Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609126
Identifier: 120609126
GI number: 120609126
Start: 456362
End: 456844
Strand: Direct
Name: 120609126
Synonym: Aave_0423
Alternate gene names: NA
Gene position: 456362-456844 (Clockwise)
Preceding gene: 120609125
Following gene: 120609129
Centisome position: 8.53
GC content: 69.77
Gene sequence:
>483_bases ATGCCGGTTGAACTGTGCCTGCCCGCGCGGGCCGCGGAGGGTGAACCGGCGCGCTGCGTGGTGGTGGACACCAACGTGGC CCTGGACCTTCTGATCTTTTCCGATCCGCGCACGGGGCCGCTGCGGCAATTGCTGGCCCAGGGCCGGCTGGCGTGGATCG CCACGCAGGTCATGCGCGACGAGCTCGAGCGCGTGCTGGCCTATGCGCACATCGTGGAGCGCATGGACTTCTACCGGGTG GACGCCGCGCGGGTGCTCGCGGCGTTCGATGCCCAGGCGCGCCTGGTGGAGATCGCGCCGCGCGTGGCCTATGTCTGCAA GGACGCGGACGACCAGAAGTTCATCGACCTGGCGGCGGCCCACCGCGCCATCCTGCTGTCGAAGGACAAGGCCGTGCTCT GCATGCGCAAGCGGCTCCTGAACATGGACGCGCATGTGGCCACGGCCCTGGTGCTGGAGGCCGTGCAGCCGGAAGCCGCC TGA
Upstream 100 bases:
>100_bases ATGGTGCAGGGCGCCGTGCGCCCCCGGGCGGAGGGCGCGCCGCCGCCGCCGGCGGATGCGCCTGCCGGCCCCGGAAGCGC CGCGGACGCGGGCCGGAACC
Downstream 100 bases:
>100_bases ACGCGGCACCGGCGTTTCAGCCCTCGTCGAACTGGAAACCCTCCGCGGGATGCAGGGACCAGCCGCCGTCGCCCGTGAGC ACCAGCACGTGGGTATGGTG
Product: PilT domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MPVELCLPARAAEGEPARCVVVDTNVALDLLIFSDPRTGPLRQLLAQGRLAWIATQVMRDELERVLAYAHIVERMDFYRV DAARVLAAFDAQARLVEIAPRVAYVCKDADDQKFIDLAAAHRAILLSKDKAVLCMRKRLLNMDAHVATALVLEAVQPEAA
Sequences:
>Translated_160_residues MPVELCLPARAAEGEPARCVVVDTNVALDLLIFSDPRTGPLRQLLAQGRLAWIATQVMRDELERVLAYAHIVERMDFYRV DAARVLAAFDAQARLVEIAPRVAYVCKDADDQKFIDLAAAHRAILLSKDKAVLCMRKRLLNMDAHVATALVLEAVQPEAA >Mature_159_residues PVELCLPARAAEGEPARCVVVDTNVALDLLIFSDPRTGPLRQLLAQGRLAWIATQVMRDELERVLAYAHIVERMDFYRVD AARVLAAFDAQARLVEIAPRVAYVCKDADDQKFIDLAAAHRAILLSKDKAVLCMRKRLLNMDAHVATALVLEAVQPEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17704; Mature: 17573
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVELCLPARAAEGEPARCVVVDTNVALDLLIFSDPRTGPLRQLLAQGRLAWIATQVMRD CCCEECCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHH ELERVLAYAHIVERMDFYRVDAARVLAAFDAQARLVEIAPRVAYVCKDADDQKFIDLAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCHHHHHHHHH HRAILLSKDKAVLCMRKRLLNMDAHVATALVLEAVQPEAA HHHEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure PVELCLPARAAEGEPARCVVVDTNVALDLLIFSDPRTGPLRQLLAQGRLAWIATQVMRD CCEECCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHH ELERVLAYAHIVERMDFYRVDAARVLAAFDAQARLVEIAPRVAYVCKDADDQKFIDLAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCHHHHHHHHH HRAILLSKDKAVLCMRKRLLNMDAHVATALVLEAVQPEAA HHHEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA