Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
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Accession | NC_008750 |
Length | 4,708,380 |
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The map label for this gene is 120597426
Identifier: 120597426
GI number: 120597426
Start: 652345
End: 652710
Strand: Direct
Name: 120597426
Synonym: Sputw3181_0595
Alternate gene names: NA
Gene position: 652345-652710 (Clockwise)
Preceding gene: 120597422
Following gene: 120597427
Centisome position: 13.85
GC content: 49.18
Gene sequence:
>366_bases ATGTTATGCCAAATCCCCGATATTGCTAAGGGTGTTATCAGTCTTTTTGCCAGTGGCCGACTATCCTCCACCGATTATCG GACCCGTTTACAGCCAGCGATTAAGAGCTATCGTAAGGATTGGGGCCAAGTTTGCCTGTATATTGAGGCGGATGTGTTAC TCGAGGGCTGGGAATTTGAGTCGCTGACCGGCAGTGGTGAAGTTCAGTTACCGAATTTTGAAGCGCTAGTGTTTGTGGGT GGCCCTGATTGGGTGGGAAATGCGCTGCGCTTACTTGGGCCTTTTATGCAGGGCGAAGTGGCTTGGTTTCCGCTTGAACA GAAAGCCAAAGCGATTGCTTGGATCACTAAGCGTTCGAATAATTAA
Upstream 100 bases:
>100_bases TATGGCTTTCCAATAGATTTGTTATCATCGGGCGCATTCTTTGCCGCTGCATTGGCTAAAGCCATTGCCTGCAAAAGTGT TCTCGATTCGGAGTGCCTCT
Downstream 100 bases:
>100_bases TTGCCTAAGATGGGCTTTGTTTATAAGGAATTAAATATGTCTTTGTTGAAATCTCTGGCGGTCAAGCCTTTATGCACCAA ACTGGGTGCCATTGCGTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MLCQIPDIAKGVISLFASGRLSSTDYRTRLQPAIKSYRKDWGQVCLYIEADVLLEGWEFESLTGSGEVQLPNFEALVFVG GPDWVGNALRLLGPFMQGEVAWFPLEQKAKAIAWITKRSNN
Sequences:
>Translated_121_residues MLCQIPDIAKGVISLFASGRLSSTDYRTRLQPAIKSYRKDWGQVCLYIEADVLLEGWEFESLTGSGEVQLPNFEALVFVG GPDWVGNALRLLGPFMQGEVAWFPLEQKAKAIAWITKRSNN >Mature_121_residues MLCQIPDIAKGVISLFASGRLSSTDYRTRLQPAIKSYRKDWGQVCLYIEADVLLEGWEFESLTGSGEVQLPNFEALVFVG GPDWVGNALRLLGPFMQGEVAWFPLEQKAKAIAWITKRSNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13522; Mature: 13522
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCQIPDIAKGVISLFASGRLSSTDYRTRLQPAIKSYRKDWGQVCLYIEADVLLEGWEFE CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCC SLTGSGEVQLPNFEALVFVGGPDWVGNALRLLGPFMQGEVAWFPLEQKAKAIAWITKRSN CCCCCCCEECCCCEEEEEECCCCHHHHHHHHHCHHHCCCEEEECHHHHCCEEEEEEECCC N C >Mature Secondary Structure MLCQIPDIAKGVISLFASGRLSSTDYRTRLQPAIKSYRKDWGQVCLYIEADVLLEGWEFE CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCC SLTGSGEVQLPNFEALVFVGGPDWVGNALRLLGPFMQGEVAWFPLEQKAKAIAWITKRSN CCCCCCCEECCCCEEEEEECCCCHHHHHHHHHCHHHCCCEEEECHHHHCCEEEEEEECCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA