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The map label for this gene is yqaA [H]

Identifier: 120609586

GI number: 120609586

Start: 969211

End: 969693

Strand: Reverse

Name: yqaA [H]

Synonym: Aave_0892

Alternate gene names: 120609586

Gene position: 969693-969211 (Counterclockwise)

Preceding gene: 120609591

Following gene: 120609582

Centisome position: 18.12

GC content: 67.91

Gene sequence:

>483_bases
ATGGAAACCTGGATGCAACACCTCATGGACCTGCTGGCACTGCCCCAGTACGGCCTCAGCACGGTCTTCCTGGTGTCGTT
CATCTCCGCGACGCTGCTGCCCCTGGGCTCGGAGCCGGCGGTGTTCGGCCTGATCCAGCTCAACCCGCAACTGTTCTGGC
CCGCCATCCTCGTGGCGACCGCGGGCAACACCCTGGGCGGCGCCGTCAGCTGGTGGATGGGTCTGGGCGCGCACAAGGCG
GTGGACAAGGCGCGCGGCGAGCACACCAACGTGCGCGCGCTTGCCTGGCTGCAGCGCTTCGGCGCCAAGGCCTGCCTGCT
GAGCTGGCTGCCGGTGGTGGGCGATCCGCTCTGCGCCGTGGCGGGCTGGCTGAAACTGCCGTTCTGGCCTTGCGTGGCCT
ACATGGCGATCGGCAAGTTCCTGCGCTACCTGGCCATGACCGGCGGCCTGCTGTACCTCTGGCCGAAAGCCATGGTGCAT
TGA

Upstream 100 bases:

>100_bases
CCCTGAATAAAGACTATGGCGTGGCGCGCCCCGCCACAGCGCGACGGCGTGCCGGGCTACAGCGCGGGCAAGCGGCACCC
CCCTAAACTTGCGCCCAGCT

Downstream 100 bases:

>100_bases
ACGCCGGGCTCGCGCAGGGAGCCCGCCCTGCTCAGGGCACCGCCACGCGCCGGCGCCGCCAGGTGCCTTCGAGCGTGTAG
AGCACCAGCGCCGCCCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
METWMQHLMDLLALPQYGLSTVFLVSFISATLLPLGSEPAVFGLIQLNPQLFWPAILVATAGNTLGGAVSWWMGLGAHKA
VDKARGEHTNVRALAWLQRFGAKACLLSWLPVVGDPLCAVAGWLKLPFWPCVAYMAIGKFLRYLAMTGGLLYLWPKAMVH

Sequences:

>Translated_160_residues
METWMQHLMDLLALPQYGLSTVFLVSFISATLLPLGSEPAVFGLIQLNPQLFWPAILVATAGNTLGGAVSWWMGLGAHKA
VDKARGEHTNVRALAWLQRFGAKACLLSWLPVVGDPLCAVAGWLKLPFWPCVAYMAIGKFLRYLAMTGGLLYLWPKAMVH
>Mature_160_residues
METWMQHLMDLLALPQYGLSTVFLVSFISATLLPLGSEPAVFGLIQLNPQLFWPAILVATAGNTLGGAVSWWMGLGAHKA
VDKARGEHTNVRALAWLQRFGAKACLLSWLPVVGDPLCAVAGWLKLPFWPCVAYMAIGKFLRYLAMTGGLLYLWPKAMVH

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=128, Percent_Identity=38.28125, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 17552; Mature: 17552

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METWMQHLMDLLALPQYGLSTVFLVSFISATLLPLGSEPAVFGLIQLNPQLFWPAILVAT
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHH
AGNTLGGAVSWWMGLGAHKAVDKARGEHTNVRALAWLQRFGAKACLLSWLPVVGDPLCAV
CCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHH
AGWLKLPFWPCVAYMAIGKFLRYLAMTGGLLYLWPKAMVH
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHCC
>Mature Secondary Structure
METWMQHLMDLLALPQYGLSTVFLVSFISATLLPLGSEPAVFGLIQLNPQLFWPAILVAT
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHH
AGNTLGGAVSWWMGLGAHKAVDKARGEHTNVRALAWLQRFGAKACLLSWLPVVGDPLCAV
CCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHH
AGWLKLPFWPCVAYMAIGKFLRYLAMTGGLLYLWPKAMVH
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]