| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609582
Identifier: 120609582
GI number: 120609582
Start: 965759
End: 966139
Strand: Reverse
Name: 120609582
Synonym: Aave_0888
Alternate gene names: NA
Gene position: 966139-965759 (Counterclockwise)
Preceding gene: 120609586
Following gene: 120609579
Centisome position: 18.05
GC content: 56.96
Gene sequence:
>381_bases ATGAACATGCCGATGGTGGAGGTCATCCATGAGAGCCTGTTGATCTGCTGCTTTCGACGTGGCCGACAGCGCGAAGATTT TGCATCCCGTCTGCGCCTTCTGGGTACTCAGGCAGAGCAACGTCGCCTTGGCGTTGGATGGCAGCCTCTCCTTGAGTGCT GGAAGCACATCCCTGCGGTATTGAGCAACCCGGGCAGGATCGGTTCCCAGCGAATCGATGATAAAGACCGAAAGACGCCT GCCGATTCTGCGGACATCCACGGCGACCGCATGGTCTTCATAACCGGGCAGTACCGCAACGGCCCTCTTGCCCGACTCAG AGGTGCTATTTCTCAACCATTGACCAAGATCCTTCGACGTCTCCAGCAAAGACAACGGTGA
Upstream 100 bases:
>100_bases GTGCGGACAGTAGCGGCTTCCCGTCGATCATGCGGATGTCGCCCTCCCCGACCGCTGCCACGGGGATCTCGTTGCCGCTC CAGTCCTCGAACACGTCACC
Downstream 100 bases:
>100_bases GCCGGGTTTGCGCGCAGACTCCGCGGCGATTAGCGTCGGAATGATTGCGGCGTCGAAGATTTTCTCGTCTTCTCCTGGCG TCCAGTTTCCGTCGAGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MNMPMVEVIHESLLICCFRRGRQREDFASRLRLLGTQAEQRRLGVGWQPLLECWKHIPAVLSNPGRIGSQRIDDKDRKTP ADSADIHGDRMVFITGQYRNGPLARLRGAISQPLTKILRRLQQRQR
Sequences:
>Translated_126_residues MNMPMVEVIHESLLICCFRRGRQREDFASRLRLLGTQAEQRRLGVGWQPLLECWKHIPAVLSNPGRIGSQRIDDKDRKTP ADSADIHGDRMVFITGQYRNGPLARLRGAISQPLTKILRRLQQRQR >Mature_126_residues MNMPMVEVIHESLLICCFRRGRQREDFASRLRLLGTQAEQRRLGVGWQPLLECWKHIPAVLSNPGRIGSQRIDDKDRKTP ADSADIHGDRMVFITGQYRNGPLARLRGAISQPLTKILRRLQQRQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14569; Mature: 14569
Theoretical pI: Translated: 11.68; Mature: 11.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMPMVEVIHESLLICCFRRGRQREDFASRLRLLGTQAEQRRLGVGWQPLLECWKHIPAV CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHH LSNPGRIGSQRIDDKDRKTPADSADIHGDRMVFITGQYRNGPLARLRGAISQPLTKILRR HCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH LQQRQR HHHHCC >Mature Secondary Structure MNMPMVEVIHESLLICCFRRGRQREDFASRLRLLGTQAEQRRLGVGWQPLLECWKHIPAV CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHH LSNPGRIGSQRIDDKDRKTPADSADIHGDRMVFITGQYRNGPLARLRGAISQPLTKILRR HCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH LQQRQR HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA