Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609641
Identifier: 120609641
GI number: 120609641
Start: 1033021
End: 1033392
Strand: Direct
Name: 120609641
Synonym: Aave_0947
Alternate gene names: NA
Gene position: 1033021-1033392 (Clockwise)
Preceding gene: 120609638
Following gene: 120609642
Centisome position: 19.3
GC content: 62.1
Gene sequence:
>372_bases ATGGCATCTTTGCAAGCAACCACCGCACTGATGGGCATCGGATTGGCAGTGCTGATCCTCTACCTCATCCGCCGCGATCA TCTCTATCTGATGCATGGCCTGTTCTGGGTCGCCGTGGCCTTCGCTGCAGCGGTGCTGGGGGCATGGCCGGGCCTGATCG ACCGGCTGGCGCGTCTTCTCGGGATCAGCTATCCGCCCGCACTCTTGCTGCTGCTCGCGAATATCGTTCTGGTCATCAAG GCACTGCATTCGGACATGGTCAATACCCGCATCGAACGGGACGTCCGCCGCCTGAACCAGCGCCTCGCGTTGCTCGAGGC CGATGCGGAGGAATTTCGTGATCGCCTCCGTGCCGACGTGCCCGACGCATGA
Upstream 100 bases:
>100_bases CTGCTTTCCGGAAACACCCGGAATTCTTGCGCAAGGCGCGAGGCCTTGCGTAACCCATTCCCTTTAACGCAATAAGACAG TCACCAGAGGCAGCAGATCG
Downstream 100 bases:
>100_bases CCGTGGCCGCTTTACCCCGATTGCTGCCGGTGGTGCTTTGTGGGGGCGTGGGCTCGCGCCTGTGGCCGCTCTCGCGTGAA ACCTATCCCAAGCAGTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MASLQATTALMGIGLAVLILYLIRRDHLYLMHGLFWVAVAFAAAVLGAWPGLIDRLARLLGISYPPALLLLLANIVLVIK ALHSDMVNTRIERDVRRLNQRLALLEADAEEFRDRLRADVPDA
Sequences:
>Translated_123_residues MASLQATTALMGIGLAVLILYLIRRDHLYLMHGLFWVAVAFAAAVLGAWPGLIDRLARLLGISYPPALLLLLANIVLVIK ALHSDMVNTRIERDVRRLNQRLALLEADAEEFRDRLRADVPDA >Mature_122_residues ASLQATTALMGIGLAVLILYLIRRDHLYLMHGLFWVAVAFAAAVLGAWPGLIDRLARLLGISYPPALLLLLANIVLVIKA LHSDMVNTRIERDVRRLNQRLALLEADAEEFRDRLRADVPDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13682; Mature: 13550
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLQATTALMGIGLAVLILYLIRRDHLYLMHGLFWVAVAFAAAVLGAWPGLIDRLARLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH GISYPPALLLLLANIVLVIKALHSDMVNTRIERDVRRLNQRLALLEADAEEFRDRLRADV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PDA CCC >Mature Secondary Structure ASLQATTALMGIGLAVLILYLIRRDHLYLMHGLFWVAVAFAAAVLGAWPGLIDRLARLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH GISYPPALLLLLANIVLVIKALHSDMVNTRIERDVRRLNQRLALLEADAEEFRDRLRADV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PDA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA