Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609530
Identifier: 120609530
GI number: 120609530
Start: 906952
End: 907962
Strand: Direct
Name: 120609530
Synonym: Aave_0836
Alternate gene names: NA
Gene position: 906952-907962 (Clockwise)
Preceding gene: 120609526
Following gene: 120609531
Centisome position: 16.94
GC content: 69.93
Gene sequence:
>1011_bases ATGCCGTCCAACATCCTGCTGTCACGCCGCCACGCTCTCGCTCTGGGTCTGGGGAGCGCCGTCCTTCCATGGGCCGCCCG TGCCCAGGGGCCGCAGGGTGGGGGCGGCAGCGGCGATTTTCCGACGAAGCCGATCCGCCTGGTGGTGCCCTTCGCTCCGG CGGGCTCGACGGACATCCTCGCCCGGCTGCTCTCCAGGCAGCTCTTCCCCCACAGCGGCCAGCCCATCGTGGTGGAGAAC GTCGCCGGCGCGGGCGGCAACCTGGGGGCCGCCGTGGTGGCGCGCGCACCGGCCGACGGCTACACCCTCGAGATCGGCGC GATGTCCACCCACGCGATGAACGGCAGCCTCTACCGGCAACTGTCGTTCGACCCCATGAACGATTTCGACACCGTCGCCA TGCTGGCCTACGCGATCAACGTGATCGCGGTGTCCGCCAGCATGCCGGTGCATACCTTCCCCGAACTGCTCGCCTACATC CGAGCCAACCCCGGCAAGATCAACTACGCCTCCGGGGGCATCGGCACGCACAACCACCTCACGCTGGCCCTGCTGGCCAG GACCGCCGGCCTGGACATCGTGCACGTGCCCTACAAGGGCGGCGGCCCCGCCGTGGCGGCCCTGGTGCAGGGAGAGTGCC AGATGTTCGCGGGCGGCGCCTCGCTGCTGCTGCCCCATGCGCAGGCCGGGAAGATCCGCCTCATCGCGGTGACCGAGAAG AACCGCACCGACCTGCTGCCCGGCATACCGAGCGTGTCCGAGACGCTCAAGGGCTTCGAGGTGACCAACTGGTATGGCGT GTTCGCTCCGCGCGGCCTCGAGCCGGCGCGCCGCGCGCAGCTCAACGAAGAGATCAACCGCGTCACCGCGCTGCCCGAGA TCGCCGAGCGATTCCGGGGCCTGGGCATGGTGCGCTCCCCCCTGTCGCCGCTGCAGCTGCGCGCCGTGCTCCAGGCGGAC TACGACCTCTGGTCCCGCACCATCCAATCCCTCCGCATTGCACCCGAATGA
Upstream 100 bases:
>100_bases CTCCTATTCGGCGAATATGGCTCCTAGACTTTGCGCATGCGATCCAAAAAATGATTTTTGCATCGTATTTCTCAAATTCA TCAAAGAGGGAATCAAACAC
Downstream 100 bases:
>100_bases CCTCCTCTGCCCCCGCCCCCCTGCCGCCCGAAGCGGCTGCCGTCCTGCACAGCGTCGACTGGAGCGCCCTGGAATGGGTG CCCGTGCGCCGCGGCATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MPSNILLSRRHALALGLGSAVLPWAARAQGPQGGGGSGDFPTKPIRLVVPFAPAGSTDILARLLSRQLFPHSGQPIVVEN VAGAGGNLGAAVVARAPADGYTLEIGAMSTHAMNGSLYRQLSFDPMNDFDTVAMLAYAINVIAVSASMPVHTFPELLAYI RANPGKINYASGGIGTHNHLTLALLARTAGLDIVHVPYKGGGPAVAALVQGECQMFAGGASLLLPHAQAGKIRLIAVTEK NRTDLLPGIPSVSETLKGFEVTNWYGVFAPRGLEPARRAQLNEEINRVTALPEIAERFRGLGMVRSPLSPLQLRAVLQAD YDLWSRTIQSLRIAPE
Sequences:
>Translated_336_residues MPSNILLSRRHALALGLGSAVLPWAARAQGPQGGGGSGDFPTKPIRLVVPFAPAGSTDILARLLSRQLFPHSGQPIVVEN VAGAGGNLGAAVVARAPADGYTLEIGAMSTHAMNGSLYRQLSFDPMNDFDTVAMLAYAINVIAVSASMPVHTFPELLAYI RANPGKINYASGGIGTHNHLTLALLARTAGLDIVHVPYKGGGPAVAALVQGECQMFAGGASLLLPHAQAGKIRLIAVTEK NRTDLLPGIPSVSETLKGFEVTNWYGVFAPRGLEPARRAQLNEEINRVTALPEIAERFRGLGMVRSPLSPLQLRAVLQAD YDLWSRTIQSLRIAPE >Mature_335_residues PSNILLSRRHALALGLGSAVLPWAARAQGPQGGGGSGDFPTKPIRLVVPFAPAGSTDILARLLSRQLFPHSGQPIVVENV AGAGGNLGAAVVARAPADGYTLEIGAMSTHAMNGSLYRQLSFDPMNDFDTVAMLAYAINVIAVSASMPVHTFPELLAYIR ANPGKINYASGGIGTHNHLTLALLARTAGLDIVHVPYKGGGPAVAALVQGECQMFAGGASLLLPHAQAGKIRLIAVTEKN RTDLLPGIPSVSETLKGFEVTNWYGVFAPRGLEPARRAQLNEEINRVTALPEIAERFRGLGMVRSPLSPLQLRAVLQADY DLWSRTIQSLRIAPE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35497; Mature: 35366
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSNILLSRRHALALGLGSAVLPWAARAQGPQGGGGSGDFPTKPIRLVVPFAPAGSTDIL CCCCCEEECCHHHEEECCCHHHCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHH ARLLSRQLFPHSGQPIVVENVAGAGGNLGAAVVARAPADGYTLEIGAMSTHAMNGSLYRQ HHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEECCCEEECCCCCEEEE LSFDPMNDFDTVAMLAYAINVIAVSASMPVHTFPELLAYIRANPGKINYASGGIGTHNHL ECCCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC TLALLARTAGLDIVHVPYKGGGPAVAALVQGECQMFAGGASLLLPHAQAGKIRLIAVTEK CEEEEHHHCCCEEEEECCCCCCHHEEEEECCCEEEEECCCCEEECCCCCCCEEEEEEECC NRTDLLPGIPSVSETLKGFEVTNWYGVFAPRGLEPARRAQLNEEINRVTALPEIAERFRG CCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHC LGMVRSPLSPLQLRAVLQADYDLWSRTIQSLRIAPE CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PSNILLSRRHALALGLGSAVLPWAARAQGPQGGGGSGDFPTKPIRLVVPFAPAGSTDIL CCCCEEECCHHHEEECCCHHHCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHH ARLLSRQLFPHSGQPIVVENVAGAGGNLGAAVVARAPADGYTLEIGAMSTHAMNGSLYRQ HHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEECCCEEECCCCCEEEE LSFDPMNDFDTVAMLAYAINVIAVSASMPVHTFPELLAYIRANPGKINYASGGIGTHNHL ECCCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC TLALLARTAGLDIVHVPYKGGGPAVAALVQGECQMFAGGASLLLPHAQAGKIRLIAVTEK CEEEEHHHCCCEEEEECCCCCCHHEEEEECCCEEEEECCCCEEECCCCCCCEEEEEEECC NRTDLLPGIPSVSETLKGFEVTNWYGVFAPRGLEPARRAQLNEEINRVTALPEIAERFRG CCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHC LGMVRSPLSPLQLRAVLQADYDLWSRTIQSLRIAPE CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]