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The map label for this gene is ocs [H]

Identifier: 120609270

GI number: 120609270

Start: 617680

End: 618762

Strand: Direct

Name: ocs [H]

Synonym: Aave_0569

Alternate gene names: 120609270

Gene position: 617680-618762 (Clockwise)

Preceding gene: 120609236

Following gene: 120609271

Centisome position: 11.54

GC content: 66.67

Gene sequence:

>1083_bases
ATGTGCGACATGGCCAACGAGATTGCTGTTTCGATCATCGGCGCGGGTCACTGCGGGTGCGCCATCGCGGCCGACGTTCT
CGGCCGCGGCGGCAAGGTGCTCCTGTACGCGCACCCGGACCACAGCGCGACGCTTCACGCGATCCTGCGACAGGGCTACC
TCGACGTGACAGGGAGGATGCGTGGCCGCTTCATGCCGGTGCTCAGCAACGACCTCTCCGAAGCGCTCCGGTTCTCGGAC
TGCCTTGTGCTCGCCCTGCCATCGTTCGCGCACGATGACATGATCGCGGCGCTCTCCGCGCATGACCTCGGCCGGCACGT
GATCGTGTGCATCGCCGGCAATTTCTTCTGCCTCGCGACCAGGCGATCGCTCCGGGCGCGCGCAATACTGGAGACCAGTT
CGGCGCCGTATGCCTCACGCGTTGTTGGCGCCGATGTGAAAGTCATGGGCATCAAGTCCCAACTCCACATCGCATCGCTC
GCGCCCATTGGCGATCAGGGAGCGCTGCAGGCGCTGGCGCGTCTGTTCCCCATGCCGCTGCGGTGGTACCGCAATGTGCT
GGAGGCAGGGCTGTCCTGCATCAACGCCGTGCTGCACCCCGTGCCTGCGCTGCTCAACACCGGGTGGATCGAGTCCACCG
CCGGCGACTTCCACTTCTACCGCCAGGGCATGAGCGCATCGGTGGTCCGGGTCATGCAGGCGATCGATCAGGAACGCATG
CGCATCGCCAGTCGGTACGGCCTCTCCGTGCGCTCCGCGGTGGAGATGATGAATGCTTACTACGGCGGGCGATTCGCCAG
CCTGCGCGACTTCGCGCGCGAGAGCGTGGAGCACAACCAGGAGAAGATGGCCCCGTCCAGCATGCAACACCGCTTCATCG
AGCAGGACGTGCCGCTGGTGCTGGTGCCGTGGCACGAGCTCGGCCTGAAAGCCGGCATCGATGCGCTCACGATGCGCGCC
ATTATCCAGATCGCCTCCATCGTGCGCCGCCAGCCACCGCCGGACGAGGACAGTGCGCTGCGGCGGCTTGGACTGGCCGG
GCTCGACCGGCGGGGCATCCTTGCCGCCGTAGCCGCGGGCTGA

Upstream 100 bases:

>100_bases
CAATTGGTGCATTTGCGAGACCAACCCAGGTCGATGGAATCGCGCTCACGGAATCTGCGTGTGCTGGCGGGTTTGATGCG
GCCCGTCCAAGAGCCCACGG

Downstream 100 bases:

>100_bases
GCGCGGGGGCATGCCGTGTCCCCGGGAACGTCAGCGCCGGCTGTGCGCCCGGATGACCCGCGGCGGGCGACATTGCGCGC
CACCGCGTACAAGCTCGCCT

Product: NAD/NADP octopine/nopaline dehydrogenase

Products: NA

Alternate protein names: D-lysopine dehydrogenase; Lysopine synthase; D-octopine dehydrogenase; Octopine synthase [H]

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MCDMANEIAVSIIGAGHCGCAIAADVLGRGGKVLLYAHPDHSATLHAILRQGYLDVTGRMRGRFMPVLSNDLSEALRFSD
CLVLALPSFAHDDMIAALSAHDLGRHVIVCIAGNFFCLATRRSLRARAILETSSAPYASRVVGADVKVMGIKSQLHIASL
APIGDQGALQALARLFPMPLRWYRNVLEAGLSCINAVLHPVPALLNTGWIESTAGDFHFYRQGMSASVVRVMQAIDQERM
RIASRYGLSVRSAVEMMNAYYGGRFASLRDFARESVEHNQEKMAPSSMQHRFIEQDVPLVLVPWHELGLKAGIDALTMRA
IIQIASIVRRQPPPDEDSALRRLGLAGLDRRGILAAVAAG

Sequences:

>Translated_360_residues
MCDMANEIAVSIIGAGHCGCAIAADVLGRGGKVLLYAHPDHSATLHAILRQGYLDVTGRMRGRFMPVLSNDLSEALRFSD
CLVLALPSFAHDDMIAALSAHDLGRHVIVCIAGNFFCLATRRSLRARAILETSSAPYASRVVGADVKVMGIKSQLHIASL
APIGDQGALQALARLFPMPLRWYRNVLEAGLSCINAVLHPVPALLNTGWIESTAGDFHFYRQGMSASVVRVMQAIDQERM
RIASRYGLSVRSAVEMMNAYYGGRFASLRDFARESVEHNQEKMAPSSMQHRFIEQDVPLVLVPWHELGLKAGIDALTMRA
IIQIASIVRRQPPPDEDSALRRLGLAGLDRRGILAAVAAG
>Mature_360_residues
MCDMANEIAVSIIGAGHCGCAIAADVLGRGGKVLLYAHPDHSATLHAILRQGYLDVTGRMRGRFMPVLSNDLSEALRFSD
CLVLALPSFAHDDMIAALSAHDLGRHVIVCIAGNFFCLATRRSLRARAILETSSAPYASRVVGADVKVMGIKSQLHIASL
APIGDQGALQALARLFPMPLRWYRNVLEAGLSCINAVLHPVPALLNTGWIESTAGDFHFYRQGMSASVVRVMQAIDQERM
RIASRYGLSVRSAVEMMNAYYGGRFASLRDFARESVEHNQEKMAPSSMQHRFIEQDVPLVLVPWHELGLKAGIDALTMRA
IIQIASIVRRQPPPDEDSALRRLGLAGLDRRGILAAVAAG

Specific function: Reductive condensation of pyruvate and arginine, lysine, histidine, or octopine to form octopine, lysopine, histopine, or octopinic acid, respectively. NADPH is the preferred cofactor, but NADH can also be used [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lysopine/nopaline/octopine/opine/vitopine dehydrogenases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR011128
- InterPro:   IPR016040
- InterPro:   IPR003421 [H]

Pfam domain/function: PF01210 NAD_Gly3P_dh_N; PF02317 Octopine_DH [H]

EC number: =1.5.1.16; =1.5.1.11 [H]

Molecular weight: Translated: 39144; Mature: 39144

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCDMANEIAVSIIGAGHCGCAIAADVLGRGGKVLLYAHPDHSATLHAILRQGYLDVTGRM
CCCCCCHHEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHH
RGRFMPVLSNDLSEALRFSDCLVLALPSFAHDDMIAALSAHDLGRHVIVCIAGNFFCLAT
CCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEH
RRSLRARAILETSSAPYASRVVGADVKVMGIKSQLHIASLAPIGDQGALQALARLFPMPL
HHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECCCEEEHHCCCCCCHHHHHHHHHHCCCCH
RWYRNVLEAGLSCINAVLHPVPALLNTGWIESTAGDFHFYRQGMSASVVRVMQAIDQERM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH
RIASRYGLSVRSAVEMMNAYYGGRFASLRDFARESVEHNQEKMAPSSMQHRFIEQDVPLV
HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEE
LVPWHELGLKAGIDALTMRAIIQIASIVRRQPPPDEDSALRRLGLAGLDRRGILAAVAAG
EECHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEECCC
>Mature Secondary Structure
MCDMANEIAVSIIGAGHCGCAIAADVLGRGGKVLLYAHPDHSATLHAILRQGYLDVTGRM
CCCCCCHHEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHH
RGRFMPVLSNDLSEALRFSDCLVLALPSFAHDDMIAALSAHDLGRHVIVCIAGNFFCLAT
CCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEH
RRSLRARAILETSSAPYASRVVGADVKVMGIKSQLHIASLAPIGDQGALQALARLFPMPL
HHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECCCEEEHHCCCCCCHHHHHHHHHHCCCCH
RWYRNVLEAGLSCINAVLHPVPALLNTGWIESTAGDFHFYRQGMSASVVRVMQAIDQERM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH
RIASRYGLSVRSAVEMMNAYYGGRFASLRDFARESVEHNQEKMAPSSMQHRFIEQDVPLV
HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEE
LVPWHELGLKAGIDALTMRAIIQIASIVRRQPPPDEDSALRRLGLAGLDRRGILAAVAAG
EECHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA