Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is metK [H]
Identifier: 120609673
GI number: 120609673
Start: 1074906
End: 1076087
Strand: Reverse
Name: metK [H]
Synonym: Aave_0979
Alternate gene names: 120609673
Gene position: 1076087-1074906 (Counterclockwise)
Preceding gene: 120609676
Following gene: 120609672
Centisome position: 20.1
GC content: 67.09
Gene sequence:
>1182_bases ATGGCGAACGACTTTCTCTTCACGTCGGAATCGGTGTCCGAAGGCCACCCCGACAAGGTGGCGGACCAGATCTCCGACGC CATCCTCGACGCGATCTTCCGCGAGGATCCCCGCAGCCGCGTGGCCGCCGAAACGCTGACCAACACCGGCCTCGTCGTGC TGGCCGGCGAGATCACCACCAATGCCCACGTGGATTACATCCAGGTGGCGCGCGACACCATCAAGCGCATCGGCTACGAC AACACCGACTACGGCATCGATTACAAGGGCTGCGCGGTGCTGGTGGCCTACGACAAGCAGAGCAACGACATCGCCCAGGG CGTGGACCATGCCAGCGACGACCACCTGAACACCGGCGCCGGCGACCAGGGCCTGATGTTCGGCTACGCCTGCGACGAAA CGCCCGAGCTGATGCCCGCGCCCATCTACTACGCGCACCGCCTGGTCGAGCGCCAGGCCCAGTTGCGCAAGGACGGCCGC CTGCCCTTCCTGCGCCCGGACGCCAAGAGCCAGGTGACGATGCGCTACGTGGACGGCAAGCCCCACAGCATCGATACCGT GGTGCTGTCCACCCAGCACCATCCCGACCAGTCCGAGACCGCCACCAGGATGAAGGCCAGCTTCATCGAGGCGGTGATCG AGGAGATCATCAAGCCCGTGCTGCCCAAGGAGTGGCTGCAGGAGACGAAGTACCTGATCAACCCCACGGGCCGCTTCGTC ATCGGCGGCCCGCAGGGCGACTGCGGCCTGACGGGCCGCAAGATCATCGTCGATACCTACGGCGGCGCCTGCCCCCACGG CGGCGGCGCCTTCAGCGGCAAGGACCCGACGAAGGTGGACCGCTCGGCCGCCTACGCCGCGCGCTACGTGGCCAAGAACA TCGTGGCCGCGGGCCTGGCGCGCCAGTGCCAGATCCAGGTGAGCTATGCCATCGGCGTGGCCCGCCCGATCAACGTCACC GTCTACACCGAGGGCACGGGCGTGATCCCGGACGAGAAGATCGCCGCGCTGGTGCAGGAGCATTTCGACCTGCGGCCCAA GGGCATCATCCAGATGCTCGACCTGCTGCGCCCGATCTACGAAAAGACCGCCGCCTACGGCCACTTCGGCCGCGAGGAAC CCGAGTTCACCTGGGAAAAGACGGACAAGGCGGCCGCGCTGCGCGCAGCGGCCGGGCTGTAA
Upstream 100 bases:
>100_bases TTGCAGGGCGACGTTAAACAACTCTGCTAAAGCGTTCGCCACGGCTCCACAAGGCTGAGGGCAACGCCCAAAATGCCAAA AAGCACAGGAGTTTATTCAA
Downstream 100 bases:
>100_bases GCCCGGCAACCCGCGCAGCGGGTTCGGCCGCCTTGCGGCGCAGGCTCACATCGCGCCAGCGATGTGAAGGCCCATAGGGC CGTGCCGGAGCCGCAAGCCT
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MANDFLFTSESVSEGHPDKVADQISDAILDAIFREDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYD NTDYGIDYKGCAVLVAYDKQSNDIAQGVDHASDDHLNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGR LPFLRPDAKSQVTMRYVDGKPHSIDTVVLSTQHHPDQSETATRMKASFIEAVIEEIIKPVLPKEWLQETKYLINPTGRFV IGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLARQCQIQVSYAIGVARPINVT VYTEGTGVIPDEKIAALVQEHFDLRPKGIIQMLDLLRPIYEKTAAYGHFGREEPEFTWEKTDKAAALRAAAGL
Sequences:
>Translated_393_residues MANDFLFTSESVSEGHPDKVADQISDAILDAIFREDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYD NTDYGIDYKGCAVLVAYDKQSNDIAQGVDHASDDHLNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGR LPFLRPDAKSQVTMRYVDGKPHSIDTVVLSTQHHPDQSETATRMKASFIEAVIEEIIKPVLPKEWLQETKYLINPTGRFV IGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLARQCQIQVSYAIGVARPINVT VYTEGTGVIPDEKIAALVQEHFDLRPKGIIQMLDLLRPIYEKTAAYGHFGREEPEFTWEKTDKAAALRAAAGL >Mature_392_residues ANDFLFTSESVSEGHPDKVADQISDAILDAIFREDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDN TDYGIDYKGCAVLVAYDKQSNDIAQGVDHASDDHLNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGRL PFLRPDAKSQVTMRYVDGKPHSIDTVVLSTQHHPDQSETATRMKASFIEAVIEEIIKPVLPKEWLQETKYLINPTGRFVI GGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLARQCQIQVSYAIGVARPINVTV YTEGTGVIPDEKIAALVQEHFDLRPKGIIQMLDLLRPIYEKTAAYGHFGREEPEFTWEKTDKAAALRAAAGL
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI4557737, Length=380, Percent_Identity=56.8421052631579, Blast_Score=405, Evalue=1e-113, Organism=Homo sapiens, GI5174529, Length=380, Percent_Identity=55.7894736842105, Blast_Score=401, Evalue=1e-112, Organism=Escherichia coli, GI1789311, Length=389, Percent_Identity=68.3804627249357, Blast_Score=524, Evalue=1e-150, Organism=Caenorhabditis elegans, GI17538498, Length=381, Percent_Identity=55.9055118110236, Blast_Score=402, Evalue=1e-112, Organism=Caenorhabditis elegans, GI25145633, Length=386, Percent_Identity=55.1813471502591, Blast_Score=400, Evalue=1e-112, Organism=Caenorhabditis elegans, GI17538494, Length=381, Percent_Identity=55.3805774278215, Blast_Score=398, Evalue=1e-111, Organism=Caenorhabditis elegans, GI17551082, Length=385, Percent_Identity=54.5454545454545, Blast_Score=397, Evalue=1e-111, Organism=Caenorhabditis elegans, GI32565911, Length=335, Percent_Identity=53.7313432835821, Blast_Score=334, Evalue=5e-92, Organism=Caenorhabditis elegans, GI32565905, Length=381, Percent_Identity=49.6062992125984, Blast_Score=330, Evalue=9e-91, Organism=Caenorhabditis elegans, GI25145635, Length=338, Percent_Identity=52.9585798816568, Blast_Score=328, Evalue=3e-90, Organism=Caenorhabditis elegans, GI32565903, Length=308, Percent_Identity=52.9220779220779, Blast_Score=293, Evalue=1e-79, Organism=Caenorhabditis elegans, GI32565909, Length=84, Percent_Identity=59.5238095238095, Blast_Score=112, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6323209, Length=385, Percent_Identity=57.1428571428571, Blast_Score=407, Evalue=1e-114, Organism=Saccharomyces cerevisiae, GI6320710, Length=384, Percent_Identity=56.5104166666667, Blast_Score=406, Evalue=1e-114, Organism=Drosophila melanogaster, GI45552159, Length=381, Percent_Identity=51.9685039370079, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580529, Length=381, Percent_Identity=51.9685039370079, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580537, Length=381, Percent_Identity=51.9685039370079, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580533, Length=381, Percent_Identity=51.9685039370079, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580535, Length=381, Percent_Identity=51.9685039370079, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580531, Length=381, Percent_Identity=51.9685039370079, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580527, Length=381, Percent_Identity=51.4435695538058, Blast_Score=359, Evalue=2e-99, Organism=Drosophila melanogaster, GI24580525, Length=381, Percent_Identity=51.4435695538058, Blast_Score=359, Evalue=2e-99, Organism=Drosophila melanogaster, GI24580541, Length=382, Percent_Identity=48.4293193717278, Blast_Score=334, Evalue=5e-92, Organism=Drosophila melanogaster, GI24580539, Length=119, Percent_Identity=55.4621848739496, Blast_Score=137, Evalue=2e-32,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 42982; Mature: 42851
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANDFLFTSESVSEGHPDKVADQISDAILDAIFREDPRSRVAAETLTNTGLVVLAGEITT CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCC NAHVDYIQVARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSNDIAQGVDHASDDHLNTGA CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCC GDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGRLPFLRPDAKSQVTMRYVDGK CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEECCC PHSIDTVVLSTQHHPDQSETATRMKASFIEAVIEEIIKPVLPKEWLQETKYLINPTGRFV CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEECCCCCEE IGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLA EECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC RQCQIQVSYAIGVARPINVTVYTEGTGVIPDEKIAALVQEHFDLRPKGIIQMLDLLRPIY HHEEEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH EKTAAYGHFGREEPEFTWEKTDKAAALRAAAGL HHHHHHCCCCCCCCCCCHHHCHHHHHHHHHCCC >Mature Secondary Structure ANDFLFTSESVSEGHPDKVADQISDAILDAIFREDPRSRVAAETLTNTGLVVLAGEITT CCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCC NAHVDYIQVARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSNDIAQGVDHASDDHLNTGA CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCC GDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGRLPFLRPDAKSQVTMRYVDGK CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEECCC PHSIDTVVLSTQHHPDQSETATRMKASFIEAVIEEIIKPVLPKEWLQETKYLINPTGRFV CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEECCCCCEE IGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLA EECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC RQCQIQVSYAIGVARPINVTVYTEGTGVIPDEKIAALVQEHFDLRPKGIIQMLDLLRPIY HHEEEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH EKTAAYGHFGREEPEFTWEKTDKAAALRAAAGL HHHHHHCCCCCCCCCCCHHHCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA