Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609683
Identifier: 120609683
GI number: 120609683
Start: 1085999
End: 1086409
Strand: Reverse
Name: 120609683
Synonym: Aave_0989
Alternate gene names: NA
Gene position: 1086409-1085999 (Counterclockwise)
Preceding gene: 120609684
Following gene: 120609677
Centisome position: 20.3
GC content: 55.47
Gene sequence:
>411_bases ATGAAGCTTGCCAACCTTAAGAGTGTGCCCTGCATCGTCTGGTGCTTGGCGCTGAATGCCTGCTTGGTGCTGGGCTGGTA TGCAACGAGGCCGACACTCTTCATGACTTACAACAGCCCTCACTACGTGTATCGGCTGGAGATCTACGAAGCATCGCTGT GGCAACGCATCGTGCATCACGATCAAAGAGACCCAGGCATCTTCCGCCTGTACGAGGTAAACCACAAGAAACTGCTCGGC GAAAGCAAGGTGGTTGATCTTGAGCCTGGAATCGGTGCGATCGACTGGTATCTCGACCCCCCCATGCAGGCCAACAAAGT TTATGCAGGCCTCGGAGTCGTCTTCGAAAACATCCCCTCAGAGTGCCCGATAGTGGGTCAGGTACCAGGTTGCCTCAGCG CCAAGCCCTGA
Upstream 100 bases:
>100_bases TCAGAGAATGGCGCGCCCTGTACGGACGGGGCGGGGATTTCATGGTCGTCTCCGACGTGCACCGCGTGCGCCTGCCTTTT CCGATCAAGCTGGAGTGGTG
Downstream 100 bases:
>100_bases CTCACGCCGCCGCCCTCGCAGCACGCGCACCGCGCAGTGCCTTCCAGATGCGCCATCCCAGCAGCGCGGCCAGGATGGCC GCGTAAATGGCGACTTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MKLANLKSVPCIVWCLALNACLVLGWYATRPTLFMTYNSPHYVYRLEIYEASLWQRIVHHDQRDPGIFRLYEVNHKKLLG ESKVVDLEPGIGAIDWYLDPPMQANKVYAGLGVVFENIPSECPIVGQVPGCLSAKP
Sequences:
>Translated_136_residues MKLANLKSVPCIVWCLALNACLVLGWYATRPTLFMTYNSPHYVYRLEIYEASLWQRIVHHDQRDPGIFRLYEVNHKKLLG ESKVVDLEPGIGAIDWYLDPPMQANKVYAGLGVVFENIPSECPIVGQVPGCLSAKP >Mature_136_residues MKLANLKSVPCIVWCLALNACLVLGWYATRPTLFMTYNSPHYVYRLEIYEASLWQRIVHHDQRDPGIFRLYEVNHKKLLG ESKVVDLEPGIGAIDWYLDPPMQANKVYAGLGVVFENIPSECPIVGQVPGCLSAKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15374; Mature: 15374
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLANLKSVPCIVWCLALNACLVLGWYATRPTLFMTYNSPHYVYRLEIYEASLWQRIVHH CCCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHC DQRDPGIFRLYEVNHKKLLGESKVVDLEPGIGAIDWYLDPPMQANKVYAGLGVVFENIPS CCCCCCEEEEEECCCHHHCCCCCEEEECCCCCEEEEEECCCCCCCEEEHHHHHHHHCCCC ECPIVGQVPGCLSAKP CCCEEECCCCCCCCCC >Mature Secondary Structure MKLANLKSVPCIVWCLALNACLVLGWYATRPTLFMTYNSPHYVYRLEIYEASLWQRIVHH CCCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHC DQRDPGIFRLYEVNHKKLLGESKVVDLEPGIGAIDWYLDPPMQANKVYAGLGVVFENIPS CCCCCCEEEEEECCCHHHCCCCCEEEECCCCCEEEEEECCCCCCCEEEHHHHHHHHCCCC ECPIVGQVPGCLSAKP CCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA