Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597427

Identifier: 120597427

GI number: 120597427

Start: 652747

End: 652953

Strand: Direct

Name: 120597427

Synonym: Sputw3181_0596

Alternate gene names: NA

Gene position: 652747-652953 (Clockwise)

Preceding gene: 120597426

Following gene: 120597428

Centisome position: 13.86

GC content: 47.34

Gene sequence:

>207_bases
ATGTCTTTGTTGAAATCTCTGGCGGTCAAGCCTTTATGCACCAAACTGGGTGCCATTGCGTACGTTATCGCTTTTACGGC
TGGGCTGAGTGCCTGTGCGCCAGAAGTGGGTAGCGATGCTTGGTGTAAACAGATGAAAAATAAGCCATCTGGCGATTGGA
CTGCTAACGAAGCTGCTGATTACGCTAAGCACTGTGTATTTAAGTAA

Upstream 100 bases:

>100_bases
TTGGTTTCCGCTTGAACAGAAAGCCAAAGCGATTGCTTGGATCACTAAGCGTTCGAATAATTAATTGCCTAAGATGGGCT
TTGTTTATAAGGAATTAAAT

Downstream 100 bases:

>100_bases
GTTGAGTGGTAATAGATCACAGCTTGGCGGCTTTTGCTTGCGGGCTGTGAACTTATGTTTATGATACGGGTCAGATGTTC
CGTTATCCGTTATTTGCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 68; Mature: 67

Protein sequence:

>68_residues
MSLLKSLAVKPLCTKLGAIAYVIAFTAGLSACAPEVGSDAWCKQMKNKPSGDWTANEAADYAKHCVFK

Sequences:

>Translated_68_residues
MSLLKSLAVKPLCTKLGAIAYVIAFTAGLSACAPEVGSDAWCKQMKNKPSGDWTANEAADYAKHCVFK
>Mature_67_residues
SLLKSLAVKPLCTKLGAIAYVIAFTAGLSACAPEVGSDAWCKQMKNKPSGDWTANEAADYAKHCVFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7221; Mature: 7090

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLKSLAVKPLCTKLGAIAYVIAFTAGLSACAPEVGSDAWCKQMKNKPSGDWTANEAAD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHH
YAKHCVFK
HHHHHCCC
>Mature Secondary Structure 
SLLKSLAVKPLCTKLGAIAYVIAFTAGLSACAPEVGSDAWCKQMKNKPSGDWTANEAAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHH
YAKHCVFK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA