Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120609163
Identifier: 120609163
GI number: 120609163
Start: 498624
End: 499115
Strand: Direct
Name: 120609163
Synonym: Aave_0460
Alternate gene names: NA
Gene position: 498624-499115 (Clockwise)
Preceding gene: 120609162
Following gene: 120609164
Centisome position: 9.32
GC content: 72.15
Gene sequence:
>492_bases ATGAACGCCCCGCTCGACCTGTCGAACCATTCGCCCGTGCCCGCGCAGGAATTCGAAGCTTCGCCGGCCCTGCAGGCCCT GGTGTGCGATGCCGCGCTGGTGCTGGGCGCCAGCGCCGGACAGGCACAGGAGGCCGCGCGCACAGGCCGTCTCGAACTGG AGCGGCACACCGTCGCGGTGACGGCCGATGCCGGCGAAGAGACGCTGCTGCTATCGGTGGACCTGGGGCCGTCCTACCTG GCCGAACCCGGCCGCGCACAGGCCGCGCTGGTCGCCAACATGCACCTCTTCGTCAAGGCTGGTGTCACGTTCGCCCGGGG CCTCGCCGGCCCCGTGCTCGTCGGCCGCTGGCCCGCGGCCGATGCGCCGGCGCTTGCCAATGGCGTGCGCCAGATGGGCG CCATCGCCCAGGGCTTCCAGGTTCCCGGTTCCTCCGGGGCATCCCCTTCTCCTTCCCAGCCGTTGCGCGGCGCCAGCGAA CCCCAGGAGTGA
Upstream 100 bases:
>100_bases CGCTCGCGGCGCATTTCGACGGCATGCTGTCGCTGTGCGAAGCCGTCGCCACCGGTGCACAGGCGCTGGCCCAGGCCGGC CAGCCTGGCAAGGAGGCCGC
Downstream 100 bases:
>100_bases CGACATGACTTTACTTTCTTCGGTCAACAGGTCATACAGCACCCCTGTTTCCGCCGATCAGGCCTCCACTTCGCAGGCCG GTGCCTCCGCCACCCTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MNAPLDLSNHSPVPAQEFEASPALQALVCDAALVLGASAGQAQEAARTGRLELERHTVAVTADAGEETLLLSVDLGPSYL AEPGRAQAALVANMHLFVKAGVTFARGLAGPVLVGRWPAADAPALANGVRQMGAIAQGFQVPGSSGASPSPSQPLRGASE PQE
Sequences:
>Translated_163_residues MNAPLDLSNHSPVPAQEFEASPALQALVCDAALVLGASAGQAQEAARTGRLELERHTVAVTADAGEETLLLSVDLGPSYL AEPGRAQAALVANMHLFVKAGVTFARGLAGPVLVGRWPAADAPALANGVRQMGAIAQGFQVPGSSGASPSPSQPLRGASE PQE >Mature_163_residues MNAPLDLSNHSPVPAQEFEASPALQALVCDAALVLGASAGQAQEAARTGRLELERHTVAVTADAGEETLLLSVDLGPSYL AEPGRAQAALVANMHLFVKAGVTFARGLAGPVLVGRWPAADAPALANGVRQMGAIAQGFQVPGSSGASPSPSQPLRGASE PQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16496; Mature: 16496
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPLDLSNHSPVPAQEFEASPALQALVCDAALVLGASAGQAQEAARTGRLELERHTVAV CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECEEEEE TADAGEETLLLSVDLGPSYLAEPGRAQAALVANMHLFVKAGVTFARGLAGPVLVGRWPAA EECCCCCEEEEEEECCHHHHCCCCCCCEEHHHHHHHEEHHCHHHHHHCCCCEEEECCCCC DAPALANGVRQMGAIAQGFQVPGSSGASPSPSQPLRGASEPQE CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNAPLDLSNHSPVPAQEFEASPALQALVCDAALVLGASAGQAQEAARTGRLELERHTVAV CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECEEEEE TADAGEETLLLSVDLGPSYLAEPGRAQAALVANMHLFVKAGVTFARGLAGPVLVGRWPAA EECCCCCEEEEEEECCHHHHCCCCCCCEEHHHHHHHEEHHCHHHHHHCCCCEEEECCCCC DAPALANGVRQMGAIAQGFQVPGSSGASPSPSQPLRGASEPQE CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA