Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is mhpR [H]
Identifier: 120609533
GI number: 120609533
Start: 909231
End: 910145
Strand: Direct
Name: mhpR [H]
Synonym: Aave_0839
Alternate gene names: 120609533
Gene position: 909231-910145 (Clockwise)
Preceding gene: 120609532
Following gene: 120609538
Centisome position: 16.99
GC content: 68.85
Gene sequence:
>915_bases ATGCCCCCCGCATTCGCTGGCCTTCCATTTCCACAGAGAGAACCACCCATGAGTACCGAAGTCCGCTCCGTGCAACGTGC GCTGCTGATCCTGCGCGTCATGAACGAGCGCTCCACCTGGAGCCTGCAGGAACTGCACCAGCGCACGGGCCTCGCCAAAT CCACGCTGCACCGCCTGCTGGGCACGCTGGAGCACGAGAAATACGTGCGCAGCGACCCCCATGCCTACGGGCAGTACCAG TTGACGCTGGCCGTGAGCAACCTCAGCAGCGGCGTGAACGAGAAGCTGCGCCTGGCCGAACTCGCCGCGCCGCTCATGAT CACGGCCACGCGGCAGATCAAGTGGCCGCTGTCGCTCGCCGTGATCGACGGGCACCAGATGCGCGTGGTCTTCTGCACCA TGCCCTACAGCCCCTATGCCATCCGCCCCTCCAGCCTGGGCCGGCGCTACGACCTGATCCCCTCGGCGCTGGGCCGCGCC TACCTCGCCTACTGCACCCGCGCCGAGCGCCGCATCCTCGTGGAGGCCGCCAACACGCATGGCGAGCCGCACCAGAAGAT CACCGACATGTGGGCGCTGCGCCGGATCGTGCAGGAAACGCGCCGCCAGGGCTATGCCATCCGCTATGCGCGCAACAACT CCGAGAGCACGGCGTTCGCGGTGCCGGTGTTCGGCGGTGGCGTGCTGCGCGGCGCGCTGGTGTATTCCACCTTCGCGAGC CAGATGGACGACCGCATGCTCAAGCGCTTCCTCTCGCTCGTGCAGTCCACCGCTTCGCGGATCGGCGAAGAGGCCGCGCA GTCGTCGCAGCTGCCCGGCATGCCGCTGCCGCCGCAGACGGCCGGCATCCTGGCCGCGCCGCAGCCGGCGGCGTATGCCG GCGCCGTGTCGAACGCGCTCTCCGTGGCGGCCTGA
Upstream 100 bases:
>100_bases GAGGCGGCCTGAAGGCATCGGGAAACCTGCCCATGGACCACCTTATTTCCGTTTCTCCAGCGCGCGTGACCGGGGGCCCG CGCGCAATTGCGTTCCCTGA
Downstream 100 bases:
>100_bases AGGCCCTAAGGCAGTTCCGCGCTGGCCATCCTTCCCAGGATCACGCGCGTGCGGCCCGAAAGGTACGCCGAGCCCGGGTT CTTCTCGAAGCGCCTGGGCG
Product: IclR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MPPAFAGLPFPQREPPMSTEVRSVQRALLILRVMNERSTWSLQELHQRTGLAKSTLHRLLGTLEHEKYVRSDPHAYGQYQ LTLAVSNLSSGVNEKLRLAELAAPLMITATRQIKWPLSLAVIDGHQMRVVFCTMPYSPYAIRPSSLGRRYDLIPSALGRA YLAYCTRAERRILVEAANTHGEPHQKITDMWALRRIVQETRRQGYAIRYARNNSESTAFAVPVFGGGVLRGALVYSTFAS QMDDRMLKRFLSLVQSTASRIGEEAAQSSQLPGMPLPPQTAGILAAPQPAAYAGAVSNALSVAA
Sequences:
>Translated_304_residues MPPAFAGLPFPQREPPMSTEVRSVQRALLILRVMNERSTWSLQELHQRTGLAKSTLHRLLGTLEHEKYVRSDPHAYGQYQ LTLAVSNLSSGVNEKLRLAELAAPLMITATRQIKWPLSLAVIDGHQMRVVFCTMPYSPYAIRPSSLGRRYDLIPSALGRA YLAYCTRAERRILVEAANTHGEPHQKITDMWALRRIVQETRRQGYAIRYARNNSESTAFAVPVFGGGVLRGALVYSTFAS QMDDRMLKRFLSLVQSTASRIGEEAAQSSQLPGMPLPPQTAGILAAPQPAAYAGAVSNALSVAA >Mature_303_residues PPAFAGLPFPQREPPMSTEVRSVQRALLILRVMNERSTWSLQELHQRTGLAKSTLHRLLGTLEHEKYVRSDPHAYGQYQL TLAVSNLSSGVNEKLRLAELAAPLMITATRQIKWPLSLAVIDGHQMRVVFCTMPYSPYAIRPSSLGRRYDLIPSALGRAY LAYCTRAERRILVEAANTHGEPHQKITDMWALRRIVQETRRQGYAIRYARNNSESTAFAVPVFGGGVLRGALVYSTFASQ MDDRMLKRFLSLVQSTASRIGEEAAQSSQLPGMPLPPQTAGILAAPQPAAYAGAVSNALSVAA
Specific function: Activator of the mhpRABCDEF operon coding for components of the 3-hydroxyphenylpropionate degradation pathway [H]
COG id: COG1414
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]
Homologues:
Organism=Escherichia coli, GI145693096, Length=228, Percent_Identity=30.7017543859649, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1786468, Length=232, Percent_Identity=29.3103448275862, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1788131, Length=243, Percent_Identity=27.1604938271605, Blast_Score=74, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014757 - InterPro: IPR005471 - InterPro: IPR011991 [H]
Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]
EC number: NA
Molecular weight: Translated: 33556; Mature: 33425
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPAFAGLPFPQREPPMSTEVRSVQRALLILRVMNERSTWSLQELHQRTGLAKSTLHRLL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHH GTLEHEKYVRSDPHAYGQYQLTLAVSNLSSGVNEKLRLAELAAPLMITATRQIKWPLSLA HHHHHHHHHHCCCCCCCEEEEEEEEEHHHCCHHHHHHHHHHHCCHHEEECCEEECCEEEE VIDGHQMRVVFCTMPYSPYAIRPSSLGRRYDLIPSALGRAYLAYCTRAERRILVEAANTH EECCCEEEEEEEECCCCCCEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC GEPHQKITDMWALRRIVQETRRQGYAIRYARNNSESTAFAVPVFGGGVLRGALVYSTFAS CCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHH QMDDRMLKRFLSLVQSTASRIGEEAAQSSQLPGMPLPPQTAGILAAPQPAAYAGAVSNAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH SVAA HHCC >Mature Secondary Structure PPAFAGLPFPQREPPMSTEVRSVQRALLILRVMNERSTWSLQELHQRTGLAKSTLHRLL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHH GTLEHEKYVRSDPHAYGQYQLTLAVSNLSSGVNEKLRLAELAAPLMITATRQIKWPLSLA HHHHHHHHHHCCCCCCCEEEEEEEEEHHHCCHHHHHHHHHHHCCHHEEECCEEECCEEEE VIDGHQMRVVFCTMPYSPYAIRPSSLGRRYDLIPSALGRAYLAYCTRAERRILVEAANTH EECCCEEEEEEEECCCCCCEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC GEPHQKITDMWALRRIVQETRRQGYAIRYARNNSESTAFAVPVFGGGVLRGALVYSTFAS CCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHH QMDDRMLKRFLSLVQSTASRIGEEAAQSSQLPGMPLPPQTAGILAAPQPAAYAGAVSNAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH SVAA HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]