Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609113
Identifier: 120609113
GI number: 120609113
Start: 441477
End: 442091
Strand: Direct
Name: 120609113
Synonym: Aave_0410
Alternate gene names: NA
Gene position: 441477-442091 (Clockwise)
Preceding gene: 120609112
Following gene: 120609114
Centisome position: 8.25
GC content: 73.5
Gene sequence:
>615_bases ATGACACACCGACTCCATGCCCCGCTTCCCGATGTTTTGCGCCGCCCCGCTCCGGGCCGGGTGTCCGCCGCCCTGGCGCT GGCCGGCCTGATGGCCGGCTGCGCGGGTGCGCCCGGCACTGCGCCGGCGCCCGCGCGGGACACCGCCGCGGCATCTTCCC GGGCCAAGGGCTCGCCGCCGCCCGGCATCGTCAGCGTGACCTATGCCGATCCGGCCGGTTTCAGCGACGCCCGCCGCGGG ATCCATGACACCGAGCAGGCCCGCCGTGCCTGGGTGGACGCGCTCTGCCTGTACCTGTCGGAAACCGCGGCCGCAGCGCT GCCCGAGGGCCAGCGGCTGGAAGTGCGGATCACCGATGTGCAGCGTGCCGGCGGTTTCGAACCCTGGCGCGGCCCGCAGG CAGGGCAGGTGCGCATCGTGCGCGACGTCTATCCGCCGCGTATCGTGCTCGAATTCAAGCGGCTGGCCGCCGACGGTTCG GTGTTGCAGTCGGGGCGCCGCGAGCTGCGCGACCCCGCGTTCATGGAGCGGGCCGCACGCGGTGGGACCGATCCGCTGCG GTACGAGAAAGGCCTCATCGACGACTGGGTGCGGCAGGAGTTCGGCGCGCGCTGA
Upstream 100 bases:
>100_bases TGTGGATCGACTACCTCAAGCACCACTATGCGCAGCCGGCGTTCTGGCGCCGCGCCGCGCATGCGCTCACCGCTCCCGTC CTCCCGTCTCCTCCTTCGCC
Downstream 100 bases:
>100_bases GCCTTGCAGCACGCGTGATGTAGGCCGTGCCCCACAGGCGTGCAGGCCGCGCGCCGACGGAGCATGCACGGCGGGCCCGC CTAGATTCGTCCCTCCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MTHRLHAPLPDVLRRPAPGRVSAALALAGLMAGCAGAPGTAPAPARDTAAASSRAKGSPPPGIVSVTYADPAGFSDARRG IHDTEQARRAWVDALCLYLSETAAAALPEGQRLEVRITDVQRAGGFEPWRGPQAGQVRIVRDVYPPRIVLEFKRLAADGS VLQSGRRELRDPAFMERAARGGTDPLRYEKGLIDDWVRQEFGAR
Sequences:
>Translated_204_residues MTHRLHAPLPDVLRRPAPGRVSAALALAGLMAGCAGAPGTAPAPARDTAAASSRAKGSPPPGIVSVTYADPAGFSDARRG IHDTEQARRAWVDALCLYLSETAAAALPEGQRLEVRITDVQRAGGFEPWRGPQAGQVRIVRDVYPPRIVLEFKRLAADGS VLQSGRRELRDPAFMERAARGGTDPLRYEKGLIDDWVRQEFGAR >Mature_203_residues THRLHAPLPDVLRRPAPGRVSAALALAGLMAGCAGAPGTAPAPARDTAAASSRAKGSPPPGIVSVTYADPAGFSDARRGI HDTEQARRAWVDALCLYLSETAAAALPEGQRLEVRITDVQRAGGFEPWRGPQAGQVRIVRDVYPPRIVLEFKRLAADGSV LQSGRRELRDPAFMERAARGGTDPLRYEKGLIDDWVRQEFGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21896; Mature: 21765
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHRLHAPLPDVLRRPAPGRVSAALALAGLMAGCAGAPGTAPAPARDTAAASSRAKGSPP CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCC PGIVSVTYADPAGFSDARRGIHDTEQARRAWVDALCLYLSETAAAALPEGQRLEVRITDV CCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECH QRAGGFEPWRGPQAGQVRIVRDVYPPRIVLEFKRLAADGSVLQSGRRELRDPAFMERAAR HHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHC GGTDPLRYEKGLIDDWVRQEFGAR CCCCCHHHHHCHHHHHHHHHHCCC >Mature Secondary Structure THRLHAPLPDVLRRPAPGRVSAALALAGLMAGCAGAPGTAPAPARDTAAASSRAKGSPP CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCC PGIVSVTYADPAGFSDARRGIHDTEQARRAWVDALCLYLSETAAAALPEGQRLEVRITDV CCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECH QRAGGFEPWRGPQAGQVRIVRDVYPPRIVLEFKRLAADGSVLQSGRRELRDPAFMERAAR HHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHC GGTDPLRYEKGLIDDWVRQEFGAR CCCCCHHHHHCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA