Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is sam [H]

Identifier: 120609271

GI number: 120609271

Start: 618778

End: 619722

Strand: Direct

Name: sam [H]

Synonym: Aave_0570

Alternate gene names: 120609271

Gene position: 618778-619722 (Clockwise)

Preceding gene: 120609270

Following gene: 120609273

Centisome position: 11.56

GC content: 67.72

Gene sequence:

>945_bases
GTGTCCCCGGGAACGTCAGCGCCGGCTGTGCGCCCGGATGACCCGCGGCGGGCGACATTGCGCGCCACCGCGTACAAGCT
CGCCTCCGCACTGGTGTTGGCGTGCATGTTCGCACTCATCAAGTCGCTCGGCAGCCGCTACCCCATCGGGGAAATCGTCT
TCGCCCGCAGCGCTTTCGCCCTGCTGCCGATCATCGTCGCCCTGCACGCCAGCAGCCAGTGGAGCACGCTGCGCACCTCT
CGTCCGCTCGCTCATCTGCGCCGATCGGTCGCGGGCGTCGCATCGCTGTTCCTGAGCTTCGGCGCGGTCTCGCTGTTGCC
GTTGTCCACCGCCACTGCGCTCACATACTCGGCGCCACTGTTCATCACGCTGCTGTCGATCGTCTTGCTCGGTGAGCAGG
TCACGCTTGGCCGGTGGGCCGCTGTCCTGATCGGGTTCGTGGGCATGCTGATGGTGATCCAGCCTGACCTGGAGGCGGGA
TTGCCCTTGGGCAAGGTTTTGGGTGTGCTGGCCGCCGTCGCGACCGCGGTGGCACTGGTCGCCATCCGGCAGATGGCTGC
CTCGGAATCGGCGCTCGCGATCGCGTTCTACTTCACTCTCTTCGGCACGTTGGTGGGCGCTGCAACCCTGCCACTGCAGG
CAGTGGTTCCCGACGGCGCCGATGCCTTGCGGCTGGTGTCCGTGGGGGTGCTCGGCGGGATGGCGCAGTTGCTGCTCACC
ATGGCCTACCGGCTGGCACCGGCCTCGGTGCTCGCGCCCTACGAATACGCCACGCTGGTGGGCGCGATCCTGGTGGGATT
CATCGTTTGGGGCGAAATGCCTGGGCCCGTCGAATGGCTCGGGATCGTTGTCATCGTCGGCGCCAACGTCGGCATGACGG
CGCATGAGCAGGCCCGGGCGCGGCGTGCGCGCCGTGGTCCGGCATCCGATGGGACGGACGAATGA

Upstream 100 bases:

>100_bases
GCCGGACGAGGACAGTGCGCTGCGGCGGCTTGGACTGGCCGGGCTCGACCGGCGGGGCATCCTTGCCGCCGTAGCCGCGG
GCTGAGCGCGGGGGCATGCC

Downstream 100 bases:

>100_bases
AAGTACGAGCGGTTCGATCTTCGGTGAGGTCTTACCGCAGCGCACGCTCAGCCTTGCGCCATGCGCTGGCTGAGCAGGTC
CGCGAACTCGACCACCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSPGTSAPAVRPDDPRRATLRATAYKLASALVLACMFALIKSLGSRYPIGEIVFARSAFALLPIIVALHASSQWSTLRTS
RPLAHLRRSVAGVASLFLSFGAVSLLPLSTATALTYSAPLFITLLSIVLLGEQVTLGRWAAVLIGFVGMLMVIQPDLEAG
LPLGKVLGVLAAVATAVALVAIRQMAASESALAIAFYFTLFGTLVGAATLPLQAVVPDGADALRLVSVGVLGGMAQLLLT
MAYRLAPASVLAPYEYATLVGAILVGFIVWGEMPGPVEWLGIVVIVGANVGMTAHEQARARRARRGPASDGTDE

Sequences:

>Translated_314_residues
MSPGTSAPAVRPDDPRRATLRATAYKLASALVLACMFALIKSLGSRYPIGEIVFARSAFALLPIIVALHASSQWSTLRTS
RPLAHLRRSVAGVASLFLSFGAVSLLPLSTATALTYSAPLFITLLSIVLLGEQVTLGRWAAVLIGFVGMLMVIQPDLEAG
LPLGKVLGVLAAVATAVALVAIRQMAASESALAIAFYFTLFGTLVGAATLPLQAVVPDGADALRLVSVGVLGGMAQLLLT
MAYRLAPASVLAPYEYATLVGAILVGFIVWGEMPGPVEWLGIVVIVGANVGMTAHEQARARRARRGPASDGTDE
>Mature_313_residues
SPGTSAPAVRPDDPRRATLRATAYKLASALVLACMFALIKSLGSRYPIGEIVFARSAFALLPIIVALHASSQWSTLRTSR
PLAHLRRSVAGVASLFLSFGAVSLLPLSTATALTYSAPLFITLLSIVLLGEQVTLGRWAAVLIGFVGMLMVIQPDLEAGL
PLGKVLGVLAAVATAVALVAIRQMAASESALAIAFYFTLFGTLVGAATLPLQAVVPDGADALRLVSVGVLGGMAQLLLTM
AYRLAPASVLAPYEYATLVGAILVGFIVWGEMPGPVEWLGIVVIVGANVGMTAHEQARARRARRGPASDGTDE

Specific function: Transports S-adenosylmethionine [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32643; Mature: 32512

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPGTSAPAVRPDDPRRATLRATAYKLASALVLACMFALIKSLGSRYPIGEIVFARSAFA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LLPIIVALHASSQWSTLRTSRPLAHLRRSVAGVASLFLSFGAVSLLPLSTATALTYSAPL
HHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FITLLSIVLLGEQVTLGRWAAVLIGFVGMLMVIQPDLEAGLPLGKVLGVLAAVATAVALV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHH
AIRQMAASESALAIAFYFTLFGTLVGAATLPLQAVVPDGADALRLVSVGVLGGMAQLLLT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHH
MAYRLAPASVLAPYEYATLVGAILVGFIVWGEMPGPVEWLGIVVIVGANVGMTAHEQARA
HHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCCCHHHHHHH
RRARRGPASDGTDE
HHHHCCCCCCCCCC
>Mature Secondary Structure 
SPGTSAPAVRPDDPRRATLRATAYKLASALVLACMFALIKSLGSRYPIGEIVFARSAFA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LLPIIVALHASSQWSTLRTSRPLAHLRRSVAGVASLFLSFGAVSLLPLSTATALTYSAPL
HHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FITLLSIVLLGEQVTLGRWAAVLIGFVGMLMVIQPDLEAGLPLGKVLGVLAAVATAVALV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHH
AIRQMAASESALAIAFYFTLFGTLVGAATLPLQAVVPDGADALRLVSVGVLGGMAQLLLT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHH
MAYRLAPASVLAPYEYATLVGAILVGFIVWGEMPGPVEWLGIVVIVGANVGMTAHEQARA
HHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCCCHHHHHHH
RRARRGPASDGTDE
HHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]