Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609178
Identifier: 120609178
GI number: 120609178
Start: 511047
End: 512546
Strand: Direct
Name: 120609178
Synonym: Aave_0475
Alternate gene names: NA
Gene position: 511047-512546 (Clockwise)
Preceding gene: 120609165
Following gene: 120609179
Centisome position: 9.55
GC content: 71.73
Gene sequence:
>1500_bases ATGTCACTCCCCCGCACCGCGGCGAACGAACTGGTCTATACCCACGGCTATTACGAAATCCTGTCTCCCGGCGTGATTGC CGCCGCGCTGGAATCGCGCGGGCAGCGCGCTCCCGACCTGCAGGATCCGCTGTGCTATTTCGAACTGGGCATGGGCTTCG GGGTCTCGCTGCTCGCCCATGCGGCCAGCTTTCCGCACATGCGTTTTTTCGGCAACGACTTCAATCCCGCCCACGTGGCC TATGCGCGGGACCTGGCCCGCGACGCTGGGCTGTCGAACGTGGAGGTGTTCGAGGACGGGTTCGAGGAGTTGCCCGACCG CGACCTGCCGATGATGGATTGCATCGTGATGCACGGCGTGTACTCCTGGGTGTCCCCGGCGCTGCGGCAGGCGATCGTGC GGTTCATCGAGCGCCGCCTCAAGCCCGGCGGCGTGGTCTATGTGAGCTACAACACGCTGCCCGGCTGGGCCCCGCTGCTG CCGCTGCGCGAGCTGTTCCACCTGCATGCCTCGCGCGTGGCCGATCCGGAGTCGGGCGCTGCCGGGCAGCTGCAGGGGGC GCTGGACTTCATCGGCCGGCTCGCGGCCTGCGAGGGCGGCTATGTGCAGGCCCATCCGGCGGTGGCCGAGCGCCTGCGGC ATGCGCAGGTGGAGGGGCCGAACTACGCGCTGCACGAATACGTGGGGCCGGATTCGCATCCGCTGTATTTCCACCAGGTG GCCGCGGAATTCGAGGCGGCCGGACTGTCGTTCGCCGCGCCGGCCCTGCTGGCCGAACAGGTGGACGCCGCCTGCGTGCC GGAGGAACTGGCCGCACTGCTGGAATCGACCCCCGACCCCGTGCTGCGCGAAACGCTGCGCGACTACGGCCTCAACCGCG CCTTCCGCCGGGACCTGTTCGTGCGCGGGGGGCAGGTGCTGGCGCCTGCCGAACAGGTTGCGCGCATGCGGGAGCGGGAG TGGCTGCTGGCCGCGCCGCGCGACGCCCTGCCGCAGTGCGCGGCCCTGCGGCTGGTCGGCCAGTGGCTGGGCGAGGCGGC CTGCACCGATCTGCTCGATGCGCTCGGCGAAGGGCCGGTGCGCCTGGGCGACCTGGCGGCCAGGCCGCAGCTCGGTGGCC TGCCCGCGCAGTCCATCCATGAAGGGCTGCTGCTGCTGTCCAGCAGCGGCGTGGTGATGCCGGCACTGCCTGCCGCGCTG CGCGCCACGGCCCGTGCGTCGGTGCAGGGCTTCAACGCCGCGGTCCTGCAGCGCGGCGGCGAGGACGGCACGCGCCACCT CGTGTGTGGAGCCTCCGGAATCGCGACCGAATGGACGCCCGCCGCGCTGCGGCAGATCCGCGCCGCGCAGAGCCATGGCG GCGACCCGGACGCCATCGCGCGCGCCGTGGCGGAATCGCTGGGCCGCGACGGCGTGCTGGATGCCGCCGAACTCGCGGAA AGCGCCCGGCGATACCTCGCGCAGCGTGCTCCGCTGCTGCGCCGGCTGGAGGTGGTGTGA
Upstream 100 bases:
>100_bases CTGCCGCGCGCCGGACATCGCCCGCGCGCGGGCCAAGCCCTTCGATTGCGCTCCCGGACCGCCGCGCGGCCCGGGGCACC CCCCTCAGAAAGGAACGACG
Downstream 100 bases:
>100_bases TGGCGCGGCCTGCTTCCCGGATGCGGGCCGCCCGCCGCATGCTGGCCGGCGTGTTCGCCCTGTCGGCCGGCGCGGCCATG GCGGCGGGTGCCTACGACTG
Product: type 12 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MSLPRTAANELVYTHGYYEILSPGVIAAALESRGQRAPDLQDPLCYFELGMGFGVSLLAHAASFPHMRFFGNDFNPAHVA YARDLARDAGLSNVEVFEDGFEELPDRDLPMMDCIVMHGVYSWVSPALRQAIVRFIERRLKPGGVVYVSYNTLPGWAPLL PLRELFHLHASRVADPESGAAGQLQGALDFIGRLAACEGGYVQAHPAVAERLRHAQVEGPNYALHEYVGPDSHPLYFHQV AAEFEAAGLSFAAPALLAEQVDAACVPEELAALLESTPDPVLRETLRDYGLNRAFRRDLFVRGGQVLAPAEQVARMRERE WLLAAPRDALPQCAALRLVGQWLGEAACTDLLDALGEGPVRLGDLAARPQLGGLPAQSIHEGLLLLSSSGVVMPALPAAL RATARASVQGFNAAVLQRGGEDGTRHLVCGASGIATEWTPAALRQIRAAQSHGGDPDAIARAVAESLGRDGVLDAAELAE SARRYLAQRAPLLRRLEVV
Sequences:
>Translated_499_residues MSLPRTAANELVYTHGYYEILSPGVIAAALESRGQRAPDLQDPLCYFELGMGFGVSLLAHAASFPHMRFFGNDFNPAHVA YARDLARDAGLSNVEVFEDGFEELPDRDLPMMDCIVMHGVYSWVSPALRQAIVRFIERRLKPGGVVYVSYNTLPGWAPLL PLRELFHLHASRVADPESGAAGQLQGALDFIGRLAACEGGYVQAHPAVAERLRHAQVEGPNYALHEYVGPDSHPLYFHQV AAEFEAAGLSFAAPALLAEQVDAACVPEELAALLESTPDPVLRETLRDYGLNRAFRRDLFVRGGQVLAPAEQVARMRERE WLLAAPRDALPQCAALRLVGQWLGEAACTDLLDALGEGPVRLGDLAARPQLGGLPAQSIHEGLLLLSSSGVVMPALPAAL RATARASVQGFNAAVLQRGGEDGTRHLVCGASGIATEWTPAALRQIRAAQSHGGDPDAIARAVAESLGRDGVLDAAELAE SARRYLAQRAPLLRRLEVV >Mature_498_residues SLPRTAANELVYTHGYYEILSPGVIAAALESRGQRAPDLQDPLCYFELGMGFGVSLLAHAASFPHMRFFGNDFNPAHVAY ARDLARDAGLSNVEVFEDGFEELPDRDLPMMDCIVMHGVYSWVSPALRQAIVRFIERRLKPGGVVYVSYNTLPGWAPLLP LRELFHLHASRVADPESGAAGQLQGALDFIGRLAACEGGYVQAHPAVAERLRHAQVEGPNYALHEYVGPDSHPLYFHQVA AEFEAAGLSFAAPALLAEQVDAACVPEELAALLESTPDPVLRETLRDYGLNRAFRRDLFVRGGQVLAPAEQVARMREREW LLAAPRDALPQCAALRLVGQWLGEAACTDLLDALGEGPVRLGDLAARPQLGGLPAQSIHEGLLLLSSSGVVMPALPAALR ATARASVQGFNAAVLQRGGEDGTRHLVCGASGIATEWTPAALRQIRAAQSHGGDPDAIARAVAESLGRDGVLDAAELAES ARRYLAQRAPLLRRLEVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To R.prowazekii RP789, RP027 and RP028 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013217 - InterPro: IPR018773 [H]
Pfam domain/function: PF08242 Methyltransf_12; PF10119 MethyTransf_Reg [H]
EC number: NA
Molecular weight: Translated: 53693; Mature: 53562
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPRTAANELVYTHGYYEILSPGVIAAALESRGQRAPDLQDPLCYFELGMGFGVSLLAH CCCCCHHHHCEEEECCHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHH AASFPHMRFFGNDFNPAHVAYARDLARDAGLSNVEVFEDGFEELPDRDLPMMDCIVMHGV HHCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH YSWVSPALRQAIVRFIERRLKPGGVVYVSYNTLPGWAPLLPLRELFHLHASRVADPESGA HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC AGQLQGALDFIGRLAACEGGYVQAHPAVAERLRHAQVEGPNYALHEYVGPDSHPLYFHQV CHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHH AAEFEAAGLSFAAPALLAEQVDAACVPEELAALLESTPDPVLRETLRDYGLNRAFRRDLF HHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH VRGGQVLAPAEQVARMREREWLLAAPRDALPQCAALRLVGQWLGEAACTDLLDALGEGPV HCCCCEECCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RLGDLAARPQLGGLPAQSIHEGLLLLSSSGVVMPALPAALRATARASVQGFNAAVLQRGG EECHHHCCCCCCCCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCC EDGTRHLVCGASGIATEWTPAALRQIRAAQSHGGDPDAIARAVAESLGRDGVLDAAELAE CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHH SARRYLAQRAPLLRRLEVV HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLPRTAANELVYTHGYYEILSPGVIAAALESRGQRAPDLQDPLCYFELGMGFGVSLLAH CCCCHHHHCEEEECCHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHH AASFPHMRFFGNDFNPAHVAYARDLARDAGLSNVEVFEDGFEELPDRDLPMMDCIVMHGV HHCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH YSWVSPALRQAIVRFIERRLKPGGVVYVSYNTLPGWAPLLPLRELFHLHASRVADPESGA HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC AGQLQGALDFIGRLAACEGGYVQAHPAVAERLRHAQVEGPNYALHEYVGPDSHPLYFHQV CHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHH AAEFEAAGLSFAAPALLAEQVDAACVPEELAALLESTPDPVLRETLRDYGLNRAFRRDLF HHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH VRGGQVLAPAEQVARMREREWLLAAPRDALPQCAALRLVGQWLGEAACTDLLDALGEGPV HCCCCEECCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RLGDLAARPQLGGLPAQSIHEGLLLLSSSGVVMPALPAALRATARASVQGFNAAVLQRGG EECHHHCCCCCCCCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCC EDGTRHLVCGASGIATEWTPAALRQIRAAQSHGGDPDAIARAVAESLGRDGVLDAAELAE CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHH SARRYLAQRAPLLRRLEVV HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]