Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120609199

Identifier: 120609199

GI number: 120609199

Start: 535815

End: 538340

Strand: Direct

Name: 120609199

Synonym: Aave_0497

Alternate gene names: NA

Gene position: 535815-538340 (Clockwise)

Preceding gene: 120609187

Following gene: 120609200

Centisome position: 10.01

GC content: 66.9

Gene sequence:

>2526_bases
ATGACACGCCGCGTCACCATACAGACGCCCCTGGGAGAGCAGCTGCAGTTCCGGCAGTTGCAGGGGCGAGAAGAACTGAG
CCAGGTTTTCAGCCTGGACATCGACCTGCTGAGCGAGGACAAAAGCATTGACCCGAAGGCGCTGCTGGGCAAGAGCGCCA
CGGTGGTGGTGGAAACCGAAGGCGGCGGCCGGCGCTACCTCGACGGGATCGTGACGCGCTTCGGCACGCAGGGGCAGGAC
CACCGCTTCTATGCCTACCGCCTGCGGCTGCAGCCCTGGATCTGGCTGGCCTCGCGCAAGAGCGATTTCCGGATATTCCA
GAACAAGAGCGTGCCCGACATCATCGAAGAGGTGCTGGGCGTCTATGGATACCCGCTGGAGAAGAAGCTCACCCGCAGCT
ACCGCACCTGGGAATACTGCGTGCAATATGACGAGAGCGACCTGCAGTTCGTCTCGCGGCTGATGGAGCACGAGGGCATC
TATTACTACCATCAGCATGCGCAGGGCCAGCACACGCTCACGCTGGCCGATGACATCGTGGCCTCGCACCAGCCGCTGCC
CGGGGCGTCCACGATTCCCTTCTATCCGCCGGAGAAGTCGGCCACGGCGGACCGCGAGAACATCCACGCGTGGGAGCTGC
ACGAGGAGATCCACTCGGGCCGCTTCTACAACGACGACTACGACTTCAAGAAGCCGAAGGCGGACCTGGCGAACATGCGG
CAGATGCCGCCGGGCCACAGCCACGACGCCTACGAGACCTACGAGTGGCCCGGGGGCTACACGGAGTTCGGCGACGGCGA
GGCGTATGCACGGGTGCGGCTGCAGGAGAACCTGAGCGGGCGCAGCACGGTGCGCGGCGAATCGCGCCACCGGTCCCTGG
CCATGGGCTACCTCTTCACGCTGGAGAACTACCCGCGCGGGGACCAGAACCAGCAGTACCTCATCACCGGCCTGCAATAC
CACTTCAAGGAGAACCCGCGGGTGAGCGCGGCGAACCCCGGGCAAAAAGGCACGGTGCAGGAAGAGGGCTCGTTCCAGCG
GTTCACGCTGCAGGCGCAGCCCACGAGCCTGCCCTACACCCCCGCACGGGTGACGCCCAAGCCCAGGACGACGGGACCGC
AGACGGCGGTGGTGGTGGGCCCGCCGGGCGAGGAGATCTGGCCGGACCAGTACGGGCGGGTGAAGGTACAGTTCCACTGG
GACCGGCAGGGCAAGTTCGACGAGCAGTCCAGCTGCTGGATCCGGGTGTCGCACGGCTGGGCGGGGCAGAACTACGGGAG
CATCTACCTGCCGCGCATAGGCCAAGAGGTCATCATCGATTTCCTGTCCGGAGATCCGGACCAGCCGATCATCACGGGGC
GGGTGTACAACGCGGACCAGATGCCGCCGTGGAAGCTGCCGGAGCACAAGACGCAGTCGGGCACGCTCACGCGCTGGAGC
AAGGGAGGTGGCGGGGCGAGCATGCTGCGCTTCGAGGACCAGAAGGGGATAGAGCACCTGGAGCTGTCGAACACGTACGG
CAACACGTACCTGAACATGGGGTACCTGATGCACCAGGGCACGGGGTCGCAGCGGGGGTACGGCTTCGAGCTGCGCACGG
ACCTGTGGGGCTCGATCCGGGCGGACAAGGGCCTGCTCATCACCACCTATCCGCAGGACTTTACCTCTCGCGTATCGGTG
AATAACCCCGACGGCTTCGACCAGTTGGGCGCGGGCCTGGCCGGCACGGCTTCGCTCATGCAGCAGGCCAGCCAGGCGGC
GCAGACGCTGGACGCGAACCTCGGTGCGCTCAACTCGCTCAAGACCTCGCACATGATGGAACTGGGCGCGGGCATCGCGG
CCATGACCGGCGCGCAGGCGGCATCGGCGTCGATCTCCAAGGCCGCGGCGGCGCTCTCGGCCTTCCAGGGGGGTGGCGGC
GGTGCACCGGAAGCGGCCCTGCCATCCGACACCGATCCGGCCATGCCGCAGTCGCAGGCGCTGCGCGAACTCTCGCGCGA
CATCACGCAGCCCATCGTCTCCATCGTCAGCCCGCAGGGCCACACGATGGTCAGCCCCAAGCCGATCGTCATCAGCTCGG
GCCAGAGCGCGTCGATGCACGCCACGCAGCACATCACCGTCTCCAGCGGCGCGCAGCTCACGCAGCTCGCCAAGGCCGGC
ATGCTGACGCACGTCTCCGAAGGCGGGCAGCGCACCACGGTGGGCGCGGGCGACATCGCCACCGACGCGCAGACGGGCAA
CCTCAACCTCACCGCCCAGCAGAACGCGACCCTGGCCTCGCGCACCGACACCGCCACCGTCGTGGGCCAGCAGAACGTCA
ACCTGCAGGCCACCGAGGACTCGGTGCTCGTCAAGGCCGGCCAGCACATCCGCCTGCAGGCGGGCGCGACGATCACGCTC
ACCGCGGGCGAAGGTGCTTCCATCACCCTCACGAGCGACGGCAAGGTGGAGATCCGCGGCAAGAACGGGCTCATCGAGCT
CAAGGACGTGCTCACCGTGCTCGGCAAGCCCGTCAACATCAACTGA

Upstream 100 bases:

>100_bases
TTGTCCTTCTTGGCGGCTACCCAATATGCCGCCGCCGGCCCTATGATCGCCGCCGTTTTGACTCGTCCGTGCAGCCGCAC
ATGGCTCGCGGCCAACCACC

Downstream 100 bases:

>100_bases
CCTCCCGCGGCCTTGGCCGCGGAACGACCCATGCAGTACCACATCCAGGAAGCCACCTTCGACCTGCCCGAGGGCAGCTT
CATCGACCGCAGCGTGAACG

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; Rhs-Family Protein; VgrG Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; Vgr-Related Protein; RHS Accessory Genetic Element; VgrG Family T6SS G; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element Vgr Family; Rhs Element Vgr ProteinGp5-Like; Vgr Protein; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Vgr Related Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein

Number of amino acids: Translated: 841; Mature: 840

Protein sequence:

>841_residues
MTRRVTIQTPLGEQLQFRQLQGREELSQVFSLDIDLLSEDKSIDPKALLGKSATVVVETEGGGRRYLDGIVTRFGTQGQD
HRFYAYRLRLQPWIWLASRKSDFRIFQNKSVPDIIEEVLGVYGYPLEKKLTRSYRTWEYCVQYDESDLQFVSRLMEHEGI
YYYHQHAQGQHTLTLADDIVASHQPLPGASTIPFYPPEKSATADRENIHAWELHEEIHSGRFYNDDYDFKKPKADLANMR
QMPPGHSHDAYETYEWPGGYTEFGDGEAYARVRLQENLSGRSTVRGESRHRSLAMGYLFTLENYPRGDQNQQYLITGLQY
HFKENPRVSAANPGQKGTVQEEGSFQRFTLQAQPTSLPYTPARVTPKPRTTGPQTAVVVGPPGEEIWPDQYGRVKVQFHW
DRQGKFDEQSSCWIRVSHGWAGQNYGSIYLPRIGQEVIIDFLSGDPDQPIITGRVYNADQMPPWKLPEHKTQSGTLTRWS
KGGGGASMLRFEDQKGIEHLELSNTYGNTYLNMGYLMHQGTGSQRGYGFELRTDLWGSIRADKGLLITTYPQDFTSRVSV
NNPDGFDQLGAGLAGTASLMQQASQAAQTLDANLGALNSLKTSHMMELGAGIAAMTGAQAASASISKAAAALSAFQGGGG
GAPEAALPSDTDPAMPQSQALRELSRDITQPIVSIVSPQGHTMVSPKPIVISSGQSASMHATQHITVSSGAQLTQLAKAG
MLTHVSEGGQRTTVGAGDIATDAQTGNLNLTAQQNATLASRTDTATVVGQQNVNLQATEDSVLVKAGQHIRLQAGATITL
TAGEGASITLTSDGKVEIRGKNGLIELKDVLTVLGKPVNIN

Sequences:

>Translated_841_residues
MTRRVTIQTPLGEQLQFRQLQGREELSQVFSLDIDLLSEDKSIDPKALLGKSATVVVETEGGGRRYLDGIVTRFGTQGQD
HRFYAYRLRLQPWIWLASRKSDFRIFQNKSVPDIIEEVLGVYGYPLEKKLTRSYRTWEYCVQYDESDLQFVSRLMEHEGI
YYYHQHAQGQHTLTLADDIVASHQPLPGASTIPFYPPEKSATADRENIHAWELHEEIHSGRFYNDDYDFKKPKADLANMR
QMPPGHSHDAYETYEWPGGYTEFGDGEAYARVRLQENLSGRSTVRGESRHRSLAMGYLFTLENYPRGDQNQQYLITGLQY
HFKENPRVSAANPGQKGTVQEEGSFQRFTLQAQPTSLPYTPARVTPKPRTTGPQTAVVVGPPGEEIWPDQYGRVKVQFHW
DRQGKFDEQSSCWIRVSHGWAGQNYGSIYLPRIGQEVIIDFLSGDPDQPIITGRVYNADQMPPWKLPEHKTQSGTLTRWS
KGGGGASMLRFEDQKGIEHLELSNTYGNTYLNMGYLMHQGTGSQRGYGFELRTDLWGSIRADKGLLITTYPQDFTSRVSV
NNPDGFDQLGAGLAGTASLMQQASQAAQTLDANLGALNSLKTSHMMELGAGIAAMTGAQAASASISKAAAALSAFQGGGG
GAPEAALPSDTDPAMPQSQALRELSRDITQPIVSIVSPQGHTMVSPKPIVISSGQSASMHATQHITVSSGAQLTQLAKAG
MLTHVSEGGQRTTVGAGDIATDAQTGNLNLTAQQNATLASRTDTATVVGQQNVNLQATEDSVLVKAGQHIRLQAGATITL
TAGEGASITLTSDGKVEIRGKNGLIELKDVLTVLGKPVNIN
>Mature_840_residues
TRRVTIQTPLGEQLQFRQLQGREELSQVFSLDIDLLSEDKSIDPKALLGKSATVVVETEGGGRRYLDGIVTRFGTQGQDH
RFYAYRLRLQPWIWLASRKSDFRIFQNKSVPDIIEEVLGVYGYPLEKKLTRSYRTWEYCVQYDESDLQFVSRLMEHEGIY
YYHQHAQGQHTLTLADDIVASHQPLPGASTIPFYPPEKSATADRENIHAWELHEEIHSGRFYNDDYDFKKPKADLANMRQ
MPPGHSHDAYETYEWPGGYTEFGDGEAYARVRLQENLSGRSTVRGESRHRSLAMGYLFTLENYPRGDQNQQYLITGLQYH
FKENPRVSAANPGQKGTVQEEGSFQRFTLQAQPTSLPYTPARVTPKPRTTGPQTAVVVGPPGEEIWPDQYGRVKVQFHWD
RQGKFDEQSSCWIRVSHGWAGQNYGSIYLPRIGQEVIIDFLSGDPDQPIITGRVYNADQMPPWKLPEHKTQSGTLTRWSK
GGGGASMLRFEDQKGIEHLELSNTYGNTYLNMGYLMHQGTGSQRGYGFELRTDLWGSIRADKGLLITTYPQDFTSRVSVN
NPDGFDQLGAGLAGTASLMQQASQAAQTLDANLGALNSLKTSHMMELGAGIAAMTGAQAASASISKAAAALSAFQGGGGG
APEAALPSDTDPAMPQSQALRELSRDITQPIVSIVSPQGHTMVSPKPIVISSGQSASMHATQHITVSSGAQLTQLAKAGM
LTHVSEGGQRTTVGAGDIATDAQTGNLNLTAQQNATLASRTDTATVVGQQNVNLQATEDSVLVKAGQHIRLQAGATITLT
AGEGASITLTSDGKVEIRGKNGLIELKDVLTVLGKPVNIN

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92264; Mature: 92133

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRVTIQTPLGEQLQFRQLQGREELSQVFSLDIDLLSEDKSIDPKALLGKSATVVVETE
CCCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCEEECCCCCCCHHHHCCCCEEEEEEEC
GGGRRYLDGIVTRFGTQGQDHRFYAYRLRLQPWIWLASRKSDFRIFQNKSVPDIIEEVLG
CCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEECCCCCEEEECCCCCHHHHHHHHH
VYGYPLEKKLTRSYRTWEYCVQYDESDLQFVSRLMEHEGIYYYHQHAQGQHTLTLADDIV
HCCCCHHHHHHHHHHCEEHHEECCCHHHHHHHHHHHHCCEEEEEECCCCCEEEEEHHHHH
ASHQPLPGASTIPFYPPEKSATADRENIHAWELHEEIHSGRFYNDDYDFKKPKADLANMR
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHH
QMPPGHSHDAYETYEWPGGYTEFGDGEAYARVRLQENLSGRSTVRGESRHRSLAMGYLFT
CCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHEEEEEEEEE
LENYPRGDQNQQYLITGLQYHFKENPRVSAANPGQKGTVQEEGSFQRFTLQAQPTSLPYT
ECCCCCCCCCCEEEEEEEEEEECCCCEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC
PARVTPKPRTTGPQTAVVVGPPGEEIWPDQYGRVKVQFHWDRQGKFDEQSSCWIRVSHGW
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCC
AGQNYGSIYLPRIGQEVIIDFLSGDPDQPIITGRVYNADQMPPWKLPEHKTQSGTLTRWS
CCCCCCEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEC
KGGGGASMLRFEDQKGIEHLELSNTYGNTYLNMGYLMHQGTGSQRGYGFELRTDLWGSIR
CCCCCCEEEEECCCCCCCEEEECCCCCCEEEEECEEEECCCCCCCCCCEEECCCCCCCEE
ADKGLLITTYPQDFTSRVSVNNPDGFDQLGAGLAGTASLMQQASQAAQTLDANLGALNSL
CCCCEEEEECCCCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
KTSHMMELGAGIAAMTGAQAASASISKAAAALSAFQGGGGGAPEAALPSDTDPAMPQSQA
HHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
LRELSRDITQPIVSIVSPQGHTMVSPKPIVISSGQSASMHATQHITVSSGAQLTQLAKAG
HHHHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCEEEEEEEEECCCCHHHHHHHHC
MLTHVSEGGQRTTVGAGDIATDAQTGNLNLTAQQNATLASRTDTATVVGQQNVNLQATED
HHEECCCCCCEEEECCCCCCCCCCCCCEEEEECCCCEEECCCCCEEEEECCCCEEEECCC
SVLVKAGQHIRLQAGATITLTAGEGASITLTSDGKVEIRGKNGLIELKDVLTVLGKPVNI
CEEEECCCEEEEECCCEEEEECCCCCEEEEECCCEEEEECCCCCEEHHHHHHHHCCCCCC
N
C
>Mature Secondary Structure 
TRRVTIQTPLGEQLQFRQLQGREELSQVFSLDIDLLSEDKSIDPKALLGKSATVVVETE
CCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCEEECCCCCCCHHHHCCCCEEEEEEEC
GGGRRYLDGIVTRFGTQGQDHRFYAYRLRLQPWIWLASRKSDFRIFQNKSVPDIIEEVLG
CCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEECCCCCEEEECCCCCHHHHHHHHH
VYGYPLEKKLTRSYRTWEYCVQYDESDLQFVSRLMEHEGIYYYHQHAQGQHTLTLADDIV
HCCCCHHHHHHHHHHCEEHHEECCCHHHHHHHHHHHHCCEEEEEECCCCCEEEEEHHHHH
ASHQPLPGASTIPFYPPEKSATADRENIHAWELHEEIHSGRFYNDDYDFKKPKADLANMR
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHH
QMPPGHSHDAYETYEWPGGYTEFGDGEAYARVRLQENLSGRSTVRGESRHRSLAMGYLFT
CCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHEEEEEEEEE
LENYPRGDQNQQYLITGLQYHFKENPRVSAANPGQKGTVQEEGSFQRFTLQAQPTSLPYT
ECCCCCCCCCCEEEEEEEEEEECCCCEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC
PARVTPKPRTTGPQTAVVVGPPGEEIWPDQYGRVKVQFHWDRQGKFDEQSSCWIRVSHGW
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCC
AGQNYGSIYLPRIGQEVIIDFLSGDPDQPIITGRVYNADQMPPWKLPEHKTQSGTLTRWS
CCCCCCEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEC
KGGGGASMLRFEDQKGIEHLELSNTYGNTYLNMGYLMHQGTGSQRGYGFELRTDLWGSIR
CCCCCCEEEEECCCCCCCEEEECCCCCCEEEEECEEEECCCCCCCCCCEEECCCCCCCEE
ADKGLLITTYPQDFTSRVSVNNPDGFDQLGAGLAGTASLMQQASQAAQTLDANLGALNSL
CCCCEEEEECCCCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
KTSHMMELGAGIAAMTGAQAASASISKAAAALSAFQGGGGGAPEAALPSDTDPAMPQSQA
HHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
LRELSRDITQPIVSIVSPQGHTMVSPKPIVISSGQSASMHATQHITVSSGAQLTQLAKAG
HHHHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCEEEEEEEEECCCCHHHHHHHHC
MLTHVSEGGQRTTVGAGDIATDAQTGNLNLTAQQNATLASRTDTATVVGQQNVNLQATED
HHEECCCCCCEEEECCCCCCCCCCCCCEEEEECCCCEEECCCCCEEEEECCCCEEEECCC
SVLVKAGQHIRLQAGATITLTAGEGASITLTSDGKVEIRGKNGLIELKDVLTVLGKPVNI
CEEEECCCEEEEECCCEEEEECCCCCEEEEECCCEEEEECCCCCEEHHHHHHHHCCCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA