| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608966
Identifier: 120608966
GI number: 120608966
Start: 293470
End: 293943
Strand: Direct
Name: 120608966
Synonym: Aave_0263
Alternate gene names: NA
Gene position: 293470-293943 (Clockwise)
Preceding gene: 120608965
Following gene: 120608967
Centisome position: 5.48
GC content: 72.57
Gene sequence:
>474_bases ATGAACCTGCTGCGCCGCTTCTTCATTCCCGTCCTCATCGCCCTGCTCGTCATCGCCGCCTACCGCTCGTACGGCTGGCA GGGCATCTTCGCCGTCGGCGGCGGCCTGGTCATGTGGGCGCTGCTGCATTTCACGCGGCTCATGAACGTGATGCGCAAGG CCGCCGACCGGCCCATCGGCTACGTGGGCAGCGCCGTCATGCTGAACGCCCGCCTGCGCGAGGGCGTGAACCTGATGCAC GTGGTGGCCATGACGCGCTCGCTGGGCGAGCTGCTGTCGCCCCAGGGCGAGGAGCCCGAGCGCTACCGCTGGACGGACGG CACGCAGTCGCACGTGACCTGCGAGTTCCGTGGCGGCCGGCTCGCCGCGTGGGAGCTCGTGCGTCCGGCGGCGGAAGCGG ACGCCGGGGCCGGCGGTGCGGCGGCCGGCGCTTCCGATGCGCCAGCGCCCTCCGTGGGGCCGTCCGCGCCGTAA
Upstream 100 bases:
>100_bases GCTGGTGCGTGAGGCATTGCAATGCCTGGCCGCGGTTGCGGCATCTCCTGTAAGCACCATCCACAGCGAGGGGCTTGCTC CGGCCGACGACAATCGGCGC
Downstream 100 bases:
>100_bases AATCGCCGGTTTTGCGACAGCATGCCCCCGGAAAAAGGATTCCCATGAGCCCCGTAGTTCCCTCGATGGCCGACCGTGAC GGCAAGATCTGGATGGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MNLLRRFFIPVLIALLVIAAYRSYGWQGIFAVGGGLVMWALLHFTRLMNVMRKAADRPIGYVGSAVMLNARLREGVNLMH VVAMTRSLGELLSPQGEEPERYRWTDGTQSHVTCEFRGGRLAAWELVRPAAEADAGAGGAAAGASDAPAPSVGPSAP
Sequences:
>Translated_157_residues MNLLRRFFIPVLIALLVIAAYRSYGWQGIFAVGGGLVMWALLHFTRLMNVMRKAADRPIGYVGSAVMLNARLREGVNLMH VVAMTRSLGELLSPQGEEPERYRWTDGTQSHVTCEFRGGRLAAWELVRPAAEADAGAGGAAAGASDAPAPSVGPSAP >Mature_157_residues MNLLRRFFIPVLIALLVIAAYRSYGWQGIFAVGGGLVMWALLHFTRLMNVMRKAADRPIGYVGSAVMLNARLREGVNLMH VVAMTRSLGELLSPQGEEPERYRWTDGTQSHVTCEFRGGRLAAWELVRPAAEADAGAGGAAAGASDAPAPSVGPSAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16821; Mature: 16821
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLRRFFIPVLIALLVIAAYRSYGWQGIFAVGGGLVMWALLHFTRLMNVMRKAADRPIG CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YVGSAVMLNARLREGVNLMHVVAMTRSLGELLSPQGEEPERYRWTDGTQSHVTCEFRGGR HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEECCCE LAAWELVRPAAEADAGAGGAAAGASDAPAPSVGPSAP EHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNLLRRFFIPVLIALLVIAAYRSYGWQGIFAVGGGLVMWALLHFTRLMNVMRKAADRPIG CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YVGSAVMLNARLREGVNLMHVVAMTRSLGELLSPQGEEPERYRWTDGTQSHVTCEFRGGR HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEECCCE LAAWELVRPAAEADAGAGGAAAGASDAPAPSVGPSAP EHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA