Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609165
Identifier: 120609165
GI number: 120609165
Start: 500850
End: 501380
Strand: Direct
Name: 120609165
Synonym: Aave_0462
Alternate gene names: NA
Gene position: 500850-501380 (Clockwise)
Preceding gene: 120609164
Following gene: 120609178
Centisome position: 9.36
GC content: 73.82
Gene sequence:
>531_bases ATGCCCGACCCGACGGACGCCTGCACGGTTCGCGCCCGCAGTGGATGGGGCGGCCGGCTCCGCGCCACCGCGGTGCCGGC CGCCGGGGCGCGGTTGCCGCTGCGCCGGGCGCTGGTGTCGGTGCCCGCCGCCACGCCTGCTACCGCAGCGGACGGCCCCC TCCCTGGCGGTGGCGACGTTGCACCGGTCTCGCCCGCGCGGCAGTTGCTCGAGCGCTTCCAGTTCTGCGAGCTGGATGCC ATGCCCCAGGGCCGCATGCGCCAGGTGGTGGAGTTCCTCGGGGGCCGTGGCCGCGCCTTGCGGACCGCGCCGCTGCGTGC CAACTGGAAGGCCCTGCGCCTAGCCTTCGAAGAGCCCGCGCTGCGGGCGCTCCTCATCGAACACACCGACGAAGTGGTCG AGTTCCTGATGCGGCCCGATGTCGCCGGCGAAGGCCGACAGCCCGTGGGGGAGTCCCTCCCGGGCGGGATGCTCCTGCCG TCCTCCTTTTCTCCAGCGGGTGCTTCGTCGGGATTGCTGGCTTCGCGGTGA
Upstream 100 bases:
>100_bases CCACCTGGCAGGCCGACAGTGCCGTGCGCGCCGCGGAAGACCATCGCCGTCCCGCCCGCGAGGGCGCGCAGAACGTCTGA CCCTCGCACCAGGCCGCCCC
Downstream 100 bases:
>100_bases CTGGCGCAGTTCCTGCGGCATGGCTTGTCCAGGCTCGGGTTGGCGCCTCGGCCCGGAAGGGACGGGGCCTCCCCGTGGCC GGATCCGGGCGGGGAGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MPDPTDACTVRARSGWGGRLRATAVPAAGARLPLRRALVSVPAATPATAADGPLPGGGDVAPVSPARQLLERFQFCELDA MPQGRMRQVVEFLGGRGRALRTAPLRANWKALRLAFEEPALRALLIEHTDEVVEFLMRPDVAGEGRQPVGESLPGGMLLP SSFSPAGASSGLLASR
Sequences:
>Translated_176_residues MPDPTDACTVRARSGWGGRLRATAVPAAGARLPLRRALVSVPAATPATAADGPLPGGGDVAPVSPARQLLERFQFCELDA MPQGRMRQVVEFLGGRGRALRTAPLRANWKALRLAFEEPALRALLIEHTDEVVEFLMRPDVAGEGRQPVGESLPGGMLLP SSFSPAGASSGLLASR >Mature_175_residues PDPTDACTVRARSGWGGRLRATAVPAAGARLPLRRALVSVPAATPATAADGPLPGGGDVAPVSPARQLLERFQFCELDAM PQGRMRQVVEFLGGRGRALRTAPLRANWKALRLAFEEPALRALLIEHTDEVVEFLMRPDVAGEGRQPVGESLPGGMLLPS SFSPAGASSGLLASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18499; Mature: 18367
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPTDACTVRARSGWGGRLRATAVPAAGARLPLRRALVSVPAATPATAADGPLPGGGDV CCCCCCCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC APVSPARQLLERFQFCELDAMPQGRMRQVVEFLGGRGRALRTAPLRANWKALRLAFEEPA CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCHH LRALLIEHTDEVVEFLMRPDVAGEGRQPVGESLPGGMLLPSSFSPAGASSGLLASR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure PDPTDACTVRARSGWGGRLRATAVPAAGARLPLRRALVSVPAATPATAADGPLPGGGDV CCCCCCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC APVSPARQLLERFQFCELDAMPQGRMRQVVEFLGGRGRALRTAPLRANWKALRLAFEEPA CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCHH LRALLIEHTDEVVEFLMRPDVAGEGRQPVGESLPGGMLLPSSFSPAGASSGLLASR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA