Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609199
Identifier: 120609199
GI number: 120609199
Start: 535815
End: 538340
Strand: Direct
Name: 120609199
Synonym: Aave_0497
Alternate gene names: NA
Gene position: 535815-538340 (Clockwise)
Preceding gene: 120609187
Following gene: 120609200
Centisome position: 10.01
GC content: 66.9
Gene sequence:
>2526_bases ATGACACGCCGCGTCACCATACAGACGCCCCTGGGAGAGCAGCTGCAGTTCCGGCAGTTGCAGGGGCGAGAAGAACTGAG CCAGGTTTTCAGCCTGGACATCGACCTGCTGAGCGAGGACAAAAGCATTGACCCGAAGGCGCTGCTGGGCAAGAGCGCCA CGGTGGTGGTGGAAACCGAAGGCGGCGGCCGGCGCTACCTCGACGGGATCGTGACGCGCTTCGGCACGCAGGGGCAGGAC CACCGCTTCTATGCCTACCGCCTGCGGCTGCAGCCCTGGATCTGGCTGGCCTCGCGCAAGAGCGATTTCCGGATATTCCA GAACAAGAGCGTGCCCGACATCATCGAAGAGGTGCTGGGCGTCTATGGATACCCGCTGGAGAAGAAGCTCACCCGCAGCT ACCGCACCTGGGAATACTGCGTGCAATATGACGAGAGCGACCTGCAGTTCGTCTCGCGGCTGATGGAGCACGAGGGCATC TATTACTACCATCAGCATGCGCAGGGCCAGCACACGCTCACGCTGGCCGATGACATCGTGGCCTCGCACCAGCCGCTGCC CGGGGCGTCCACGATTCCCTTCTATCCGCCGGAGAAGTCGGCCACGGCGGACCGCGAGAACATCCACGCGTGGGAGCTGC ACGAGGAGATCCACTCGGGCCGCTTCTACAACGACGACTACGACTTCAAGAAGCCGAAGGCGGACCTGGCGAACATGCGG CAGATGCCGCCGGGCCACAGCCACGACGCCTACGAGACCTACGAGTGGCCCGGGGGCTACACGGAGTTCGGCGACGGCGA GGCGTATGCACGGGTGCGGCTGCAGGAGAACCTGAGCGGGCGCAGCACGGTGCGCGGCGAATCGCGCCACCGGTCCCTGG CCATGGGCTACCTCTTCACGCTGGAGAACTACCCGCGCGGGGACCAGAACCAGCAGTACCTCATCACCGGCCTGCAATAC CACTTCAAGGAGAACCCGCGGGTGAGCGCGGCGAACCCCGGGCAAAAAGGCACGGTGCAGGAAGAGGGCTCGTTCCAGCG GTTCACGCTGCAGGCGCAGCCCACGAGCCTGCCCTACACCCCCGCACGGGTGACGCCCAAGCCCAGGACGACGGGACCGC AGACGGCGGTGGTGGTGGGCCCGCCGGGCGAGGAGATCTGGCCGGACCAGTACGGGCGGGTGAAGGTACAGTTCCACTGG GACCGGCAGGGCAAGTTCGACGAGCAGTCCAGCTGCTGGATCCGGGTGTCGCACGGCTGGGCGGGGCAGAACTACGGGAG CATCTACCTGCCGCGCATAGGCCAAGAGGTCATCATCGATTTCCTGTCCGGAGATCCGGACCAGCCGATCATCACGGGGC GGGTGTACAACGCGGACCAGATGCCGCCGTGGAAGCTGCCGGAGCACAAGACGCAGTCGGGCACGCTCACGCGCTGGAGC AAGGGAGGTGGCGGGGCGAGCATGCTGCGCTTCGAGGACCAGAAGGGGATAGAGCACCTGGAGCTGTCGAACACGTACGG CAACACGTACCTGAACATGGGGTACCTGATGCACCAGGGCACGGGGTCGCAGCGGGGGTACGGCTTCGAGCTGCGCACGG ACCTGTGGGGCTCGATCCGGGCGGACAAGGGCCTGCTCATCACCACCTATCCGCAGGACTTTACCTCTCGCGTATCGGTG AATAACCCCGACGGCTTCGACCAGTTGGGCGCGGGCCTGGCCGGCACGGCTTCGCTCATGCAGCAGGCCAGCCAGGCGGC GCAGACGCTGGACGCGAACCTCGGTGCGCTCAACTCGCTCAAGACCTCGCACATGATGGAACTGGGCGCGGGCATCGCGG CCATGACCGGCGCGCAGGCGGCATCGGCGTCGATCTCCAAGGCCGCGGCGGCGCTCTCGGCCTTCCAGGGGGGTGGCGGC GGTGCACCGGAAGCGGCCCTGCCATCCGACACCGATCCGGCCATGCCGCAGTCGCAGGCGCTGCGCGAACTCTCGCGCGA CATCACGCAGCCCATCGTCTCCATCGTCAGCCCGCAGGGCCACACGATGGTCAGCCCCAAGCCGATCGTCATCAGCTCGG GCCAGAGCGCGTCGATGCACGCCACGCAGCACATCACCGTCTCCAGCGGCGCGCAGCTCACGCAGCTCGCCAAGGCCGGC ATGCTGACGCACGTCTCCGAAGGCGGGCAGCGCACCACGGTGGGCGCGGGCGACATCGCCACCGACGCGCAGACGGGCAA CCTCAACCTCACCGCCCAGCAGAACGCGACCCTGGCCTCGCGCACCGACACCGCCACCGTCGTGGGCCAGCAGAACGTCA ACCTGCAGGCCACCGAGGACTCGGTGCTCGTCAAGGCCGGCCAGCACATCCGCCTGCAGGCGGGCGCGACGATCACGCTC ACCGCGGGCGAAGGTGCTTCCATCACCCTCACGAGCGACGGCAAGGTGGAGATCCGCGGCAAGAACGGGCTCATCGAGCT CAAGGACGTGCTCACCGTGCTCGGCAAGCCCGTCAACATCAACTGA
Upstream 100 bases:
>100_bases TTGTCCTTCTTGGCGGCTACCCAATATGCCGCCGCCGGCCCTATGATCGCCGCCGTTTTGACTCGTCCGTGCAGCCGCAC ATGGCTCGCGGCCAACCACC
Downstream 100 bases:
>100_bases CCTCCCGCGGCCTTGGCCGCGGAACGACCCATGCAGTACCACATCCAGGAAGCCACCTTCGACCTGCCCGAGGGCAGCTT CATCGACCGCAGCGTGAACG
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; Rhs-Family Protein; VgrG Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; Vgr-Related Protein; RHS Accessory Genetic Element; VgrG Family T6SS G; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element Vgr Family; Rhs Element Vgr ProteinGp5-Like; Vgr Protein; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Vgr Related Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein
Number of amino acids: Translated: 841; Mature: 840
Protein sequence:
>841_residues MTRRVTIQTPLGEQLQFRQLQGREELSQVFSLDIDLLSEDKSIDPKALLGKSATVVVETEGGGRRYLDGIVTRFGTQGQD HRFYAYRLRLQPWIWLASRKSDFRIFQNKSVPDIIEEVLGVYGYPLEKKLTRSYRTWEYCVQYDESDLQFVSRLMEHEGI YYYHQHAQGQHTLTLADDIVASHQPLPGASTIPFYPPEKSATADRENIHAWELHEEIHSGRFYNDDYDFKKPKADLANMR QMPPGHSHDAYETYEWPGGYTEFGDGEAYARVRLQENLSGRSTVRGESRHRSLAMGYLFTLENYPRGDQNQQYLITGLQY HFKENPRVSAANPGQKGTVQEEGSFQRFTLQAQPTSLPYTPARVTPKPRTTGPQTAVVVGPPGEEIWPDQYGRVKVQFHW DRQGKFDEQSSCWIRVSHGWAGQNYGSIYLPRIGQEVIIDFLSGDPDQPIITGRVYNADQMPPWKLPEHKTQSGTLTRWS KGGGGASMLRFEDQKGIEHLELSNTYGNTYLNMGYLMHQGTGSQRGYGFELRTDLWGSIRADKGLLITTYPQDFTSRVSV NNPDGFDQLGAGLAGTASLMQQASQAAQTLDANLGALNSLKTSHMMELGAGIAAMTGAQAASASISKAAAALSAFQGGGG GAPEAALPSDTDPAMPQSQALRELSRDITQPIVSIVSPQGHTMVSPKPIVISSGQSASMHATQHITVSSGAQLTQLAKAG MLTHVSEGGQRTTVGAGDIATDAQTGNLNLTAQQNATLASRTDTATVVGQQNVNLQATEDSVLVKAGQHIRLQAGATITL TAGEGASITLTSDGKVEIRGKNGLIELKDVLTVLGKPVNIN
Sequences:
>Translated_841_residues MTRRVTIQTPLGEQLQFRQLQGREELSQVFSLDIDLLSEDKSIDPKALLGKSATVVVETEGGGRRYLDGIVTRFGTQGQD HRFYAYRLRLQPWIWLASRKSDFRIFQNKSVPDIIEEVLGVYGYPLEKKLTRSYRTWEYCVQYDESDLQFVSRLMEHEGI YYYHQHAQGQHTLTLADDIVASHQPLPGASTIPFYPPEKSATADRENIHAWELHEEIHSGRFYNDDYDFKKPKADLANMR QMPPGHSHDAYETYEWPGGYTEFGDGEAYARVRLQENLSGRSTVRGESRHRSLAMGYLFTLENYPRGDQNQQYLITGLQY HFKENPRVSAANPGQKGTVQEEGSFQRFTLQAQPTSLPYTPARVTPKPRTTGPQTAVVVGPPGEEIWPDQYGRVKVQFHW DRQGKFDEQSSCWIRVSHGWAGQNYGSIYLPRIGQEVIIDFLSGDPDQPIITGRVYNADQMPPWKLPEHKTQSGTLTRWS KGGGGASMLRFEDQKGIEHLELSNTYGNTYLNMGYLMHQGTGSQRGYGFELRTDLWGSIRADKGLLITTYPQDFTSRVSV NNPDGFDQLGAGLAGTASLMQQASQAAQTLDANLGALNSLKTSHMMELGAGIAAMTGAQAASASISKAAAALSAFQGGGG GAPEAALPSDTDPAMPQSQALRELSRDITQPIVSIVSPQGHTMVSPKPIVISSGQSASMHATQHITVSSGAQLTQLAKAG MLTHVSEGGQRTTVGAGDIATDAQTGNLNLTAQQNATLASRTDTATVVGQQNVNLQATEDSVLVKAGQHIRLQAGATITL TAGEGASITLTSDGKVEIRGKNGLIELKDVLTVLGKPVNIN >Mature_840_residues TRRVTIQTPLGEQLQFRQLQGREELSQVFSLDIDLLSEDKSIDPKALLGKSATVVVETEGGGRRYLDGIVTRFGTQGQDH RFYAYRLRLQPWIWLASRKSDFRIFQNKSVPDIIEEVLGVYGYPLEKKLTRSYRTWEYCVQYDESDLQFVSRLMEHEGIY YYHQHAQGQHTLTLADDIVASHQPLPGASTIPFYPPEKSATADRENIHAWELHEEIHSGRFYNDDYDFKKPKADLANMRQ MPPGHSHDAYETYEWPGGYTEFGDGEAYARVRLQENLSGRSTVRGESRHRSLAMGYLFTLENYPRGDQNQQYLITGLQYH FKENPRVSAANPGQKGTVQEEGSFQRFTLQAQPTSLPYTPARVTPKPRTTGPQTAVVVGPPGEEIWPDQYGRVKVQFHWD RQGKFDEQSSCWIRVSHGWAGQNYGSIYLPRIGQEVIIDFLSGDPDQPIITGRVYNADQMPPWKLPEHKTQSGTLTRWSK GGGGASMLRFEDQKGIEHLELSNTYGNTYLNMGYLMHQGTGSQRGYGFELRTDLWGSIRADKGLLITTYPQDFTSRVSVN NPDGFDQLGAGLAGTASLMQQASQAAQTLDANLGALNSLKTSHMMELGAGIAAMTGAQAASASISKAAAALSAFQGGGGG APEAALPSDTDPAMPQSQALRELSRDITQPIVSIVSPQGHTMVSPKPIVISSGQSASMHATQHITVSSGAQLTQLAKAGM LTHVSEGGQRTTVGAGDIATDAQTGNLNLTAQQNATLASRTDTATVVGQQNVNLQATEDSVLVKAGQHIRLQAGATITLT AGEGASITLTSDGKVEIRGKNGLIELKDVLTVLGKPVNIN
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92264; Mature: 92133
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRVTIQTPLGEQLQFRQLQGREELSQVFSLDIDLLSEDKSIDPKALLGKSATVVVETE CCCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCEEECCCCCCCHHHHCCCCEEEEEEEC GGGRRYLDGIVTRFGTQGQDHRFYAYRLRLQPWIWLASRKSDFRIFQNKSVPDIIEEVLG CCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEECCCCCEEEECCCCCHHHHHHHHH VYGYPLEKKLTRSYRTWEYCVQYDESDLQFVSRLMEHEGIYYYHQHAQGQHTLTLADDIV HCCCCHHHHHHHHHHCEEHHEECCCHHHHHHHHHHHHCCEEEEEECCCCCEEEEEHHHHH ASHQPLPGASTIPFYPPEKSATADRENIHAWELHEEIHSGRFYNDDYDFKKPKADLANMR HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHH QMPPGHSHDAYETYEWPGGYTEFGDGEAYARVRLQENLSGRSTVRGESRHRSLAMGYLFT CCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHEEEEEEEEE LENYPRGDQNQQYLITGLQYHFKENPRVSAANPGQKGTVQEEGSFQRFTLQAQPTSLPYT ECCCCCCCCCCEEEEEEEEEEECCCCEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC PARVTPKPRTTGPQTAVVVGPPGEEIWPDQYGRVKVQFHWDRQGKFDEQSSCWIRVSHGW CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCC AGQNYGSIYLPRIGQEVIIDFLSGDPDQPIITGRVYNADQMPPWKLPEHKTQSGTLTRWS CCCCCCEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEC KGGGGASMLRFEDQKGIEHLELSNTYGNTYLNMGYLMHQGTGSQRGYGFELRTDLWGSIR CCCCCCEEEEECCCCCCCEEEECCCCCCEEEEECEEEECCCCCCCCCCEEECCCCCCCEE ADKGLLITTYPQDFTSRVSVNNPDGFDQLGAGLAGTASLMQQASQAAQTLDANLGALNSL CCCCEEEEECCCCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH KTSHMMELGAGIAAMTGAQAASASISKAAAALSAFQGGGGGAPEAALPSDTDPAMPQSQA HHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH LRELSRDITQPIVSIVSPQGHTMVSPKPIVISSGQSASMHATQHITVSSGAQLTQLAKAG HHHHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCEEEEEEEEECCCCHHHHHHHHC MLTHVSEGGQRTTVGAGDIATDAQTGNLNLTAQQNATLASRTDTATVVGQQNVNLQATED HHEECCCCCCEEEECCCCCCCCCCCCCEEEEECCCCEEECCCCCEEEEECCCCEEEECCC SVLVKAGQHIRLQAGATITLTAGEGASITLTSDGKVEIRGKNGLIELKDVLTVLGKPVNI CEEEECCCEEEEECCCEEEEECCCCCEEEEECCCEEEEECCCCCEEHHHHHHHHCCCCCC N C >Mature Secondary Structure TRRVTIQTPLGEQLQFRQLQGREELSQVFSLDIDLLSEDKSIDPKALLGKSATVVVETE CCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCEEECCCCCCCHHHHCCCCEEEEEEEC GGGRRYLDGIVTRFGTQGQDHRFYAYRLRLQPWIWLASRKSDFRIFQNKSVPDIIEEVLG CCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEECCCCCEEEECCCCCHHHHHHHHH VYGYPLEKKLTRSYRTWEYCVQYDESDLQFVSRLMEHEGIYYYHQHAQGQHTLTLADDIV HCCCCHHHHHHHHHHCEEHHEECCCHHHHHHHHHHHHCCEEEEEECCCCCEEEEEHHHHH ASHQPLPGASTIPFYPPEKSATADRENIHAWELHEEIHSGRFYNDDYDFKKPKADLANMR HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHH QMPPGHSHDAYETYEWPGGYTEFGDGEAYARVRLQENLSGRSTVRGESRHRSLAMGYLFT CCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHEEEEEEEEE LENYPRGDQNQQYLITGLQYHFKENPRVSAANPGQKGTVQEEGSFQRFTLQAQPTSLPYT ECCCCCCCCCCEEEEEEEEEEECCCCEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC PARVTPKPRTTGPQTAVVVGPPGEEIWPDQYGRVKVQFHWDRQGKFDEQSSCWIRVSHGW CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCC AGQNYGSIYLPRIGQEVIIDFLSGDPDQPIITGRVYNADQMPPWKLPEHKTQSGTLTRWS CCCCCCEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEC KGGGGASMLRFEDQKGIEHLELSNTYGNTYLNMGYLMHQGTGSQRGYGFELRTDLWGSIR CCCCCCEEEEECCCCCCCEEEECCCCCCEEEEECEEEECCCCCCCCCCEEECCCCCCCEE ADKGLLITTYPQDFTSRVSVNNPDGFDQLGAGLAGTASLMQQASQAAQTLDANLGALNSL CCCCEEEEECCCCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH KTSHMMELGAGIAAMTGAQAASASISKAAAALSAFQGGGGGAPEAALPSDTDPAMPQSQA HHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH LRELSRDITQPIVSIVSPQGHTMVSPKPIVISSGQSASMHATQHITVSSGAQLTQLAKAG HHHHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCEEEEEEEEECCCCHHHHHHHHC MLTHVSEGGQRTTVGAGDIATDAQTGNLNLTAQQNATLASRTDTATVVGQQNVNLQATED HHEECCCCCCEEEECCCCCCCCCCCCCEEEEECCCCEEECCCCCEEEEECCCCEEEECCC SVLVKAGQHIRLQAGATITLTAGEGASITLTSDGKVEIRGKNGLIELKDVLTVLGKPVNI CEEEECCCEEEEECCCEEEEECCCCCEEEEECCCEEEEECCCCCEEHHHHHHHHCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA