Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609162
Identifier: 120609162
GI number: 120609162
Start: 498139
End: 498627
Strand: Direct
Name: 120609162
Synonym: Aave_0459
Alternate gene names: NA
Gene position: 498139-498627 (Clockwise)
Preceding gene: 120609160
Following gene: 120609163
Centisome position: 9.31
GC content: 70.14
Gene sequence:
>489_bases ATGACAAGCAAAACAACCGAATCCGCGCAGGCGCACGTGCCGCAACGGATCCCTTTATCTCCCGCGCGCCGCGCCTGCCT GGGGGCCGCATTGCGGCACATGGGGGCGGACGACCACTCCGCGCGCTCCTTCGCCGATGAGGGCATGGTGATGGTGAACG ACATCCTGCTGGCCATCGCGTCGCTGCAGGAGCGCGATGACGGCCGCTGGCTCGCTTGCGCCCTGGTGCCCCGCCCCGAA AGCGTATCGAGCGCCCGGTGGAACGAGGCGCTGCTGGTGGCGAACGGACAGGCCATCCTGCTCGCCCCGTGGGCCTTCAG CCTGGAGGAGAGCGGCGACGCGGTGTTGCTGATGCCGATCGATCCCGGCCTGACCGACGCCCGCGCGCTCGCGGCGCATT TCGACGGCATGCTGTCGCTGTGCGAAGCCGTCGCCACCGGTGCACAGGCGCTGGCCCAGGCCGGCCAGCCTGGCAAGGAG GCCGCATGA
Upstream 100 bases:
>100_bases TGCAGTCGATCCGCGAGAGACGGATTGGGCTGCGGCGGCGCGGAACACGCGCTGAACCTATGGTCCGGGACATGCGGACC TTTCCAGAAATCGGAGGAGT
Downstream 100 bases:
>100_bases ACGCCCCGCTCGACCTGTCGAACCATTCGCCCGTGCCCGCGCAGGAATTCGAAGCTTCGCCGGCCCTGCAGGCCCTGGTG TGCGATGCCGCGCTGGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTSKTTESAQAHVPQRIPLSPARRACLGAALRHMGADDHSARSFADEGMVMVNDILLAIASLQERDDGRWLACALVPRPE SVSSARWNEALLVANGQAILLAPWAFSLEESGDAVLLMPIDPGLTDARALAAHFDGMLSLCEAVATGAQALAQAGQPGKE AA
Sequences:
>Translated_162_residues MTSKTTESAQAHVPQRIPLSPARRACLGAALRHMGADDHSARSFADEGMVMVNDILLAIASLQERDDGRWLACALVPRPE SVSSARWNEALLVANGQAILLAPWAFSLEESGDAVLLMPIDPGLTDARALAAHFDGMLSLCEAVATGAQALAQAGQPGKE AA >Mature_161_residues TSKTTESAQAHVPQRIPLSPARRACLGAALRHMGADDHSARSFADEGMVMVNDILLAIASLQERDDGRWLACALVPRPES VSSARWNEALLVANGQAILLAPWAFSLEESGDAVLLMPIDPGLTDARALAAHFDGMLSLCEAVATGAQALAQAGQPGKEA A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16982; Mature: 16851
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKTTESAQAHVPQRIPLSPARRACLGAALRHMGADDHSARSFADEGMVMVNDILLAIA CCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHH SLQERDDGRWLACALVPRPESVSSARWNEALLVANGQAILLAPWAFSLEESGDAVLLMPI HHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEECCEEEECCCCCEEEEEEC DPGLTDARALAAHFDGMLSLCEAVATGAQALAQAGQPGKEAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TSKTTESAQAHVPQRIPLSPARRACLGAALRHMGADDHSARSFADEGMVMVNDILLAIA CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHH SLQERDDGRWLACALVPRPESVSSARWNEALLVANGQAILLAPWAFSLEESGDAVLLMPI HHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEECCEEEECCCCCEEEEEEC DPGLTDARALAAHFDGMLSLCEAVATGAQALAQAGQPGKEAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA