Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120609683

Identifier: 120609683

GI number: 120609683

Start: 1085999

End: 1086409

Strand: Reverse

Name: 120609683

Synonym: Aave_0989

Alternate gene names: NA

Gene position: 1086409-1085999 (Counterclockwise)

Preceding gene: 120609684

Following gene: 120609677

Centisome position: 20.3

GC content: 55.47

Gene sequence:

>411_bases
ATGAAGCTTGCCAACCTTAAGAGTGTGCCCTGCATCGTCTGGTGCTTGGCGCTGAATGCCTGCTTGGTGCTGGGCTGGTA
TGCAACGAGGCCGACACTCTTCATGACTTACAACAGCCCTCACTACGTGTATCGGCTGGAGATCTACGAAGCATCGCTGT
GGCAACGCATCGTGCATCACGATCAAAGAGACCCAGGCATCTTCCGCCTGTACGAGGTAAACCACAAGAAACTGCTCGGC
GAAAGCAAGGTGGTTGATCTTGAGCCTGGAATCGGTGCGATCGACTGGTATCTCGACCCCCCCATGCAGGCCAACAAAGT
TTATGCAGGCCTCGGAGTCGTCTTCGAAAACATCCCCTCAGAGTGCCCGATAGTGGGTCAGGTACCAGGTTGCCTCAGCG
CCAAGCCCTGA

Upstream 100 bases:

>100_bases
TCAGAGAATGGCGCGCCCTGTACGGACGGGGCGGGGATTTCATGGTCGTCTCCGACGTGCACCGCGTGCGCCTGCCTTTT
CCGATCAAGCTGGAGTGGTG

Downstream 100 bases:

>100_bases
CTCACGCCGCCGCCCTCGCAGCACGCGCACCGCGCAGTGCCTTCCAGATGCGCCATCCCAGCAGCGCGGCCAGGATGGCC
GCGTAAATGGCGACTTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKLANLKSVPCIVWCLALNACLVLGWYATRPTLFMTYNSPHYVYRLEIYEASLWQRIVHHDQRDPGIFRLYEVNHKKLLG
ESKVVDLEPGIGAIDWYLDPPMQANKVYAGLGVVFENIPSECPIVGQVPGCLSAKP

Sequences:

>Translated_136_residues
MKLANLKSVPCIVWCLALNACLVLGWYATRPTLFMTYNSPHYVYRLEIYEASLWQRIVHHDQRDPGIFRLYEVNHKKLLG
ESKVVDLEPGIGAIDWYLDPPMQANKVYAGLGVVFENIPSECPIVGQVPGCLSAKP
>Mature_136_residues
MKLANLKSVPCIVWCLALNACLVLGWYATRPTLFMTYNSPHYVYRLEIYEASLWQRIVHHDQRDPGIFRLYEVNHKKLLG
ESKVVDLEPGIGAIDWYLDPPMQANKVYAGLGVVFENIPSECPIVGQVPGCLSAKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15374; Mature: 15374

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLANLKSVPCIVWCLALNACLVLGWYATRPTLFMTYNSPHYVYRLEIYEASLWQRIVHH
CCCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHC
DQRDPGIFRLYEVNHKKLLGESKVVDLEPGIGAIDWYLDPPMQANKVYAGLGVVFENIPS
CCCCCCEEEEEECCCHHHCCCCCEEEECCCCCEEEEEECCCCCCCEEEHHHHHHHHCCCC
ECPIVGQVPGCLSAKP
CCCEEECCCCCCCCCC
>Mature Secondary Structure
MKLANLKSVPCIVWCLALNACLVLGWYATRPTLFMTYNSPHYVYRLEIYEASLWQRIVHH
CCCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHC
DQRDPGIFRLYEVNHKKLLGESKVVDLEPGIGAIDWYLDPPMQANKVYAGLGVVFENIPS
CCCCCCEEEEEECCCHHHCCCCCEEEECCCCCEEEEEECCCCCCCEEEHHHHHHHHCCCC
ECPIVGQVPGCLSAKP
CCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA