Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is engB [H]
Identifier: 120609677
GI number: 120609677
Start: 1078986
End: 1079747
Strand: Reverse
Name: engB [H]
Synonym: Aave_0983
Alternate gene names: 120609677
Gene position: 1079747-1078986 (Counterclockwise)
Preceding gene: 120609683
Following gene: 120609676
Centisome position: 20.17
GC content: 69.95
Gene sequence:
>762_bases ATGACGACTACATCACATGCGCCAGTTGCTGGCTCGCTTCCGCCCGCACCCGACGCCAAGGTCGCCGTGGGATGGATGCA CACGGCCCGCTTCCTCACCACCGCCGCGCAGCTGCACCACCTGCCGGCCATCCACGTCCCCGAATTCGCCTTCGTCGGGC GCTCCAACGCGGGCAAGTCCACCTGCATCAACACGCTGACGCAGCAAAAGCAGCTCGCGTTCGCCTCCAAGAAGCCGGGG CGCACGCAGCACATCAACCTGTTCGCCCTGGGCCGCCAGGGCGTGACCGACGCGGTGCTGGCCGACCTGCCCGGCTACGG CTATGCGGCCGTGTCGCGATCGGACAAGCAGCGCTGGCAGCAGGTGATGGTGAACTACCTCGTGAGCCGCGAGAGCCTCA CGGGCATCGTGCTGCTGTGCGACCCGCGCCTGGGCCTGACCGAGCTGGACGAGGCGCTGCTGGAGGCGGTGCGGCCCCGG GTGGAAGCCGGCCTGAAATTCCTGGTGCTGCTCACCAAGGCCGACAAGCTCACGCGCGCCGAGCAGGCCAAGGTGCTGTC CATCACGCGACTGCAGGCGGGCGGCGGGGAGGTGAAGATGTTCTCGGCCCTCAAGAAGCAGGGCGTGGACGAGGTCGCGC AACTGCTGTGGCAATGGTCGCACCCCCTGGACGGGACGCCGGCCGCAGCGGCCGGGCCGCAGGAGGGCCTGCAGCCGCCC GCCGACCCCGCGCCCGGCCCCGAGGATTCCGCAACCTCCTGA
Upstream 100 bases:
>100_bases TTCTTCATATCGGGGGTTCTGTGTTGTAGAAGGGGGGCCGCAAAGCCCGTCAATCTTACAATGCGGCACTTCGCGGGCGT CTCCCTGCTAACCCCCATTT
Downstream 100 bases:
>100_bases CGACCCGCGCGGACGATCCGCGCGGGTGGCCCCACGGACCGCCGCGCACATGACCGACACCACGCTCCACCCGCTGCCCC ACGGCATCACCCTGCACTGC
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTTTSHAPVAGSLPPAPDAKVAVGWMHTARFLTTAAQLHHLPAIHVPEFAFVGRSNAGKSTCINTLTQQKQLAFASKKPG RTQHINLFALGRQGVTDAVLADLPGYGYAAVSRSDKQRWQQVMVNYLVSRESLTGIVLLCDPRLGLTELDEALLEAVRPR VEAGLKFLVLLTKADKLTRAEQAKVLSITRLQAGGGEVKMFSALKKQGVDEVAQLLWQWSHPLDGTPAAAAGPQEGLQPP ADPAPGPEDSATS
Sequences:
>Translated_253_residues MTTTSHAPVAGSLPPAPDAKVAVGWMHTARFLTTAAQLHHLPAIHVPEFAFVGRSNAGKSTCINTLTQQKQLAFASKKPG RTQHINLFALGRQGVTDAVLADLPGYGYAAVSRSDKQRWQQVMVNYLVSRESLTGIVLLCDPRLGLTELDEALLEAVRPR VEAGLKFLVLLTKADKLTRAEQAKVLSITRLQAGGGEVKMFSALKKQGVDEVAQLLWQWSHPLDGTPAAAAGPQEGLQPP ADPAPGPEDSATS >Mature_252_residues TTTSHAPVAGSLPPAPDAKVAVGWMHTARFLTTAAQLHHLPAIHVPEFAFVGRSNAGKSTCINTLTQQKQLAFASKKPGR TQHINLFALGRQGVTDAVLADLPGYGYAAVSRSDKQRWQQVMVNYLVSRESLTGIVLLCDPRLGLTELDEALLEAVRPRV EAGLKFLVLLTKADKLTRAEQAKVLSITRLQAGGGEVKMFSALKKQGVDEVAQLLWQWSHPLDGTPAAAAGPQEGLQPPA DPAPGPEDSATS
Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI56549685, Length=164, Percent_Identity=31.0975609756098, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI145693205, Length=195, Percent_Identity=46.1538461538462, Blast_Score=152, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019987 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 27009; Mature: 26878
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTSHAPVAGSLPPAPDAKVAVGWMHTARFLTTAAQLHHLPAIHVPEFAFVGRSNAGKS CCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHH TCINTLTQQKQLAFASKKPGRTQHINLFALGRQGVTDAVLADLPGYGYAAVSRSDKQRWQ HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCHHHCCHHHHHHH QVMVNYLVSRESLTGIVLLCDPRLGLTELDEALLEAVRPRVEAGLKFLVLLTKADKLTRA HHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHH EQAKVLSITRLQAGGGEVKMFSALKKQGVDEVAQLLWQWSHPLDGTPAAAAGPQEGLQPP HHHHHHEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCC ADPAPGPEDSATS CCCCCCCCCCCCC >Mature Secondary Structure TTTSHAPVAGSLPPAPDAKVAVGWMHTARFLTTAAQLHHLPAIHVPEFAFVGRSNAGKS CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHH TCINTLTQQKQLAFASKKPGRTQHINLFALGRQGVTDAVLADLPGYGYAAVSRSDKQRWQ HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCHHHCCHHHHHHH QVMVNYLVSRESLTGIVLLCDPRLGLTELDEALLEAVRPRVEAGLKFLVLLTKADKLTRA HHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHH EQAKVLSITRLQAGGGEVKMFSALKKQGVDEVAQLLWQWSHPLDGTPAAAAGPQEGLQPP HHHHHHEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCC ADPAPGPEDSATS CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA