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The map label for this gene is 120609538

Identifier: 120609538

GI number: 120609538

Start: 914907

End: 916577

Strand: Direct

Name: 120609538

Synonym: Aave_0844

Alternate gene names: NA

Gene position: 914907-916577 (Clockwise)

Preceding gene: 120609533

Following gene: 120609540

Centisome position: 17.09

GC content: 74.75

Gene sequence:

>1671_bases
ATGACCGCGCCCGCGCAATCCCCCTGGTTTTCGCCCCTGCTGGCCTGCGGCGCCGCCGTGGCCATCGCATTGCCTTTCCT
GTACGGACACACGACGACGCCGCTGTCCAATTTCTGGCCCCTGGCCGTTTCCGGCCTGTGCGCCCTCGTGGTGGCGGCCG
CCCTGGCCGCCGCCTGGTCGTGCCAGCCAGCCGGCGCGGCGGGCGACGGCCTGCGCGAGGGGGCGGCCAGGGCGGTCGCG
GCCGGCATGCTGCTCGCCGGGCTGGCCGGCGCCGCCATCGGCCTGGCCCAGTTCTTCTGGGGCGATCCCGGCTGGGCGCC
CTGGATCTATCCCTCCACGCACGGCGTCGCCATGGGCAACCTGCGCCAGCGCAACCAGCAGGCCACGCTGCTGTGCATGG
GCGCCTGGGCGCTCGCCTGGTGGGTGGCGCGCACGCACGGCGCGCCGCCGCCGGGCGGCGGGGGCCGGCGCCTGCGGCCC
GCGTCCGTGGCGCTGGGGGTGCTCGCCTTCTGGGCGCTCGCGCTGCTCGCGGCCGGCGCGGCGGCCACGGCGTCGCGCAC
CGGGGCGCTGGAATGGGGCTGCATGCTCGTCCTGCTGCTGCTCTGGCGCCGCTCCCTGGGCGCGCCGGCCCTGGCCCTGG
GCATGGCGGGCATCGCGCTCTATGCCCTGTTCTCCGGGCTGCTGCCCATCCTGCTGGAGCGCTGGACGGGCTTCGCCATG
GACGGCCTGTTCGCCCGCTTCTCGGCGCCCGAGCATGCCTGCGACAACCGCCGCGTGCTCTGGTCCAACGTGCTGCACCT
GATCGCCCAGCGGCCCTGGACGGGATGGGGTTGGGGCGAGCTGTCCTACGCCCACTACATCACCCAGTACCCCGGCAAGC
GCTTCTGCCTGCTGGTGGACAACGCCCACGACCTGCCGCTGCACCTGGCCGTGGAACTGGGCCTGCCTTTCGCCCTGGCC
GCCTGCGGCCTGGCGCTCTGGCTCGTGTGGCGCGCGCGGCCCTGGCGGGAAACCGACCCGGCCCGGCAGCTCGCTTGGGG
GCTGCTGGCCATCGTCGGCGTGCACAGCCTGCTGGAGTTCCCGCTCTGGTACGGGCCCTTCCAGCTGGTGACGGCCTGCG
CGCTCGCGCTGCTCTGGCCCCGCTGCTGGCGGATGCCGGCGCGCGCGGCCCTGCGCGTCCCGCTGCTGTGCGCCGCCGGG
CTGGCGGCGGGCTTCTGGCTGGCCGGCATCGCGTTGCTGGTGCGCGACTACCACCGCGTCTCGCAGCTCTACCTGGCCGT
GGACCAGCGCGATCCCGCCTTCCGGGACGACACCGCGCGGCGCGTCGCCGAATCCACCGTGTTCTTCCGCGACACCCTGG
ATTTCGCCGTGCTCACCACCCTGCAGCCCACGCAGGACAACGCCGTGCGCATGCACGCCCTGTCCAGCCGTCTGCTGCAC
TACTCGCCCGAGCCCCGCGTCATCGAGGCACTCATCGACAGCGCCGCCCGGCTCGGCCTGGACAGCGAGGCCGACTTCCA
TGCGCGGCGCTACCGCGACGTGTATCCGCAGGAATACGCCACCTGGCTGGCCAGGCGGCCGGCGCCGGCTTCCGCGGTCC
AGCCGGCGACGAGCCTGTCCGGACCACGGCCGGGCCTTCTCGGACCGCGGCCGAGCCGCCCCCTGCGCTAG

Upstream 100 bases:

>100_bases
CAGGCGCCGCCGGGCGCCCTATGATCTGGCGCTCGCCGGCGCCTGCCGCGCTCCCCTTCTTCGCGACCGACACCGCCCGC
TTCCGCGTCCTGCACACCCG

Downstream 100 bases:

>100_bases
GGCCTGTTAACGCTACAACAGGCCCCGATCCACCAGGCCGCAGAACGCCACCACTTCGCCGAGGTGGTCCGGGAACGCGC
TCAACGCGTGGTCGCCCCCT

Product: O-antigen polymerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 556; Mature: 555

Protein sequence:

>556_residues
MTAPAQSPWFSPLLACGAAVAIALPFLYGHTTTPLSNFWPLAVSGLCALVVAAALAAAWSCQPAGAAGDGLREGAARAVA
AGMLLAGLAGAAIGLAQFFWGDPGWAPWIYPSTHGVAMGNLRQRNQQATLLCMGAWALAWWVARTHGAPPPGGGGRRLRP
ASVALGVLAFWALALLAAGAAATASRTGALEWGCMLVLLLLWRRSLGAPALALGMAGIALYALFSGLLPILLERWTGFAM
DGLFARFSAPEHACDNRRVLWSNVLHLIAQRPWTGWGWGELSYAHYITQYPGKRFCLLVDNAHDLPLHLAVELGLPFALA
ACGLALWLVWRARPWRETDPARQLAWGLLAIVGVHSLLEFPLWYGPFQLVTACALALLWPRCWRMPARAALRVPLLCAAG
LAAGFWLAGIALLVRDYHRVSQLYLAVDQRDPAFRDDTARRVAESTVFFRDTLDFAVLTTLQPTQDNAVRMHALSSRLLH
YSPEPRVIEALIDSAARLGLDSEADFHARRYRDVYPQEYATWLARRPAPASAVQPATSLSGPRPGLLGPRPSRPLR

Sequences:

>Translated_556_residues
MTAPAQSPWFSPLLACGAAVAIALPFLYGHTTTPLSNFWPLAVSGLCALVVAAALAAAWSCQPAGAAGDGLREGAARAVA
AGMLLAGLAGAAIGLAQFFWGDPGWAPWIYPSTHGVAMGNLRQRNQQATLLCMGAWALAWWVARTHGAPPPGGGGRRLRP
ASVALGVLAFWALALLAAGAAATASRTGALEWGCMLVLLLLWRRSLGAPALALGMAGIALYALFSGLLPILLERWTGFAM
DGLFARFSAPEHACDNRRVLWSNVLHLIAQRPWTGWGWGELSYAHYITQYPGKRFCLLVDNAHDLPLHLAVELGLPFALA
ACGLALWLVWRARPWRETDPARQLAWGLLAIVGVHSLLEFPLWYGPFQLVTACALALLWPRCWRMPARAALRVPLLCAAG
LAAGFWLAGIALLVRDYHRVSQLYLAVDQRDPAFRDDTARRVAESTVFFRDTLDFAVLTTLQPTQDNAVRMHALSSRLLH
YSPEPRVIEALIDSAARLGLDSEADFHARRYRDVYPQEYATWLARRPAPASAVQPATSLSGPRPGLLGPRPSRPLR
>Mature_555_residues
TAPAQSPWFSPLLACGAAVAIALPFLYGHTTTPLSNFWPLAVSGLCALVVAAALAAAWSCQPAGAAGDGLREGAARAVAA
GMLLAGLAGAAIGLAQFFWGDPGWAPWIYPSTHGVAMGNLRQRNQQATLLCMGAWALAWWVARTHGAPPPGGGGRRLRPA
SVALGVLAFWALALLAAGAAATASRTGALEWGCMLVLLLLWRRSLGAPALALGMAGIALYALFSGLLPILLERWTGFAMD
GLFARFSAPEHACDNRRVLWSNVLHLIAQRPWTGWGWGELSYAHYITQYPGKRFCLLVDNAHDLPLHLAVELGLPFALAA
CGLALWLVWRARPWRETDPARQLAWGLLAIVGVHSLLEFPLWYGPFQLVTACALALLWPRCWRMPARAALRVPLLCAAGL
AAGFWLAGIALLVRDYHRVSQLYLAVDQRDPAFRDDTARRVAESTVFFRDTLDFAVLTTLQPTQDNAVRMHALSSRLLHY
SPEPRVIEALIDSAARLGLDSEADFHARRYRDVYPQEYATWLARRPAPASAVQPATSLSGPRPGLLGPRPSRPLR

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60144; Mature: 60012

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPAQSPWFSPLLACGAAVAIALPFLYGHTTTPLSNFWPLAVSGLCALVVAAALAAAWS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
CQPAGAAGDGLREGAARAVAAGMLLAGLAGAAIGLAQFFWGDPGWAPWIYPSTHGVAMGN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECH
LRQRNQQATLLCMGAWALAWWVARTHGAPPPGGGGRRLRPASVALGVLAFWALALLAAGA
HHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCH
AATASRTGALEWGCMLVLLLLWRRSLGAPALALGMAGIALYALFSGLLPILLERWTGFAM
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
DGLFARFSAPEHACDNRRVLWSNVLHLIAQRPWTGWGWGELSYAHYITQYPGKRFCLLVD
HHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEC
NAHDLPLHLAVELGLPFALAACGLALWLVWRARPWRETDPARQLAWGLLAIVGVHSLLEF
CCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
PLWYGPFQLVTACALALLWPRCWRMPARAALRVPLLCAAGLAAGFWLAGIALLVRDYHRV
HHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQLYLAVDQRDPAFRDDTARRVAESTVFFRDTLDFAVLTTLQPTQDNAVRMHALSSRLLH
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHC
YSPEPRVIEALIDSAARLGLDSEADFHARRYRDVYPQEYATWLARRPAPASAVQPATSLS
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHCCCHHHCC
GPRPGLLGPRPSRPLR
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAPAQSPWFSPLLACGAAVAIALPFLYGHTTTPLSNFWPLAVSGLCALVVAAALAAAWS
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
CQPAGAAGDGLREGAARAVAAGMLLAGLAGAAIGLAQFFWGDPGWAPWIYPSTHGVAMGN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECH
LRQRNQQATLLCMGAWALAWWVARTHGAPPPGGGGRRLRPASVALGVLAFWALALLAAGA
HHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCH
AATASRTGALEWGCMLVLLLLWRRSLGAPALALGMAGIALYALFSGLLPILLERWTGFAM
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
DGLFARFSAPEHACDNRRVLWSNVLHLIAQRPWTGWGWGELSYAHYITQYPGKRFCLLVD
HHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEC
NAHDLPLHLAVELGLPFALAACGLALWLVWRARPWRETDPARQLAWGLLAIVGVHSLLEF
CCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
PLWYGPFQLVTACALALLWPRCWRMPARAALRVPLLCAAGLAAGFWLAGIALLVRDYHRV
HHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQLYLAVDQRDPAFRDDTARRVAESTVFFRDTLDFAVLTTLQPTQDNAVRMHALSSRLLH
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHC
YSPEPRVIEALIDSAARLGLDSEADFHARRYRDVYPQEYATWLARRPAPASAVQPATSLS
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHCCCHHHCC
GPRPGLLGPRPSRPLR
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA