Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120609200

Identifier: 120609200

GI number: 120609200

Start: 538371

End: 538829

Strand: Direct

Name: 120609200

Synonym: Aave_0498

Alternate gene names: NA

Gene position: 538371-538829 (Clockwise)

Preceding gene: 120609199

Following gene: 120609201

Centisome position: 10.06

GC content: 64.92

Gene sequence:

>459_bases
ATGCAGTACCACATCCAGGAAGCCACCTTCGACCTGCCCGAGGGCAGCTTCATCGACCGCAGCGTGAACGTGCTGGTCTT
CGGTGATCCCGCGCTGCCTTTCAGTGTGGTCATCACGCGCGACTACTTCGACGAGGGAGGAAGCGTCGAGCAGCTGCTGC
GCGAGCAGGTCAAGGCGCTGTCCACGTCGGGCAAGCAGTTCAAGGAACTGGAGTTCGGCACGACCCATCTGCCGTTGAAT
GCGCCGGCGGGAGCACCTTCTTCCGGTGGAGCGCACAACGCTGCGGGTGCCTACGTCACCTACACCAAGCAGGGCCACCC
CATCCACCAGAAGGTCGTGCTCGCTGAGATGCCCGGGCGTCGCGCACTGGTGGTGACCGGCACGTATGCCGGCCTCTGGA
AGGAAGAGCACGTCGCCCACTGGGCCTCGATCCTGCACAGCCTGCGCCTGCGCGCGTGA

Upstream 100 bases:

>100_bases
CGGCAAGAACGGGCTCATCGAGCTCAAGGACGTGCTCACCGTGCTCGGCAAGCCCGTCAACATCAACTGACCTCCCGCGG
CCTTGGCCGCGGAACGACCC

Downstream 100 bases:

>100_bases
GGCTGCCGGTTTCTTTCTCACACCTGCTTTAAACGCACCACGTCATGCCCAAGGCCGCCCGACTGCACGATCCGATCGCC
CATACCTATGCACGCGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MQYHIQEATFDLPEGSFIDRSVNVLVFGDPALPFSVVITRDYFDEGGSVEQLLREQVKALSTSGKQFKELEFGTTHLPLN
APAGAPSSGGAHNAAGAYVTYTKQGHPIHQKVVLAEMPGRRALVVTGTYAGLWKEEHVAHWASILHSLRLRA

Sequences:

>Translated_152_residues
MQYHIQEATFDLPEGSFIDRSVNVLVFGDPALPFSVVITRDYFDEGGSVEQLLREQVKALSTSGKQFKELEFGTTHLPLN
APAGAPSSGGAHNAAGAYVTYTKQGHPIHQKVVLAEMPGRRALVVTGTYAGLWKEEHVAHWASILHSLRLRA
>Mature_152_residues
MQYHIQEATFDLPEGSFIDRSVNVLVFGDPALPFSVVITRDYFDEGGSVEQLLREQVKALSTSGKQFKELEFGTTHLPLN
APAGAPSSGGAHNAAGAYVTYTKQGHPIHQKVVLAEMPGRRALVVTGTYAGLWKEEHVAHWASILHSLRLRA

Specific function: Unknown

COG id: COG5435

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16610; Mature: 16610

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYHIQEATFDLPEGSFIDRSVNVLVFGDPALPFSVVITRDYFDEGGSVEQLLREQVKAL
CCEECCCCEEECCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
STSGKQFKELEFGTTHLPLNAPAGAPSSGGAHNAAGAYVTYTKQGHPIHQKVVLAEMPGR
HCCCCHHEHCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHEEEEEECCCC
RALVVTGTYAGLWKEEHVAHWASILHSLRLRA
EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQYHIQEATFDLPEGSFIDRSVNVLVFGDPALPFSVVITRDYFDEGGSVEQLLREQVKAL
CCEECCCCEEECCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
STSGKQFKELEFGTTHLPLNAPAGAPSSGGAHNAAGAYVTYTKQGHPIHQKVVLAEMPGR
HCCCCHHEHCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHEEEEEECCCC
RALVVTGTYAGLWKEEHVAHWASILHSLRLRA
EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA