Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609164
Identifier: 120609164
GI number: 120609164
Start: 499120
End: 500829
Strand: Direct
Name: 120609164
Synonym: Aave_0461
Alternate gene names: NA
Gene position: 499120-500829 (Clockwise)
Preceding gene: 120609163
Following gene: 120609165
Centisome position: 9.32
GC content: 70.18
Gene sequence:
>1710_bases ATGACTTTACTTTCTTCGGTCAACAGGTCATACAGCACCCCTGTTTCCGCCGATCAGGCCTCCACTTCGCAGGCCGGTGC CTCCGCCACCCTTCTCCCGGCGTCCCGCGGAAGCCGGCGCCTCGGCGCCGACGGGGGGCTGCCGGTGCGCCATGCCGGGG GACACGCCCGCCCGGACGCGCTGTCGGCTCCGCGAGTCTCGCTGGAGCTGTCGCCCCAGCGGGAGATGGTGCCCCTGCGG GACCTCTCCGTGCTGCTGTCGGACCATCCTTCGTTCCGGACGGAGGTGTCGCACTACTCCGACGCCCTTCCGGACGAGTT GCCCTACGTCGAATTGTCTCCCTCCGGCTCGCCGGCGATCCGTGAAGCGGATGCCCCGGGCGGCGCCCATGAATCCTTCC GCACCGCCCTGAGCGAAACGCAAACCTCCCGCTCCGGAAGTGGCGATGGCCGCGCGGACGTGCCTGCGCGGCAGAGCTGG CGGCAGATGGCGGCCGCGGCACTGCGCCACAGGGCATCCGCCGTCGGCAGCGCCGTGCAGAGCGGTGGCGCGGCGTTGGG GCGCACGGCGATGGCACCGGTGTCCGTGGCCCGCAGCGGCGTCTCCGCGGCATGGAATCTGGGCAGCCAGGCCTGGCGCA TTCCGAAGGTGGTCGTCGGCCACCTGACGCACCAGGGCATCTCCGTGGGGGTGACCACCGCGGTGCGCGAGGTGGCGGCG GAGGCCCTGATCGCGGGACTGCGCCAGGCGCCGGCCGGGGCGCTGCTGGGCATCGAGATCGGCATGGGCATCGTCAACAT GTCGCTGCAGGCGCTGCGCCAGGCGCGCGAGAGGCGCAATCCCGATGAGGCGGCGCGCGGCTTCCATGCGCTGAGCCCCG AGCAGTGGGCGAGCAAGACGCCGGAGGAACAGGCCCTGCTGCGCAAGGAGCAGCAGCACCACTCCGACCGAGTCGCTTCG CTGCAGATGGCGTCGCTGATGGTGAACGTGGGTTTCGCGGCGTACGGCGCGGCGCACGGCGACAACTCCTTCGCGGCATC CAGCATCGCGAGCGAGGCCAAGGTGATCGCCTACTCGGTGCTGCGGGACGGCATCCAGTCCAAGTTCGGCATGATCAAGC TGGACAAGGAAAGCCATGGGGTGAGCGGCAGCCACATCGCCGGTGCGTCGCTGTTCTACGGCGCCGCCAACCTGGCGGGC GGCTATGCCTGGAGCGCGCTGCCGCCCCTGGGCCTGCCGCCGGGCGTCACGACGGCGAACGTGCGCGACGTGCTGCGCGG CGTGCCGGTCGAGGGTGTGTCCCTGCAGGACGCGGTCGGTGCCACGGCCAAGATGGTCGGCGTGAAGGCCGCCATCAACA CCGTGCTGGAGGCCTCGGACTGGTTCTCCGTGACCGAGCAGGAAGCACGGCAGGCAGGCGCGAAGCAGCAGTTGGCCCCG CACATCAAGGGCAATGATTTCGGACGCATGAAGGACCATGTCCCGGCCCGGATCGCGATCATCGACAGTTCCAACTCGAT CGCAGACCTGGTCGGCTTCCTGACCAAGGATATGCCGCCCTCGGCCAGCGCCCTGCTGACCAACAGCGCGCTGGGCTTGT GGGCCGGGGTGAACTACAGGACCATCGGTGCCACCTGGCAGGCCGACAGTGCCGTGCGCGCCGCGGAAGACCATCGCCGT CCCGCCCGCGAGGGCGCGCAGAACGTCTGA
Upstream 100 bases:
>100_bases GGCGCCATCGCCCAGGGCTTCCAGGTTCCCGGTTCCTCCGGGGCATCCCCTTCTCCTTCCCAGCCGTTGCGCGGCGCCAG CGAACCCCAGGAGTGACGAC
Downstream 100 bases:
>100_bases CCCTCGCACCAGGCCGCCCCATGCCCGACCCGACGGACGCCTGCACGGTTCGCGCCCGCAGTGGATGGGGCGGCCGGCTC CGCGCCACCGCGGTGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 569; Mature: 568
Protein sequence:
>569_residues MTLLSSVNRSYSTPVSADQASTSQAGASATLLPASRGSRRLGADGGLPVRHAGGHARPDALSAPRVSLELSPQREMVPLR DLSVLLSDHPSFRTEVSHYSDALPDELPYVELSPSGSPAIREADAPGGAHESFRTALSETQTSRSGSGDGRADVPARQSW RQMAAAALRHRASAVGSAVQSGGAALGRTAMAPVSVARSGVSAAWNLGSQAWRIPKVVVGHLTHQGISVGVTTAVREVAA EALIAGLRQAPAGALLGIEIGMGIVNMSLQALRQARERRNPDEAARGFHALSPEQWASKTPEEQALLRKEQQHHSDRVAS LQMASLMVNVGFAAYGAAHGDNSFAASSIASEAKVIAYSVLRDGIQSKFGMIKLDKESHGVSGSHIAGASLFYGAANLAG GYAWSALPPLGLPPGVTTANVRDVLRGVPVEGVSLQDAVGATAKMVGVKAAINTVLEASDWFSVTEQEARQAGAKQQLAP HIKGNDFGRMKDHVPARIAIIDSSNSIADLVGFLTKDMPPSASALLTNSALGLWAGVNYRTIGATWQADSAVRAAEDHRR PAREGAQNV
Sequences:
>Translated_569_residues MTLLSSVNRSYSTPVSADQASTSQAGASATLLPASRGSRRLGADGGLPVRHAGGHARPDALSAPRVSLELSPQREMVPLR DLSVLLSDHPSFRTEVSHYSDALPDELPYVELSPSGSPAIREADAPGGAHESFRTALSETQTSRSGSGDGRADVPARQSW RQMAAAALRHRASAVGSAVQSGGAALGRTAMAPVSVARSGVSAAWNLGSQAWRIPKVVVGHLTHQGISVGVTTAVREVAA EALIAGLRQAPAGALLGIEIGMGIVNMSLQALRQARERRNPDEAARGFHALSPEQWASKTPEEQALLRKEQQHHSDRVAS LQMASLMVNVGFAAYGAAHGDNSFAASSIASEAKVIAYSVLRDGIQSKFGMIKLDKESHGVSGSHIAGASLFYGAANLAG GYAWSALPPLGLPPGVTTANVRDVLRGVPVEGVSLQDAVGATAKMVGVKAAINTVLEASDWFSVTEQEARQAGAKQQLAP HIKGNDFGRMKDHVPARIAIIDSSNSIADLVGFLTKDMPPSASALLTNSALGLWAGVNYRTIGATWQADSAVRAAEDHRR PAREGAQNV >Mature_568_residues TLLSSVNRSYSTPVSADQASTSQAGASATLLPASRGSRRLGADGGLPVRHAGGHARPDALSAPRVSLELSPQREMVPLRD LSVLLSDHPSFRTEVSHYSDALPDELPYVELSPSGSPAIREADAPGGAHESFRTALSETQTSRSGSGDGRADVPARQSWR QMAAAALRHRASAVGSAVQSGGAALGRTAMAPVSVARSGVSAAWNLGSQAWRIPKVVVGHLTHQGISVGVTTAVREVAAE ALIAGLRQAPAGALLGIEIGMGIVNMSLQALRQARERRNPDEAARGFHALSPEQWASKTPEEQALLRKEQQHHSDRVASL QMASLMVNVGFAAYGAAHGDNSFAASSIASEAKVIAYSVLRDGIQSKFGMIKLDKESHGVSGSHIAGASLFYGAANLAGG YAWSALPPLGLPPGVTTANVRDVLRGVPVEGVSLQDAVGATAKMVGVKAAINTVLEASDWFSVTEQEARQAGAKQQLAPH IKGNDFGRMKDHVPARIAIIDSSNSIADLVGFLTKDMPPSASALLTNSALGLWAGVNYRTIGATWQADSAVRAAEDHRRP AREGAQNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59323; Mature: 59192
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLSSVNRSYSTPVSADQASTSQAGASATLLPASRGSRRLGADGGLPVRHAGGHARPDA CCCHHHHCCCCCCCCCCCCCCCHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC LSAPRVSLELSPQREMVPLRDLSVLLSDHPSFRTEVSHYSDALPDELPYVELSPSGSPAI CCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCC READAPGGAHESFRTALSETQTSRSGSGDGRADVPARQSWRQMAAAALRHRASAVGSAVQ CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SGGAALGRTAMAPVSVARSGVSAAWNLGSQAWRIPKVVVGHLTHQGISVGVTTAVREVAA HCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EALIAGLRQAPAGALLGIEIGMGIVNMSLQALRQARERRNPDEAARGFHALSPEQWASKT HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHCCC PEEQALLRKEQQHHSDRVASLQMASLMVNVGFAAYGAAHGDNSFAASSIASEAKVIAYSV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LRDGIQSKFGMIKLDKESHGVSGSHIAGASLFYGAANLAGGYAWSALPPLGLPPGVTTAN HHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCHHH VRDVLRGVPVEGVSLQDAVGATAKMVGVKAAINTVLEASDWFSVTEQEARQAGAKQQLAP HHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC HIKGNDFGRMKDHVPARIAIIDSSNSIADLVGFLTKDMPPSASALLTNSALGLWAGVNYR CCCCCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCCCEE TIGATWQADSAVRAAEDHRRPAREGAQNV EECCCCCCCHHHHHHHHHCCHHHHCCCCC >Mature Secondary Structure TLLSSVNRSYSTPVSADQASTSQAGASATLLPASRGSRRLGADGGLPVRHAGGHARPDA CCHHHHCCCCCCCCCCCCCCCHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC LSAPRVSLELSPQREMVPLRDLSVLLSDHPSFRTEVSHYSDALPDELPYVELSPSGSPAI CCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCC READAPGGAHESFRTALSETQTSRSGSGDGRADVPARQSWRQMAAAALRHRASAVGSAVQ CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SGGAALGRTAMAPVSVARSGVSAAWNLGSQAWRIPKVVVGHLTHQGISVGVTTAVREVAA HCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EALIAGLRQAPAGALLGIEIGMGIVNMSLQALRQARERRNPDEAARGFHALSPEQWASKT HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHCCC PEEQALLRKEQQHHSDRVASLQMASLMVNVGFAAYGAAHGDNSFAASSIASEAKVIAYSV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LRDGIQSKFGMIKLDKESHGVSGSHIAGASLFYGAANLAGGYAWSALPPLGLPPGVTTAN HHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCHHH VRDVLRGVPVEGVSLQDAVGATAKMVGVKAAINTVLEASDWFSVTEQEARQAGAKQQLAP HHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC HIKGNDFGRMKDHVPARIAIIDSSNSIADLVGFLTKDMPPSASALLTNSALGLWAGVNYR CCCCCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCCCEE TIGATWQADSAVRAAEDHRRPAREGAQNV EECCCCCCCHHHHHHHHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA