Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609531
Identifier: 120609531
GI number: 120609531
Start: 907959
End: 908336
Strand: Direct
Name: 120609531
Synonym: Aave_0837
Alternate gene names: NA
Gene position: 907959-908336 (Clockwise)
Preceding gene: 120609530
Following gene: 120609532
Centisome position: 16.96
GC content: 71.43
Gene sequence:
>378_bases ATGACCTCCTCTGCCCCCGCCCCCCTGCCGCCCGAAGCGGCTGCCGTCCTGCACAGCGTCGACTGGAGCGCCCTGGAATG GGTGCCCGTGCGCCGCGGCATCGAACGCAAGGCGTTCGGCAGCGGCAACGTGACCCTGGCGCTGCACCGCCTGATGCCCG GGCACGAGCCCCGGCCGCACCAGCACCCGAACGAGCAGGTGATGTACATCCTCGCGGGGCAGATGGACGTGCACGTGGAC GGGCAGGTGGTCCGGCTGGGGCCCGGGGGGCTGCTGCTCATTCCTCCCCATGCGCTGCACTACGGCGTGGTGGTGGGCGA CGAGCCCGTGCTCAACCTGGACGTCTTCACGCCCGCGCGGCCGGAATACCTCGCATGA
Upstream 100 bases:
>100_bases TGGTGCGCTCCCCCCTGTCGCCGCTGCAGCTGCGCGCCGTGCTCCAGGCGGACTACGACCTCTGGTCCCGCACCATCCAA TCCCTCCGCATTGCACCCGA
Downstream 100 bases:
>100_bases GCGGCATCCTCCATTCCCTGCCTTCCGGTCCGTCCCCCGCGGCACGGCTGCGCAGCCGCATCCTGGCGCGCGACCGCCTG ATGGCGACCTTCGTGAAGAC
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MTSSAPAPLPPEAAAVLHSVDWSALEWVPVRRGIERKAFGSGNVTLALHRLMPGHEPRPHQHPNEQVMYILAGQMDVHVD GQVVRLGPGGLLLIPPHALHYGVVVGDEPVLNLDVFTPARPEYLA
Sequences:
>Translated_125_residues MTSSAPAPLPPEAAAVLHSVDWSALEWVPVRRGIERKAFGSGNVTLALHRLMPGHEPRPHQHPNEQVMYILAGQMDVHVD GQVVRLGPGGLLLIPPHALHYGVVVGDEPVLNLDVFTPARPEYLA >Mature_124_residues TSSAPAPLPPEAAAVLHSVDWSALEWVPVRRGIERKAFGSGNVTLALHRLMPGHEPRPHQHPNEQVMYILAGQMDVHVDG QVVRLGPGGLLLIPPHALHYGVVVGDEPVLNLDVFTPARPEYLA
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13552; Mature: 13421
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSAPAPLPPEAAAVLHSVDWSALEWVPVRRGIERKAFGSGNVTLALHRLMPGHEPRPH CCCCCCCCCCCHHHHHHHCCCCCCEEEEHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCC QHPNEQVMYILAGQMDVHVDGQVVRLGPGGLLLIPPHALHYGVVVGDEPVLNLDVFTPAR CCCCCEEEEEEECCEEEEECCEEEEECCCCEEEECCCCEEEEEEECCCCEEEEEEECCCC PEYLA CCCCC >Mature Secondary Structure TSSAPAPLPPEAAAVLHSVDWSALEWVPVRRGIERKAFGSGNVTLALHRLMPGHEPRPH CCCCCCCCCCHHHHHHHCCCCCCEEEEHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCC QHPNEQVMYILAGQMDVHVDGQVVRLGPGGLLLIPPHALHYGVVVGDEPVLNLDVFTPAR CCCCCEEEEEEECCEEEEECCEEEEECCCCEEEECCCCEEEEEEECCCCEEEEEEECCCC PEYLA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA