Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yecA [C]
Identifier: 120609129
GI number: 120609129
Start: 459973
End: 460809
Strand: Direct
Name: yecA [C]
Synonym: Aave_0426
Alternate gene names: 120609129
Gene position: 459973-460809 (Clockwise)
Preceding gene: 120609126
Following gene: 120609130
Centisome position: 8.59
GC content: 69.65
Gene sequence:
>837_bases ATGACCGATCCCCACGCCCCCGCCGCCGATGCCTCCGGCGCCGTTCCCGCGCTCAGCAACGACGACCTCGATGAGCTGGA CGCACTGCTCGACGACCTGCGTTCGCGCGCCGAGGAAATCCCGCAGTGGGAATTCTGCGACGGCTTCCTCACGGCCCTCG TCTGCACGCGCCGCGCCATCGCGCCGGCCGAATACCTGCCCATGCTGCTGGACGACGGCGGTCCGATGGACATCGTGGCC GAAGGGGAGGCGCTGCCGCGACTGCCGGCCTTCCAGGACGATGCGCAGCAGGCCCGCTTCGTCGAGTTGTGGATGCGCCG CTGGAACGAGGTGGCGGGCCAGCTCGAGGACACGGTGGAGTCGCTGGAGGACGACCGGGCCTTCCAGCCCGAGGTGATGG ACATGCGCGGCGCGATCGCCTGCCTGCCCGAGGAGGAGCGCGCCGAGATGGCTGGCCAGGACGTGCCTTCGTTCGGTCAG GTCTGGGCGCTGGGCTTCATGTTCGCCGTGGAGAACTGGCCCGAGGAGTGGGCCGCGCCGCGCGACAAGGAGGCCGCGCA GTGGCTGGACGGCGCGCTCGACCACATCGTCGCGCTGACCGAGGACGACACCGGGCGCCCCGAGCACAACATGTATGCGG AGGATGGTCCGCCCAGCGTGAGCGAGGACCGGCTGGAAGTGTTCGGCGAGGCGATCTGGGCGGTCTATGACCTGCGCCAG CTCTGGAAGAGCATGGGCCCGCGCGTCGAATCGGTGCGCCGCGCGGACACGCCGGGCCGCAACGATCCGTGCAGCTGCGG CAGCGGCAAGAAATACAAGAAGTGCTGCGGAAACTGA
Upstream 100 bases:
>100_bases CATCATAGAGCGATGGGCCGGCCCGCCGCTGTCCGCCTTTTTCCCCATCTTCTTCAAAATACGGCCTGCCCGCGCGTGCG CGCCGGCCAGGAGCCCCCCG
Downstream 100 bases:
>100_bases GCACAACCCCCTGAGGCGCTGCGCGCCTTCCCCCTTCTCTCGCATCGCGATGCGATGCGGGAAGGGGGACGCCACCGGCG CGGCGGGGCGGCCCTTGCGC
Product: SecC motif-containing protein
Products: NA
Alternate protein names: Sec-C Motif Domain Protein; YecA Family Protein; SEC-C Motif Domain Protein; Preprotein Translocase SecA Subunit
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MTDPHAPAADASGAVPALSNDDLDELDALLDDLRSRAEEIPQWEFCDGFLTALVCTRRAIAPAEYLPMLLDDGGPMDIVA EGEALPRLPAFQDDAQQARFVELWMRRWNEVAGQLEDTVESLEDDRAFQPEVMDMRGAIACLPEEERAEMAGQDVPSFGQ VWALGFMFAVENWPEEWAAPRDKEAAQWLDGALDHIVALTEDDTGRPEHNMYAEDGPPSVSEDRLEVFGEAIWAVYDLRQ LWKSMGPRVESVRRADTPGRNDPCSCGSGKKYKKCCGN
Sequences:
>Translated_278_residues MTDPHAPAADASGAVPALSNDDLDELDALLDDLRSRAEEIPQWEFCDGFLTALVCTRRAIAPAEYLPMLLDDGGPMDIVA EGEALPRLPAFQDDAQQARFVELWMRRWNEVAGQLEDTVESLEDDRAFQPEVMDMRGAIACLPEEERAEMAGQDVPSFGQ VWALGFMFAVENWPEEWAAPRDKEAAQWLDGALDHIVALTEDDTGRPEHNMYAEDGPPSVSEDRLEVFGEAIWAVYDLRQ LWKSMGPRVESVRRADTPGRNDPCSCGSGKKYKKCCGN >Mature_277_residues TDPHAPAADASGAVPALSNDDLDELDALLDDLRSRAEEIPQWEFCDGFLTALVCTRRAIAPAEYLPMLLDDGGPMDIVAE GEALPRLPAFQDDAQQARFVELWMRRWNEVAGQLEDTVESLEDDRAFQPEVMDMRGAIACLPEEERAEMAGQDVPSFGQV WALGFMFAVENWPEEWAAPRDKEAAQWLDGALDHIVALTEDDTGRPEHNMYAEDGPPSVSEDRLEVFGEAIWAVYDLRQL WKSMGPRVESVRRADTPGRNDPCSCGSGKKYKKCCGN
Specific function: Unknown
COG id: COG3318
COG function: function code R; Predicted metal-binding protein related to the C-terminal domain of SecA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30933; Mature: 30801
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPHAPAADASGAVPALSNDDLDELDALLDDLRSRAEEIPQWEFCDGFLTALVCTRRAI CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC APAEYLPMLLDDGGPMDIVAEGEALPRLPAFQDDAQQARFVELWMRRWNEVAGQLEDTVE CCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SLEDDRAFQPEVMDMRGAIACLPEEERAEMAGQDVPSFGQVWALGFMFAVENWPEEWAAP HHHHCCCCCCHHHHHCCHHEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHCCC RDKEAAQWLDGALDHIVALTEDDTGRPEHNMYAEDGPPSVSEDRLEVFGEAIWAVYDLRQ CCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LWKSMGPRVESVRRADTPGRNDPCSCGSGKKYKKCCGN HHHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure TDPHAPAADASGAVPALSNDDLDELDALLDDLRSRAEEIPQWEFCDGFLTALVCTRRAI CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC APAEYLPMLLDDGGPMDIVAEGEALPRLPAFQDDAQQARFVELWMRRWNEVAGQLEDTVE CCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SLEDDRAFQPEVMDMRGAIACLPEEERAEMAGQDVPSFGQVWALGFMFAVENWPEEWAAP HHHHCCCCCCHHHHHCCHHEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHCCC RDKEAAQWLDGALDHIVALTEDDTGRPEHNMYAEDGPPSVSEDRLEVFGEAIWAVYDLRQ CCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LWKSMGPRVESVRRADTPGRNDPCSCGSGKKYKKCCGN HHHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA