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The map label for this gene is yfhM [H]

Identifier: 120609676

GI number: 120609676

Start: 1078010

End: 1078936

Strand: Reverse

Name: yfhM [H]

Synonym: Aave_0982

Alternate gene names: 120609676

Gene position: 1078936-1078010 (Counterclockwise)

Preceding gene: 120609677

Following gene: 120609673

Centisome position: 20.16

GC content: 72.38

Gene sequence:

>927_bases
ATGACCGACACCACGCTCCACCCGCTGCCCCACGGCATCACCCTGCACTGCCGCACCCGCGGCGATGCCGGGCGCCCCGT
CCTGGTTTTCCTGCACGGTTTCCCCGAGGGCGCCTTCATCTGGGACGGGATGCTGGAGCATTTCGCACGCCCCGAGAACG
GTGCCTACCGCTGCGTGGCGCCCTTCCTGCGCGGCTTCGCGCCCTCCAGCAGCCCGCAGGCCGTGGAGGCCTACCGGGCC
AAACACCTCGTGCAGGATCTGGCAGCGCTCATCGAGGCGGAATGCGGTCCCGCCGCAGCCGGCGGCCGGCTCGCCGCCCT
GGTCGCGCACGACTGGGGCGGAGCGGTGGCCTGGAACCTGGCGAACCAGCGGCCCGACCTGCTGGAGCGCCTGGTGATCG
TGAACTCGCCCCATCCCGGCACCTTCCTGCGGGAACTGCAGCACAGCCCCGAGCAGCAAAAGGCCAGCGAATACATGCAC
TTCCTCTGCCGGCCCGACGCCGAGGCCCTGCTGGCGGAGGACGGCTACCGTCGGCTCTTCGGCTTTTTCGACCGCCCCGA
CGGGAGCGCCCCCGGATGGCTCACGCCCGAGCTGCGGGGCCGCTACCGCGCAACCTGGGACGAAGGCCTCACGGGCCCCT
GCAACTACTACCGGGCCAGCCCGCTGCGGCCGCCGCGCGAGGGCGAGCCGCATGCGGCCGCCGTCGAGCTGCCGGATGGC
ATGCTCGGCATCACCCTGCCCACGCTGGTGCTGTGGGGCCTGGAAGACCCGGCGCTGCGCCCGGGCCTGCTCGACGGGCT
GGAGCGCTGGGTGCCAGCGCTGCGGTTGCGCACGGTACCGGGCGCGTCGCACTGGATCGTGCACGAGCAGCCGGAGCGCG
TGGCGCGCGAGATCGGGGATTTCCTGAAGGAGACGCGCCAGCAGTAG

Upstream 100 bases:

>100_bases
CAGCCGCCCGCCGACCCCGCGCCCGGCCCCGAGGATTCCGCAACCTCCTGACGACCCGCGCGGACGATCCGCGCGGGTGG
CCCCACGGACCGCCGCGCAC

Downstream 100 bases:

>100_bases
CTGCCGCTGCCAGGCACGGCAGCGGTCGGCCGGCTTCAGCGATAGACGGACGGCTCGCCCGCAGGACGCGACTTGAAGCG
CCGGTGCACCCAGTAATACT

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTDTTLHPLPHGITLHCRTRGDAGRPVLVFLHGFPEGAFIWDGMLEHFARPENGAYRCVAPFLRGFAPSSSPQAVEAYRA
KHLVQDLAALIEAECGPAAAGGRLAALVAHDWGGAVAWNLANQRPDLLERLVIVNSPHPGTFLRELQHSPEQQKASEYMH
FLCRPDAEALLAEDGYRRLFGFFDRPDGSAPGWLTPELRGRYRATWDEGLTGPCNYYRASPLRPPREGEPHAAAVELPDG
MLGITLPTLVLWGLEDPALRPGLLDGLERWVPALRLRTVPGASHWIVHEQPERVAREIGDFLKETRQQ

Sequences:

>Translated_308_residues
MTDTTLHPLPHGITLHCRTRGDAGRPVLVFLHGFPEGAFIWDGMLEHFARPENGAYRCVAPFLRGFAPSSSPQAVEAYRA
KHLVQDLAALIEAECGPAAAGGRLAALVAHDWGGAVAWNLANQRPDLLERLVIVNSPHPGTFLRELQHSPEQQKASEYMH
FLCRPDAEALLAEDGYRRLFGFFDRPDGSAPGWLTPELRGRYRATWDEGLTGPCNYYRASPLRPPREGEPHAAAVELPDG
MLGITLPTLVLWGLEDPALRPGLLDGLERWVPALRLRTVPGASHWIVHEQPERVAREIGDFLKETRQQ
>Mature_307_residues
TDTTLHPLPHGITLHCRTRGDAGRPVLVFLHGFPEGAFIWDGMLEHFARPENGAYRCVAPFLRGFAPSSSPQAVEAYRAK
HLVQDLAALIEAECGPAAAGGRLAALVAHDWGGAVAWNLANQRPDLLERLVIVNSPHPGTFLRELQHSPEQQKASEYMHF
LCRPDAEALLAEDGYRRLFGFFDRPDGSAPGWLTPELRGRYRATWDEGLTGPCNYYRASPLRPPREGEPHAAAVELPDGM
LGITLPTLVLWGLEDPALRPGLLDGLERWVPALRLRTVPGASHWIVHEQPERVAREIGDFLKETRQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI218777837, Length=305, Percent_Identity=29.1803278688525, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI218777840, Length=297, Percent_Identity=31.3131313131313, Blast_Score=125, Evalue=4e-29,
Organism=Homo sapiens, GI13376164, Length=297, Percent_Identity=31.3131313131313, Blast_Score=125, Evalue=4e-29,
Organism=Homo sapiens, GI27597073, Length=302, Percent_Identity=23.841059602649, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17554012, Length=311, Percent_Identity=29.5819935691318, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17562298, Length=301, Percent_Identity=29.9003322259136, Blast_Score=129, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 34166; Mature: 34035

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTTLHPLPHGITLHCRTRGDAGRPVLVFLHGFPEGAFIWDGMLEHFARPENGAYRCVA
CCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEHHH
PFLRGFAPSSSPQAVEAYRAKHLVQDLAALIEAECGPAAAGGRLAALVAHDWGGAVAWNL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEECC
ANQRPDLLERLVIVNSPHPGTFLRELQHSPEQQKASEYMHFLCRPDAEALLAEDGYRRLF
CCCCHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCCHHHHHH
GFFDRPDGSAPGWLTPELRGRYRATWDEGLTGPCNYYRASPLRPPREGEPHAAAVELPDG
HHCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
MLGITLPTLVLWGLEDPALRPGLLDGLERWVPALRLRTVPGASHWIVHEQPERVAREIGD
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEECCHHHHHHHHHH
FLKETRQQ
HHHHHHCC
>Mature Secondary Structure 
TDTTLHPLPHGITLHCRTRGDAGRPVLVFLHGFPEGAFIWDGMLEHFARPENGAYRCVA
CCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEHHH
PFLRGFAPSSSPQAVEAYRAKHLVQDLAALIEAECGPAAAGGRLAALVAHDWGGAVAWNL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEECC
ANQRPDLLERLVIVNSPHPGTFLRELQHSPEQQKASEYMHFLCRPDAEALLAEDGYRRLF
CCCCHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCCHHHHHH
GFFDRPDGSAPGWLTPELRGRYRATWDEGLTGPCNYYRASPLRPPREGEPHAAAVELPDG
HHCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
MLGITLPTLVLWGLEDPALRPGLLDGLERWVPALRLRTVPGASHWIVHEQPERVAREIGD
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEECCHHHHHHHHHH
FLKETRQQ
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]