Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is pgi [H]
Identifier: 120609638
GI number: 120609638
Start: 1028649
End: 1030247
Strand: Direct
Name: pgi [H]
Synonym: Aave_0944
Alternate gene names: 120609638
Gene position: 1028649-1030247 (Clockwise)
Preceding gene: 120609637
Following gene: 120609641
Centisome position: 19.22
GC content: 70.61
Gene sequence:
>1599_bases ATGACGATGCCCGTTCCCGCCCGCGTGCGCTGCGACCGCACCGCCGCCTGGGCCGCACTGCAGGCGCACTACGAGGCCGC CGGCCGCACCTTCGATATGCGTGAGGCGTTTGCGGCCGATCCGCAGCGCTTCGGCCGTTTCAGCCAGGAAGCGCCCCACG TCTTCGCCGATCTGTCCAAGAACCGCATCGACGCGGGCACGGAAGCCCTGCTGCTGCAACTGGCGCGCGACTGCGGGCTG GAGGGCTGGCGCGACGCGATGTTCGCGGGAGAGGCCATCAACCATACCGAGCAGCGCGCCGTCATGCACTGGCTGCTGCG CGAGCCCGCCGCGGCGCGTGGGGCTTCGGGCCCCGGCGCGCCGGCACTGGTCACCGACGGCCTGCGCGACGTGCACGCCA CGCTGCAGGCGATGCTGGACTTCGCCGAACGCGTGCGGGCCGACGGCACCATCACCGACATCGTCAACATCGGCATCGGC GGCTCGGACCTCGGGCCTTCGATGGTGACCAAGGCGCTGGACGACCTGCGCCATCCGGGCAAGCGCCTGCACTTCGTCTC CAACGTCGACGGGGCCGAGCTGGGCAGCGTGCTGCCCGAGCTGCGGCCGCAGAACACGCTGTTCCTGATCGCCTCCAAGA CCTTCACCACGGCGGAGACGATGACCAACGCGCACGCCGCGCGCGCGTGGTTCCTGCAGCAGGGCGGCGGCGAAGCAGCG GTGGGACGGCATTTCGCCGCGCTCACCACGAACATCGAGGCGGCGTCCGCCTTCGGCATCGACACCACCTTCGGCTTCTG GGACTGGGTGGGCGGGCGCTATTCGCTCTGGTCGGCCATCGGCCTGCCGATCGCGATCGCCATCGGCGCCGAGGGCTTCC GTAGCCTGCTGGCCGGCGCGCATGCGATGGACGAGCACTTCCGAACCGCGCCGCTGGAGCGCAACCTGCCGGTGCGCCTG GGGCTGCTGGACGTCTGGTACCGCAACTTCCACGGTTTCGCGACGCGCAGCGTGGCCCCCTACAGCCATGCGCTGCGCCG GCTGCCGGCCTACCTGCAGCAGCTGGAGATGGAGAGCAACGGCAAGGGCGTGGATGCGCAAGGGGACACGCTGCCCTTCG CCACCTCGCCGGTGGTCTGGGGTGAGCCCGGCACCAATGGCCAGCATGCCTTCTTCCAGATGATCCACCAGGGTCCGGAC ATCGTGCCGGTGGAGTTCATCGTGATGCGCGAGCCCGGGCGCGGCCTGCCGGAACAGCACCCCCGCCTCGTGGCGAATGC GCTCGCGCAGGCCAAGGCGCTGATGCACGGCAAGCAGAGCGACGACGGCCACCGCCGCTTCACGGGCAACCGGCCCAGCA CCTTCCTGGTGCTCGACCGGCTCGACCCCGCATCGCTGGGTGCGCTGATCGCGCTCTACGAGCACCGCGTCTTCGTGAGC GGCGCGCTCTGGGGCATCAACAGCTTCGACCAGTGGGGCGTGGAGCTGGGCAAGGTGCTGGCCAAGGACCTGGAGCCGCG CCTGTCTTCGGGCGATACGGCAGGGTTGGACGGCTCCACCGCCGGGTTGATGGCGCGGCTCGCCCAGGGCCGTCGCTGA
Upstream 100 bases:
>100_bases CCATGGCCACCGAGAAGCTGGCCGAGGGCATCCGCGCCTTCGCGGCCGACGCGGCCAAGCTGGAACAGATGGTGCTGGCG GCATGACGGGGATGACCGCC
Downstream 100 bases:
>100_bases ACGATACCCCCAAAAGGAAAAGCCCGCAGGCCGTGAAGCCTGCGGGCTTTTTTGCTTTCCGCCCTGGGGCGGAGCAGCTG GCGGCGTCGGGGGCGGAAAT
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MTMPVPARVRCDRTAAWAALQAHYEAAGRTFDMREAFAADPQRFGRFSQEAPHVFADLSKNRIDAGTEALLLQLARDCGL EGWRDAMFAGEAINHTEQRAVMHWLLREPAAARGASGPGAPALVTDGLRDVHATLQAMLDFAERVRADGTITDIVNIGIG GSDLGPSMVTKALDDLRHPGKRLHFVSNVDGAELGSVLPELRPQNTLFLIASKTFTTAETMTNAHAARAWFLQQGGGEAA VGRHFAALTTNIEAASAFGIDTTFGFWDWVGGRYSLWSAIGLPIAIAIGAEGFRSLLAGAHAMDEHFRTAPLERNLPVRL GLLDVWYRNFHGFATRSVAPYSHALRRLPAYLQQLEMESNGKGVDAQGDTLPFATSPVVWGEPGTNGQHAFFQMIHQGPD IVPVEFIVMREPGRGLPEQHPRLVANALAQAKALMHGKQSDDGHRRFTGNRPSTFLVLDRLDPASLGALIALYEHRVFVS GALWGINSFDQWGVELGKVLAKDLEPRLSSGDTAGLDGSTAGLMARLAQGRR
Sequences:
>Translated_532_residues MTMPVPARVRCDRTAAWAALQAHYEAAGRTFDMREAFAADPQRFGRFSQEAPHVFADLSKNRIDAGTEALLLQLARDCGL EGWRDAMFAGEAINHTEQRAVMHWLLREPAAARGASGPGAPALVTDGLRDVHATLQAMLDFAERVRADGTITDIVNIGIG GSDLGPSMVTKALDDLRHPGKRLHFVSNVDGAELGSVLPELRPQNTLFLIASKTFTTAETMTNAHAARAWFLQQGGGEAA VGRHFAALTTNIEAASAFGIDTTFGFWDWVGGRYSLWSAIGLPIAIAIGAEGFRSLLAGAHAMDEHFRTAPLERNLPVRL GLLDVWYRNFHGFATRSVAPYSHALRRLPAYLQQLEMESNGKGVDAQGDTLPFATSPVVWGEPGTNGQHAFFQMIHQGPD IVPVEFIVMREPGRGLPEQHPRLVANALAQAKALMHGKQSDDGHRRFTGNRPSTFLVLDRLDPASLGALIALYEHRVFVS GALWGINSFDQWGVELGKVLAKDLEPRLSSGDTAGLDGSTAGLMARLAQGRR >Mature_531_residues TMPVPARVRCDRTAAWAALQAHYEAAGRTFDMREAFAADPQRFGRFSQEAPHVFADLSKNRIDAGTEALLLQLARDCGLE GWRDAMFAGEAINHTEQRAVMHWLLREPAAARGASGPGAPALVTDGLRDVHATLQAMLDFAERVRADGTITDIVNIGIGG SDLGPSMVTKALDDLRHPGKRLHFVSNVDGAELGSVLPELRPQNTLFLIASKTFTTAETMTNAHAARAWFLQQGGGEAAV GRHFAALTTNIEAASAFGIDTTFGFWDWVGGRYSLWSAIGLPIAIAIGAEGFRSLLAGAHAMDEHFRTAPLERNLPVRLG LLDVWYRNFHGFATRSVAPYSHALRRLPAYLQQLEMESNGKGVDAQGDTLPFATSPVVWGEPGTNGQHAFFQMIHQGPDI VPVEFIVMREPGRGLPEQHPRLVANALAQAKALMHGKQSDDGHRRFTGNRPSTFLVLDRLDPASLGALIALYEHRVFVSG ALWGINSFDQWGVELGKVLAKDLEPRLSSGDTAGLDGSTAGLMARLAQGRR
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=558, Percent_Identity=46.0573476702509, Blast_Score=480, Evalue=1e-135, Organism=Homo sapiens, GI296080693, Length=558, Percent_Identity=43.5483870967742, Blast_Score=442, Evalue=1e-124, Organism=Escherichia coli, GI1790457, Length=556, Percent_Identity=47.3021582733813, Blast_Score=490, Evalue=1e-139, Organism=Caenorhabditis elegans, GI71996703, Length=550, Percent_Identity=46.5454545454545, Blast_Score=466, Evalue=1e-131, Organism=Caenorhabditis elegans, GI71996708, Length=550, Percent_Identity=46.5454545454545, Blast_Score=465, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6319673, Length=548, Percent_Identity=45.8029197080292, Blast_Score=465, Evalue=1e-132, Organism=Drosophila melanogaster, GI24651916, Length=564, Percent_Identity=46.8085106382979, Blast_Score=484, Evalue=1e-137, Organism=Drosophila melanogaster, GI24651914, Length=564, Percent_Identity=46.8085106382979, Blast_Score=484, Evalue=1e-137, Organism=Drosophila melanogaster, GI17737445, Length=564, Percent_Identity=46.8085106382979, Blast_Score=484, Evalue=1e-137,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 57700; Mature: 57569
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMPVPARVRCDRTAAWAALQAHYEAAGRTFDMREAFAADPQRFGRFSQEAPHVFADLSK CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHCCCCCCCCHHHHHHHH NRIDAGTEALLLQLARDCGLEGWRDAMFAGEAINHTEQRAVMHWLLREPAAARGASGPGA CCCCCHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC PALVTDGLRDVHATLQAMLDFAERVRADGTITDIVNIGIGGSDLGPSMVTKALDDLRHPG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHEEECCCCCCCCHHHHHHHHHHHHCCC KRLHFVSNVDGAELGSVLPELRPQNTLFLIASKTFTTAETMTNAHAARAWFLQQGGGEAA HHEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHH VGRHFAALTTNIEAASAFGIDTTFGFWDWVGGRYSLWSAIGLPIAIAIGAEGFRSLLAGA HHHHHHHHHCCCHHHHHCCCCCCCCHHHHCCCCHHHHHHHCCCEEEEECCHHHHHHHHHH HAMDEHFRTAPLERNLPVRLGLLDVWYRNFHGFATRSVAPYSHALRRLPAYLQQLEMESN HHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC GKGVDAQGDTLPFATSPVVWGEPGTNGQHAFFQMIHQGPDIVPVEFIVMREPGRGLPEQH CCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCH PRLVANALAQAKALMHGKQSDDGHRRFTGNRPSTFLVLDRLDPASLGALIALYEHRVFVS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEE GALWGINSFDQWGVELGKVLAKDLEPRLSSGDTAGLDGSTAGLMARLAQGRR EHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure TMPVPARVRCDRTAAWAALQAHYEAAGRTFDMREAFAADPQRFGRFSQEAPHVFADLSK CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHCCCCCCCCHHHHHHHH NRIDAGTEALLLQLARDCGLEGWRDAMFAGEAINHTEQRAVMHWLLREPAAARGASGPGA CCCCCHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC PALVTDGLRDVHATLQAMLDFAERVRADGTITDIVNIGIGGSDLGPSMVTKALDDLRHPG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHEEECCCCCCCCHHHHHHHHHHHHCCC KRLHFVSNVDGAELGSVLPELRPQNTLFLIASKTFTTAETMTNAHAARAWFLQQGGGEAA HHEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHH VGRHFAALTTNIEAASAFGIDTTFGFWDWVGGRYSLWSAIGLPIAIAIGAEGFRSLLAGA HHHHHHHHHCCCHHHHHCCCCCCCCHHHHCCCCHHHHHHHCCCEEEEECCHHHHHHHHHH HAMDEHFRTAPLERNLPVRLGLLDVWYRNFHGFATRSVAPYSHALRRLPAYLQQLEMESN HHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC GKGVDAQGDTLPFATSPVVWGEPGTNGQHAFFQMIHQGPDIVPVEFIVMREPGRGLPEQH CCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCH PRLVANALAQAKALMHGKQSDDGHRRFTGNRPSTFLVLDRLDPASLGALIALYEHRVFVS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEE GALWGINSFDQWGVELGKVLAKDLEPRLSSGDTAGLDGSTAGLMARLAQGRR EHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA