Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yheT [H]
Identifier: 120609086
GI number: 120609086
Start: 409907
End: 410971
Strand: Direct
Name: yheT [H]
Synonym: Aave_0383
Alternate gene names: 120609086
Gene position: 409907-410971 (Clockwise)
Preceding gene: 120609085
Following gene: 120609087
Centisome position: 7.66
GC content: 75.31
Gene sequence:
>1065_bases ATGGACTATGTCGCGCCCCGGTGGCTTCCCGGAGGCCACCTGCAGACCATCTGGCCCGCGCTGGCATCGCGCCGCGCTGA GGGGGGCGCGCCGGCCTACCGGCGGGAGCGCTGGACCGCTCCGGACGGCGATTTCGTGGACGTGGACTTCCTGGACGCGC CCGCCGCGGCGCCGGAGCCGCCGCGGCCGCTGCTGGTGCTCTTCCACGGGCTGGAGGGCTCGTCGCGCAGCCACTATGCC GAAGCGTTCGCCGATGTGGCGCGCGCGCGCGGGTGGGACTATGCCGTGCCGCACTTCCGGGGATGCAGCGGCGAGATCAA CCTCGCGCCGCGCGCCTACCACTCGGGCGACCACGAGGAAATCGACTGGATCCTGCGGCGCATGGCGCAGCGGCAGCGGC CCGGCGGCGCGCCGGCCGGCCCCCGCGCGCCCCTGCTCGTGGCCGGAGTGTCGCTCGGCGGCAACGCGCTGCTGCGCTGG GCGGGCGAGCAGGGGCTGGCGGCCGCGCGCAGCGCCGATGCCGTGGCGGCCGTCTGCTCCCCGCTCGACCTGGCCGCGGG CGGCCGGGCCATCGGACAGGGCTTCAACCGGCTCGTCTATACGCGCATGTTCCTGCGCACCATGGTGCCCAAGGCCCTGG CCAAGTGGCGCCAGCACCCCGGCCTCTTCGACCGCGATGCCCTGCGCACGGTGCGCGACCTGCACGCCTTCGACGACCTG TTCACCGCGCCCCTGCACGGCTTCCGCGATGCGGACGACTATTGGCGCCGCGCATCCGCCCAACCCCTGCTGGGGGCCGT GCGCATTCCGGCGCTGGCCGTGAATGCGCTCAACGATCCCTTCGTTCCGGCGGACAGCCTGCCCCGGCCCGGGCAGGCCG GCACCCACGTGACGCTCTGGCAGCCGCCGCACGGCGGTCACGTGGGTTTCGCGTTCGGTCGCCTGCCCGGCCATGTCCGG GCCATGCCCGAAGCCGTCGCCGGGTGGCTGGCCCGGCAGGCGGGGCTTCCGGCCGCACATCCGCCGGGGCACGCGCCTAC GCCATCGGAAGCCGCGGCGGGCTAG
Upstream 100 bases:
>100_bases GCGGCTGGTCGCCCACCACGCCAGCCCGGGCACCGTCCACGAGGCCGTGGCCGGCCCGGTGCCGCCGGTGCTGCACTGAC CGGCCCGGAGCGCCCCCGGC
Downstream 100 bases:
>100_bases GATCGGCCCCATGGATGACATCGTCAGGCAGGCCATCGCCAAGTGGCCCAACGTACCCGATTGCTATGGCTGGCTGGGCC TGGACGCGCGCGGGCGCTGG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MDYVAPRWLPGGHLQTIWPALASRRAEGGAPAYRRERWTAPDGDFVDVDFLDAPAAAPEPPRPLLVLFHGLEGSSRSHYA EAFADVARARGWDYAVPHFRGCSGEINLAPRAYHSGDHEEIDWILRRMAQRQRPGGAPAGPRAPLLVAGVSLGGNALLRW AGEQGLAAARSADAVAAVCSPLDLAAGGRAIGQGFNRLVYTRMFLRTMVPKALAKWRQHPGLFDRDALRTVRDLHAFDDL FTAPLHGFRDADDYWRRASAQPLLGAVRIPALAVNALNDPFVPADSLPRPGQAGTHVTLWQPPHGGHVGFAFGRLPGHVR AMPEAVAGWLARQAGLPAAHPPGHAPTPSEAAAG
Sequences:
>Translated_354_residues MDYVAPRWLPGGHLQTIWPALASRRAEGGAPAYRRERWTAPDGDFVDVDFLDAPAAAPEPPRPLLVLFHGLEGSSRSHYA EAFADVARARGWDYAVPHFRGCSGEINLAPRAYHSGDHEEIDWILRRMAQRQRPGGAPAGPRAPLLVAGVSLGGNALLRW AGEQGLAAARSADAVAAVCSPLDLAAGGRAIGQGFNRLVYTRMFLRTMVPKALAKWRQHPGLFDRDALRTVRDLHAFDDL FTAPLHGFRDADDYWRRASAQPLLGAVRIPALAVNALNDPFVPADSLPRPGQAGTHVTLWQPPHGGHVGFAFGRLPGHVR AMPEAVAGWLARQAGLPAAHPPGHAPTPSEAAAG >Mature_354_residues MDYVAPRWLPGGHLQTIWPALASRRAEGGAPAYRRERWTAPDGDFVDVDFLDAPAAAPEPPRPLLVLFHGLEGSSRSHYA EAFADVARARGWDYAVPHFRGCSGEINLAPRAYHSGDHEEIDWILRRMAQRQRPGGAPAGPRAPLLVAGVSLGGNALLRW AGEQGLAAARSADAVAAVCSPLDLAAGGRAIGQGFNRLVYTRMFLRTMVPKALAKWRQHPGLFDRDALRTVRDLHAFDDL FTAPLHGFRDADDYWRRASAQPLLGAVRIPALAVNALNDPFVPADSLPRPGQAGTHVTLWQPPHGGHVGFAFGRLPGHVR AMPEAVAGWLARQAGLPAAHPPGHAPTPSEAAAG
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=289, Percent_Identity=28.3737024221453, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI194578891, Length=313, Percent_Identity=26.8370607028754, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI23397659, Length=334, Percent_Identity=25.1497005988024, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI23397661, Length=334, Percent_Identity=25.1497005988024, Blast_Score=85, Evalue=1e-16, Organism=Escherichia coli, GI1789752, Length=316, Percent_Identity=39.873417721519, Blast_Score=195, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17566110, Length=312, Percent_Identity=26.2820512820513, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71985405, Length=307, Percent_Identity=25.4071661237785, Blast_Score=95, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6323866, Length=266, Percent_Identity=25.5639097744361, Blast_Score=103, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6319655, Length=279, Percent_Identity=25.8064516129032, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI24652003, Length=316, Percent_Identity=25.3164556962025, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI281398151, Length=316, Percent_Identity=25.3164556962025, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24581365, Length=327, Percent_Identity=22.0183486238532, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 38023; Mature: 38023
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYVAPRWLPGGHLQTIWPALASRRAEGGAPAYRRERWTAPDGDFVDVDFLDAPAAAPEP CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCC PRPLLVLFHGLEGSSRSHYAEAFADVARARGWDYAVPHFRGCSGEINLAPRAYHSGDHEE CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCHHH IDWILRRMAQRQRPGGAPAGPRAPLLVAGVSLGGNALLRWAGEQGLAAARSADAVAAVCS HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHC PLDLAAGGRAIGQGFNRLVYTRMFLRTMVPKALAKWRQHPGLFDRDALRTVRDLHAFDDL CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH FTAPLHGFRDADDYWRRASAQPLLGAVRIPALAVNALNDPFVPADSLPRPGQAGTHVTLW HHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE QPPHGGHVGFAFGRLPGHVRAMPEAVAGWLARQAGLPAAHPPGHAPTPSEAAAG CCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDYVAPRWLPGGHLQTIWPALASRRAEGGAPAYRRERWTAPDGDFVDVDFLDAPAAAPEP CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCC PRPLLVLFHGLEGSSRSHYAEAFADVARARGWDYAVPHFRGCSGEINLAPRAYHSGDHEE CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCHHH IDWILRRMAQRQRPGGAPAGPRAPLLVAGVSLGGNALLRWAGEQGLAAARSADAVAAVCS HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHC PLDLAAGGRAIGQGFNRLVYTRMFLRTMVPKALAKWRQHPGLFDRDALRTVRDLHAFDDL CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH FTAPLHGFRDADDYWRRASAQPLLGAVRIPALAVNALNDPFVPADSLPRPGQAGTHVTLW HHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE QPPHGGHVGFAFGRLPGHVRAMPEAVAGWLARQAGLPAAHPPGHAPTPSEAAAG CCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]