| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609577
Identifier: 120609577
GI number: 120609577
Start: 959095
End: 960888
Strand: Reverse
Name: 120609577
Synonym: Aave_0883
Alternate gene names: NA
Gene position: 960888-959095 (Counterclockwise)
Preceding gene: 120609578
Following gene: 120609576
Centisome position: 17.95
GC content: 72.69
Gene sequence:
>1794_bases ATGGCCGCCCACCGATCGCACGCCCCCGCCGTCCATTACCGCGTGGAAGCCGCGCAGTTGCACGCGCGCATCTACCACGT CACCCTCACGGTGGAGAGCCCCGCGGCGCAGCAGGAGCTGTCGCTGCCCGTGTGGATCCCCGGCAGCTACCTGGTGCGCG AGTTCGCGAAGAACCTGCAGAACCTGCGCGCCCGCCAGGGCGGGCAGGAGGTGGCGCTCGCGCAGCGCGGCAAATGCCTC TGGCAGGCCGACTGCCGCGAGGGCGCGCCGCTGGTGCTGACCTACGAAGTCAGCGCCTACGACAACTCGGTGCGCACGGC GTGGCTCGATGCCTCGCGCGGCTTCTTCAACGGCACGAGCCTGTGCCTGCGCGTGCATGGCCAGGAAGCGGCCCGCCACG ACCTGGAGATCGTCGCCACGCCGGAGGTGTCGCACTGGTCCGTGGCCACGGGCCTCACGGCGGAGAAGACCACGCGCGCG GGCTTCGGCACCTACCGCGCGGCCTCGTACGACGAGCTGGTGGACTGCCCGGTGGAGATGGGGCCCTTCTGGAGCGCCCG CTTCACCGCCTGCGGCGTGCCGCACCGCCTGGTCGTGGCCGGCGCGGCGCCCTCGTTCGACGGCGAGCGCCTGGTGGCCG ATACGCGCCGCATCTGCGAGGCGGGCATCCGCTTCTGGCATGGGGCGGGCAAGCCGCCCTATGCGCAGTACCTGTTCATG CTCAACGTGGTGGACGACGGCTACGGCGGGCTGGAGCACCGCAACTCGACAGCCCTGGTCTGCGGCCGCCGCGACCTGCC CCGCCAGGGCGAGGCCAAGGCGCCCGAGGGGTACACCACGCTGCTCGGGCTCATCAGCCACGAACATTTCCACACCTGGA ACGTCAAGCGCCTGCGCCCGGCCGAGCTGGCGCGCTACGACTACACCCAGGAGAACTACACCCGCCTGCTGTGGTTCTTC GAGGGCTTCACCAGCTACTACGACGACCTGCTGCTGCGCCGCGCCGGGCTGATCGACGACGCCACCTACCTGCGCCTGCT CGCCAAGAACATCAACCAGGTGCTGCAGACACCGGGGCGCCGCGTGCAGAGCGTGGCCGACGCCAGCTTCGACGCCTGGG TGAAGTACTACCGCCAGGACGAGAACACGCCGAACGCCACGGTGAGCTACTACACCAAGGGCGCGCTCGTCGGCCTGTGC CTGGACCTGGCGCTGCGCCGCGAGGGCCGCACCACGCTCGACGACGTGATGCGCGCGCTCTGGGACCGCTGCGATGCCGG CCCCATGTCGGAAGACGACCTGCTGGCGGTGCTCGAAGCCCTCTCGGGCCGCCCGTTCGCGCGCGAGATCGCCGAATGGG TGCACGGCACCGGCGACCTGCCCCTGGCCGAGATGCTGGCCGCGCACGGCGTGGCCCTGCGCGCGGAAGCGGCGCAGCCC GCGCAGCGGCTGGGCCTGCGGGTGTCCGAGGGCCAGGGCCTGCAGGTGAAGGTGGTGCTGCGCGGCGGCCTGGCCGAAGA GGCGGGCTTTTCCGCGGGCGACGAGTGGCTGGCCGTGGAGGCGCAGGGCGAGACCTGGCGCGTGCAGCGGCTGGACGACG TCGCGCTCTACGCCGGCCGCGAGAAGCGCGTCACCGCGCTGGTGTCCCGCGACCGCCGCGTGCTGCGGCTGCCGCTGGCG CTGGAACGCGAGGGTGGCGCGCCGGACGACACCGTCGCGCTGGCGCTGGCGGATGCCCCCCTGGCGCGGCGCTGGCTGGA CGGCCAGCCGGACACGGGCACGGCCGCCGGGTAG
Upstream 100 bases:
>100_bases GACGCGCGCGAGGTGGAAAAGCGCCTCGCCGACGCGGGATCGGGCGCCGGCCCGGCCCCCGCCACGAACTGATCCTTTTC CCGCCCCTCCCGGATACCGC
Downstream 100 bases:
>100_bases CCTGCGGGACGGGCGCGAAAGGCGGCCCTTGGGTATAGTCGTCCGCACCACAACGACACCCAGGAGATACCCCCTTGGCC TACGAAGTCATCGAGGTCCG
Product: peptidase M61 domain-containing protein
Products: NA
Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Pdz/Dhr/Glgf; M61 Glycyl Aminopeptidase; Trypsin-Like Serine Protease; Metallopeptidase; Aminopeptidase N Family Protein; PDZ Domain-Containing Protein; PDZ Domain Family Protein; Protease With C-Terminal PDZ Domain-Containing Protein; Glycyl Aminopeptidase Protein; PDZ/DHR/GLGFPeptidase M; Aminopeptidase; Signaling Protein; M61 Glycyl Aminopeptidase Protein; PDZ Domain Protein; M61 Glycyl Aminopeptidase Family Protein
Number of amino acids: Translated: 597; Mature: 596
Protein sequence:
>597_residues MAAHRSHAPAVHYRVEAAQLHARIYHVTLTVESPAAQQELSLPVWIPGSYLVREFAKNLQNLRARQGGQEVALAQRGKCL WQADCREGAPLVLTYEVSAYDNSVRTAWLDASRGFFNGTSLCLRVHGQEAARHDLEIVATPEVSHWSVATGLTAEKTTRA GFGTYRAASYDELVDCPVEMGPFWSARFTACGVPHRLVVAGAAPSFDGERLVADTRRICEAGIRFWHGAGKPPYAQYLFM LNVVDDGYGGLEHRNSTALVCGRRDLPRQGEAKAPEGYTTLLGLISHEHFHTWNVKRLRPAELARYDYTQENYTRLLWFF EGFTSYYDDLLLRRAGLIDDATYLRLLAKNINQVLQTPGRRVQSVADASFDAWVKYYRQDENTPNATVSYYTKGALVGLC LDLALRREGRTTLDDVMRALWDRCDAGPMSEDDLLAVLEALSGRPFAREIAEWVHGTGDLPLAEMLAAHGVALRAEAAQP AQRLGLRVSEGQGLQVKVVLRGGLAEEAGFSAGDEWLAVEAQGETWRVQRLDDVALYAGREKRVTALVSRDRRVLRLPLA LEREGGAPDDTVALALADAPLARRWLDGQPDTGTAAG
Sequences:
>Translated_597_residues MAAHRSHAPAVHYRVEAAQLHARIYHVTLTVESPAAQQELSLPVWIPGSYLVREFAKNLQNLRARQGGQEVALAQRGKCL WQADCREGAPLVLTYEVSAYDNSVRTAWLDASRGFFNGTSLCLRVHGQEAARHDLEIVATPEVSHWSVATGLTAEKTTRA GFGTYRAASYDELVDCPVEMGPFWSARFTACGVPHRLVVAGAAPSFDGERLVADTRRICEAGIRFWHGAGKPPYAQYLFM LNVVDDGYGGLEHRNSTALVCGRRDLPRQGEAKAPEGYTTLLGLISHEHFHTWNVKRLRPAELARYDYTQENYTRLLWFF EGFTSYYDDLLLRRAGLIDDATYLRLLAKNINQVLQTPGRRVQSVADASFDAWVKYYRQDENTPNATVSYYTKGALVGLC LDLALRREGRTTLDDVMRALWDRCDAGPMSEDDLLAVLEALSGRPFAREIAEWVHGTGDLPLAEMLAAHGVALRAEAAQP AQRLGLRVSEGQGLQVKVVLRGGLAEEAGFSAGDEWLAVEAQGETWRVQRLDDVALYAGREKRVTALVSRDRRVLRLPLA LEREGGAPDDTVALALADAPLARRWLDGQPDTGTAAG >Mature_596_residues AAHRSHAPAVHYRVEAAQLHARIYHVTLTVESPAAQQELSLPVWIPGSYLVREFAKNLQNLRARQGGQEVALAQRGKCLW QADCREGAPLVLTYEVSAYDNSVRTAWLDASRGFFNGTSLCLRVHGQEAARHDLEIVATPEVSHWSVATGLTAEKTTRAG FGTYRAASYDELVDCPVEMGPFWSARFTACGVPHRLVVAGAAPSFDGERLVADTRRICEAGIRFWHGAGKPPYAQYLFML NVVDDGYGGLEHRNSTALVCGRRDLPRQGEAKAPEGYTTLLGLISHEHFHTWNVKRLRPAELARYDYTQENYTRLLWFFE GFTSYYDDLLLRRAGLIDDATYLRLLAKNINQVLQTPGRRVQSVADASFDAWVKYYRQDENTPNATVSYYTKGALVGLCL DLALRREGRTTLDDVMRALWDRCDAGPMSEDDLLAVLEALSGRPFAREIAEWVHGTGDLPLAEMLAAHGVALRAEAAQPA QRLGLRVSEGQGLQVKVVLRGGLAEEAGFSAGDEWLAVEAQGETWRVQRLDDVALYAGREKRVTALVSRDRRVLRLPLAL EREGGAPDDTVALALADAPLARRWLDGQPDTGTAAG
Specific function: Unknown
COG id: COG3975
COG function: function code R; Predicted protease with the C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66038; Mature: 65907
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAHRSHAPAVHYRVEAAQLHARIYHVTLTVESPAAQQELSLPVWIPGSYLVREFAKNLQ CCCCCCCCCEEEEEEHHHHEEEEEEEEEEEECCCCCHHHCCCEEECCHHHHHHHHHHHHH NLRARQGGQEVALAQRGKCLWQADCREGAPLVLTYEVSAYDNSVRTAWLDASRGFFNGTS HHHHHCCCCHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCE LCLRVHGQEAARHDLEIVATPEVSHWSVATGLTAEKTTRAGFGTYRAASYDELVDCPVEM EEEEECCCHHCCCCCEEEECCCCCCEEEECCCCCCHHCCCCCCCCCCCCHHHHHCCCCCC GPFWSARFTACGVPHRLVVAGAAPSFDGERLVADTRRICEAGIRFWHGAGKPPYAQYLFM CCCCCCCHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEE LNVVDDGYGGLEHRNSTALVCGRRDLPRQGEAKAPEGYTTLLGLISHEHFHTWNVKRLRP EEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCH AELARYDYTQENYTRLLWFFEGFTSYYDDLLLRRAGLIDDATYLRLLAKNINQVLQTPGR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCH RVQSVADASFDAWVKYYRQDENTPNATVSYYTKGALVGLCLDLALRREGRTTLDDVMRAL HHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHH WDRCDAGPMSEDDLLAVLEALSGRPFAREIAEWVHGTGDLPLAEMLAAHGVALRAEAAQP HHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEHHCCH AQRLGLRVSEGQGLQVKVVLRGGLAEEAGFSAGDEWLAVEAQGETWRVQRLDDVALYAGR HHHHCEEEECCCCCEEEEEEECCCHHHCCCCCCCCEEEEEECCCEEEEEECCHHHHHCCC EKRVTALVSRDRRVLRLPLALEREGGAPDDTVALALADAPLARRWLDGQPDTGTAAG CHHHHHHHHCCCEEEECCEEEECCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AAHRSHAPAVHYRVEAAQLHARIYHVTLTVESPAAQQELSLPVWIPGSYLVREFAKNLQ CCCCCCCCEEEEEEHHHHEEEEEEEEEEEECCCCCHHHCCCEEECCHHHHHHHHHHHHH NLRARQGGQEVALAQRGKCLWQADCREGAPLVLTYEVSAYDNSVRTAWLDASRGFFNGTS HHHHHCCCCHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCE LCLRVHGQEAARHDLEIVATPEVSHWSVATGLTAEKTTRAGFGTYRAASYDELVDCPVEM EEEEECCCHHCCCCCEEEECCCCCCEEEECCCCCCHHCCCCCCCCCCCCHHHHHCCCCCC GPFWSARFTACGVPHRLVVAGAAPSFDGERLVADTRRICEAGIRFWHGAGKPPYAQYLFM CCCCCCCHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEE LNVVDDGYGGLEHRNSTALVCGRRDLPRQGEAKAPEGYTTLLGLISHEHFHTWNVKRLRP EEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCH AELARYDYTQENYTRLLWFFEGFTSYYDDLLLRRAGLIDDATYLRLLAKNINQVLQTPGR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCH RVQSVADASFDAWVKYYRQDENTPNATVSYYTKGALVGLCLDLALRREGRTTLDDVMRAL HHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHH WDRCDAGPMSEDDLLAVLEALSGRPFAREIAEWVHGTGDLPLAEMLAAHGVALRAEAAQP HHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEHHCCH AQRLGLRVSEGQGLQVKVVLRGGLAEEAGFSAGDEWLAVEAQGETWRVQRLDDVALYAGR HHHHCEEEECCCCCEEEEEEECCCHHHCCCCCCCCEEEEEECCCEEEEEECCHHHHHCCC EKRVTALVSRDRRVLRLPLALEREGGAPDDTVALALADAPLARRWLDGQPDTGTAAG CHHHHHHHHCCCEEEECCEEEECCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA