Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609087
Identifier: 120609087
GI number: 120609087
Start: 410982
End: 411530
Strand: Direct
Name: 120609087
Synonym: Aave_0384
Alternate gene names: NA
Gene position: 410982-411530 (Clockwise)
Preceding gene: 120609086
Following gene: 120609093
Centisome position: 7.68
GC content: 68.49
Gene sequence:
>549_bases ATGGATGACATCGTCAGGCAGGCCATCGCCAAGTGGCCCAACGTACCCGATTGCTATGGCTGGCTGGGCCTGGACGCGCG CGGGCGCTGGTTCATGCGGGACGACGCCGTGCAGGCGCAGGGTTCCTTCCCCCAGGCGCGCGGCGCCGTGCTGCAGCATG ACAAGCTGATCGATTTCATCCATCGCAATTACGAGCCCGATGCCCGGGGCCGCTGGTTCTTCCAGAATGGACCGCAGCGG GTGTACGTGGAGCTGGAGGCCACACCCGTGGTGTGGCGTGTCGAGGCGGGGGCGGAAGGCAGCGGTGAAGCCGGCTTCTC CATCGTGGCGCACACCGGACTGCGCTCGGCCGTGCAGGAGTGCCTGCTCGACGAGTCCGGGCGGCTCTACCTGTTCGACG GCCGGGTGCTCGGCCTCGTGCACACGCTCGACATGGAACTGGCTGCCCGTGCGGTGGAGCAGGGGCTCTGGACGCCTGCA GACGTGCGCGCGGACGAGCTGCCCCGGCGCTACGGCTACGTGCAGCGTCCTTCGGAACTGCGGGACTGA
Upstream 100 bases:
>100_bases GTCGCCGGGTGGCTGGCCCGGCAGGCGGGGCTTCCGGCCGCACATCCGCCGGGGCACGCGCCTACGCCATCGGAAGCCGC GGCGGGCTAGGATCGGCCCC
Downstream 100 bases:
>100_bases TCCCGGCCGCGGCAGAGGCCCAATAAAAAAAGCCGGTCGTGCGGACCGGCTTTCAGGGCAGACGGAAACCCTGGCGCCAG CTACTTGGCGGCGTTGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MDDIVRQAIAKWPNVPDCYGWLGLDARGRWFMRDDAVQAQGSFPQARGAVLQHDKLIDFIHRNYEPDARGRWFFQNGPQR VYVELEATPVVWRVEAGAEGSGEAGFSIVAHTGLRSAVQECLLDESGRLYLFDGRVLGLVHTLDMELAARAVEQGLWTPA DVRADELPRRYGYVQRPSELRD
Sequences:
>Translated_182_residues MDDIVRQAIAKWPNVPDCYGWLGLDARGRWFMRDDAVQAQGSFPQARGAVLQHDKLIDFIHRNYEPDARGRWFFQNGPQR VYVELEATPVVWRVEAGAEGSGEAGFSIVAHTGLRSAVQECLLDESGRLYLFDGRVLGLVHTLDMELAARAVEQGLWTPA DVRADELPRRYGYVQRPSELRD >Mature_182_residues MDDIVRQAIAKWPNVPDCYGWLGLDARGRWFMRDDAVQAQGSFPQARGAVLQHDKLIDFIHRNYEPDARGRWFFQNGPQR VYVELEATPVVWRVEAGAEGSGEAGFSIVAHTGLRSAVQECLLDESGRLYLFDGRVLGLVHTLDMELAARAVEQGLWTPA DVRADELPRRYGYVQRPSELRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20613; Mature: 20613
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDIVRQAIAKWPNVPDCYGWLGLDARGRWFMRDDAVQAQGSFPQARGAVLQHDKLIDFI CHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEECCCHHCCCCCCCCCCHHHHHHHHHHHH HRNYEPDARGRWFFQNGPQRVYVELEATPVVWRVEAGAEGSGEAGFSIVAHTGLRSAVQE HCCCCCCCCCEEEEECCCEEEEEEEECCCEEEEEECCCCCCCCCCEEEEEHHHHHHHHHH CLLDESGRLYLFDGRVLGLVHTLDMELAARAVEQGLWTPADVRADELPRRYGYVQRPSEL HHHCCCCCEEEECCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHH RD CC >Mature Secondary Structure MDDIVRQAIAKWPNVPDCYGWLGLDARGRWFMRDDAVQAQGSFPQARGAVLQHDKLIDFI CHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEECCCHHCCCCCCCCCCHHHHHHHHHHHH HRNYEPDARGRWFFQNGPQRVYVELEATPVVWRVEAGAEGSGEAGFSIVAHTGLRSAVQE HCCCCCCCCCEEEEECCCEEEEEEEECCCEEEEEECCCCCCCCCCEEEEEHHHHHHHHHH CLLDESGRLYLFDGRVLGLVHTLDMELAARAVEQGLWTPADVRADELPRRYGYVQRPSEL HHHCCCCCEEEECCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHH RD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA