGCACGGACCGTTCCAACCGCGACATCGTGGTGACGGTGGCATCGGGCTCCGTCACGCAGAAGGCGACCATTC
CGGTCTCGGGCACCACGCTGACGGCATCGGGTGCCACGTCCATGCTGACGGGCGCAACGACCAACTTCGCCGTGTCCTTG
CGCGACAGCGGCGGGGCCGCTCTTCCCGGCGTTGCGGTGACTGCTTCATCGTCGCTGGGCAATGCGGTTACTGCCAGCAG
CGCCACGACGGACACCAATGGTTCGGTGACGCTGGCCTATGCAGCCACCCGCAGCGGCACGGACACGCTGACCATCCAGG
GCGCTGGGGCGTCGCAGGCGCTCACGATCAATGTCAGCAGCGTGAATTTCGCCTTCTCGGCCCCCGCTGCCAACACGGAG
GTCGAGGTCAACAGCACCCGCACGGTGACAGTGCGCTACCTGTCGGGCAATGCCGGAGTGGCGGGCAAGGTCATTTCGTT
CGGCACGACCCGCGGGACCGTGACGCCCACGCAGGCGGTGACCGACGCGAATGGTTCGGCCACGGTGCAGGTGACTTCCC
CGTCGGTGGGCATCGCCACGGTGAGCGCCCGCGTGGATGACAACGCCATCACGACCCTGCCGCTGAATTTCGTGGCTTCC
ACGCCCGCGACCCTGGTCCTGCAGACTTCGTCGGCAGCCCTGGCACCCAACCCGGCCGGCAGCAGCACCAGCCAGGTGCA
ACTGCGCGCCACCGTGCGCGACGCTGCCGGCAATGCCGTCAAGGGCAAGACCGTGTTCTTCACCGTGGTGCAGGACCTGA
GCGGCGGCGCCATCAAGACGGGCACGGCAGTCACCGATGCCAACGGACTGGCGACGGATGTGTTCGTGGCCGGCGCCACC
TCGACTGCTGCCAATGGCGTGCAGATCCGCGCCAGCGTGGCCAACACCAACATCAGTGCCGTGTCGTCCCTGACGGTGAG
CAACCAGGCGCTCTTCATCTCCATCGCGGCCAACAACCAGATCGAGAAGCTGACGACCACGTACCGCAATACGTTCTCCG
TGCAGGTCACGGATGCCACCGGCGCGCCGGTGGCCAACCAGAATGTGGCGCTGTCGTACTGGGCTCCGCTGTATGGCAAG
GGTACTCTGCTCTTCGACAAGACCAACAATGTCTGGACCTACAGGGACAATCCCCCGGCCTTCTGCTTCAATGAAGATGC
CAATCGCAACGGCATTCTCGATCCGGGCGAGGACCGGGACGGCAACGGCCGCCTGAGCCCGGGGCTGCCGGCTGCCATTG
CGCCGGCTTCCGTGACCACGGATGCCACCGGCAGCGCAACCTTCACGCTGACCTTTGGGCAGCAATATGCCAATTGGCTG
CAGATCGAGCTGGCTGCCAGGGCCATCGTTGCGGGCACGGAATCCAGCACGTTCTTCAGCTTCTTCACGGGGGCACCGTC
TTCCGACATGACGAACGCGCAGGTGCCTCCCGCCTCGCAGGTCAGTCCTTTCGGCAGCATCAACAATTGCGCGGACCCCA
ACTGA

Upstream 100 bases:

>100_bases
GGACCCGTGAGTCCACCAAGCGCGAAATGCTGGTGTTCATCACGCCGAAGGTGATTTCGGACAAAGGTCCGGTCCGTTAA
AAGCAAATGAAGGTGAACGA

Downstream 100 bases:

>100_bases
GCATCCACCTCATCGGCCTTCCAGGCTCGGGTAAATCCACCGTCGGGCGACATCTCGCCCGGCGGCTGGGCCTGCCCTTC
ATCGATTCGGACCACGTGAT

Product: Ig domain-containing protein

Products: NA

Alternate protein names: Invasin Domain Protein; Ig Domain Domain Protein

Number of amino acids: Translated: 614; Mature: 614

Protein sequence:

>614_residues
MKALMRAIALTLAATLAACGGGGGSGGSSGGGSGGGTTTPNVASIEVLTSATTLASADATGVTVTAVLKDAANNAIASKP
VTFSASSGTLASAAASTGADGRATATLTAGTDRSNRDIVVTVASGSVTQKATIPVSGTTLTASGATSMLTGATTNFAVSL
RDSGGAALPGVAVTASSSLGNAVTASSATTDTNGSVTLAYAATRSGTDTLTIQGAGASQALTINVSSVNFAFSAPAANTE
VEVNSTRTVTVRYLSGNAGVAGKVISFGTTRGTVTPTQAVTDANGSATVQVTSPSVGIATVSARVDDNAITTLPLNFVAS
TPATLVLQTSSAALAPNPAGSSTSQVQLRATVRDAAGNAVKGKTVFFTVVQDLSGGAIKTGTAVTDANGLATDVFVAGAT
STAANGVQIRASVANTNISAVSSLTVSNQALFISIAANNQIEKLTTTYRNTFSVQVTDATGAPVANQNVALSYWAPLYGK
GTLLFDKTNNVWTYRDNPPAFCFNEDANRNGILDPGEDRDGNGRLSPGLPAAIAPASVTTDATGSATFTLTFGQQYANWL
QIELAARAIVAGTESSTFFSFFTGAPSSDMTNAQVPPASQVSPFGSINNCADPN

Sequences:

>Translated_614_residues
MKALMRAIALTLAATLAACGGGGGSGGSSGGGSGGGTTTPNVASIEVLTSATTLASADATGVTVTAVLKDAANNAIASKP
VTFSASSGTLASAAASTGADGRATATLTAGTDRSNRDIVVTVASGSVTQKATIPVSGTTLTASGATSMLTGATTNFAVSL
RDSGGAALPGVAVTASSSLGNAVTASSATTDTNGSVTLAYAATRSGTDTLTIQGAGASQALTINVSSVNFAFSAPAANTE
VEVNSTRTVTVRYLSGNAGVAGKVISFGTTRGTVTPTQAVTDANGSATVQVTSPSVGIATVSARVDDNAITTLPLNFVAS
TPATLVLQTSSAALAPNPAGSSTSQVQLRATVRDAAGNAVKGKTVFFTVVQDLSGGAIKTGTAVTDANGLATDVFVAGAT
STAANGVQIRASVANTNISAVSSLTVSNQALFISIAANNQIEKLTTTYRNTFSVQVTDATGAPVANQNVALSYWAPLYGK
GTLLFDKTNNVWTYRDNPPAFCFNEDANRNGILDPGEDRDGNGRLSPGLPAAIAPASVTTDATGSATFTLTFGQQYANWL
QIELAARAIVAGTESSTFFSFFTGAPSSDMTNAQVPPASQVSPFGSINNCADPN
>Mature_614_residues
MKALMRAIALTLAATLAACGGGGGSGGSSGGGSGGGTTTPNVASIEVLTSATTLASADATGVTVTAVLKDAANNAIASKP
VTFSASSGTLASAAASTGADGRATATLTAGTDRSNRDIVVTVASGSVTQKATIPVSGTTLTASGATSMLTGATTNFAVSL
RDSGGAALPGVAVTASSSLGNAVTASSATTDTNGSVTLAYAATRSGTDTLTIQGAGASQALTINVSSVNFAFSAPAANTE
VEVNSTRTVTVRYLSGNAGVAGKVISFGTTRGTVTPTQAVTDANGSATVQVTSPSVGIATVSARVDDNAITTLPLNFVAS
TPATLVLQTSSAALAPNPAGSSTSQVQLRATVRDAAGNAVKGKTVFFTVVQDLSGGAIKTGTAVTDANGLATDVFVAGAT
STAANGVQIRASVANTNISAVSSLTVSNQALFISIAANNQIEKLTTTYRNTFSVQVTDATGAPVANQNVALSYWAPLYGK
GTLLFDKTNNVWTYRDNPPAFCFNEDANRNGILDPGEDRDGNGRLSPGLPAAIAPASVTTDATGSATFTLTFGQQYANWL
QIELAARAIVAGTESSTFFSFFTGAPSSDMTNAQVPPASQVSPFGSINNCADPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60720; Mature: 60720

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51127 BIG1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALMRAIALTLAATLAACGGGGGSGGSSGGGSGGGTTTPNVASIEVLTSATTLASADAT
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECEEEECCCCCC
GVTVTAVLKDAANNAIASKPVTFSASSGTLASAAASTGADGRATATLTAGTDRSNRDIVV
CEEEEEEEHHHCCCCCCCCCEEEECCCCCEEHHHHCCCCCCCEEEEEEECCCCCCCEEEE
TVASGSVTQKATIPVSGTTLTASGATSMLTGATTNFAVSLRDSGGAALPGVAVTASSSLG
EECCCCCEEEEEEEECCCEEEECCCCCEEECCCCEEEEEEECCCCCCCCCEEEEECCCCC
NAVTASSATTDTNGSVTLAYAATRSGTDTLTIQGAGASQALTINVSSVNFAFSAPAANTE
CEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCE
VEVNSTRTVTVRYLSGNAGVAGKVISFGTTRGTVTPTQAVTDANGSATVQVTSPSVGIAT
EEECCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEECCCCCEEEEEECCCCEEEE
VSARVDDNAITTLPLNFVASTPATLVLQTSSAALAPNPAGSSTSQVQLRATVRDAAGNAV
EEEEECCCEEEEEEEEEECCCCEEEEEEECCCEECCCCCCCCCCEEEEEEEEECCCCCCC
KGKTVFFTVVQDLSGGAIKTGTAVTDANGLATDVFVAGATSTAANGVQIRASVANTNISA
CCCEEEEEEEECCCCCEEECCCEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCCEEH
VSSLTVSNQALFISIAANNQIEKLTTTYRNTFSVQVTDATGAPVANQNVALSYWAPLYGK
EEEEEECCCEEEEEEECCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEEEECCCCCC
GTLLFDKTNNVWTYRDNPPAFCFNEDANRNGILDPGEDRDGNGRLSPGLPAAIAPASVTT
EEEEEECCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEC
DATGSATFTLTFGQQYANWLQIELAARAIVAGTESSTFFSFFTGAPSSDMTNAQVPPASQ
CCCCCEEEEEEECCCCCCEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCC
VSPFGSINNCADPN
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKALMRAIALTLAATLAACGGGGGSGGSSGGGSGGGTTTPNVASIEVLTSATTLASADAT
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECEEEECCCCCC
GVTVTAVLKDAANNAIASKPVTFSASSGTLASAAASTGADGRATATLTAGTDRSNRDIVV
CEEEEEEEHHHCCCCCCCCCEEEECCCCCEEHHHHCCCCCCCEEEEEEECCCCCCCEEEE
TVASGSVTQKATIPVSGTTLTASGATSMLTGATTNFAVSLRDSGGAALPGVAVTASSSLG
EECCCCCEEEEEEEECCCEEEECCCCCEEECCCCEEEEEEECCCCCCCCCEEEEECCCCC
NAVTASSATTDTNGSVTLAYAATRSGTDTLTIQGAGASQALTINVSSVNFAFSAPAANTE
CEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCE
VEVNSTRTVTVRYLSGNAGVAGKVISFGTTRGTVTPTQAVTDANGSATVQVTSPSVGIAT
EEECCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEECCCCCEEEEEECCCCEEEE
VSARVDDNAITTLPLNFVASTPATLVLQTSSAALAPNPAGSSTSQVQLRATVRDAAGNAV
EEEEECCCEEEEEEEEEECCCCEEEEEEECCCEECCCCCCCCCCEEEEEEEEECCCCCCC
KGKTVFFTVVQDLSGGAIKTGTAVTDANGLATDVFVAGATSTAANGVQIRASVANTNISA
CCCEEEEEEEECCCCCEEECCCEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCCEEH
VSSLTVSNQALFISIAANNQIEKLTTTYRNTFSVQVTDATGAPVANQNVALSYWAPLYGK
EEEEEECCCEEEEEEECCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEEEECCCCCC
GTLLFDKTNNVWTYRDNPPAFCFNEDANRNGILDPGEDRDGNGRLSPGLPAAIAPASVTT
EEEEEECCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEC
DATGSATFTLTFGQQYANWLQIELAARAIVAGTESSTFFSFFTGAPSSDMTNAQVPPASQ
CCCCCEEEEEEECCCCCCEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCC
VSPFGSINNCADPN
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA