Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
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Accession | NC_008750 |
Length | 4,708,380 |
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The map label for this gene is 120597428
Identifier: 120597428
GI number: 120597428
Start: 653096
End: 653539
Strand: Direct
Name: 120597428
Synonym: Sputw3181_0597
Alternate gene names: NA
Gene position: 653096-653539 (Clockwise)
Preceding gene: 120597427
Following gene: 120597429
Centisome position: 13.87
GC content: 47.97
Gene sequence:
>444_bases ATGGTGACCCTACTGATAGCCATTATCGTGCTGCAATTTGCTGGCGCTAATTTGGGTGCGCATCAGTTACATGCGGGCAA TGGTGCGGAAGAAGCTGAGAATCACCCCCATCTGCAATTTAGTGCTCAAGTGACCACTTTGACCCAATGTATTGAGTGTG TTTGTCCAAGCGAGCAAGCCTTAGGCTTTGCGGACTCCACGGGTTTAACCAGTCATCACGCGGGTGAAAACCAAAGCAAC GGATTTCATTCCCACTTAGTGAAAACCACTGAAATACAAGATTTTGATCTATGCCTCGATTGCCAATGCCATGGCGGTCA TGTGGCGCTGTTATCTCAGGCAGTGAGTCAGCCTGTACAGGCGTTAGAAAGCGTCTATCTGCCTACCGATGTATCCTATT TCCCGCCTGATAATTTACCTAAAGATCGTCCTCCTATCGCTTAA
Upstream 100 bases:
>100_bases GGCTGTGAACTTATGTTTATGATACGGGTCAGATGTTCCGTTATCCGTTATTTGCTATAGGTGATATTTGAATTCTACCG CTAAGCCATTTTTTACTCGA
Downstream 100 bases:
>100_bases TTCTCCAATATTCTGCTTATTTCTCGGCCTAGGACGATTGAGTCATCTGATTGGATCTCATTCTATTTGACCGCGTGATA AGCCCGTTATGTTCATCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MVTLLIAIIVLQFAGANLGAHQLHAGNGAEEAENHPHLQFSAQVTTLTQCIECVCPSEQALGFADSTGLTSHHAGENQSN GFHSHLVKTTEIQDFDLCLDCQCHGGHVALLSQAVSQPVQALESVYLPTDVSYFPPDNLPKDRPPIA
Sequences:
>Translated_147_residues MVTLLIAIIVLQFAGANLGAHQLHAGNGAEEAENHPHLQFSAQVTTLTQCIECVCPSEQALGFADSTGLTSHHAGENQSN GFHSHLVKTTEIQDFDLCLDCQCHGGHVALLSQAVSQPVQALESVYLPTDVSYFPPDNLPKDRPPIA >Mature_147_residues MVTLLIAIIVLQFAGANLGAHQLHAGNGAEEAENHPHLQFSAQVTTLTQCIECVCPSEQALGFADSTGLTSHHAGENQSN GFHSHLVKTTEIQDFDLCLDCQCHGGHVALLSQAVSQPVQALESVYLPTDVSYFPPDNLPKDRPPIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15708; Mature: 15708
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTLLIAIIVLQFAGANLGAHQLHAGNGAEEAENHPHLQFSAQVTTLTQCIECVCPSEQA CHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCHHH LGFADSTGLTSHHAGENQSNGFHSHLVKTTEIQDFDLCLDCQCHGGHVALLSQAVSQPVQ CCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH ALESVYLPTDVSYFPPDNLPKDRPPIA HHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVTLLIAIIVLQFAGANLGAHQLHAGNGAEEAENHPHLQFSAQVTTLTQCIECVCPSEQA CHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCHHH LGFADSTGLTSHHAGENQSNGFHSHLVKTTEIQDFDLCLDCQCHGGHVALLSQAVSQPVQ CCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH ALESVYLPTDVSYFPPDNLPKDRPPIA HHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA