Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597422

Identifier: 120597422

GI number: 120597422

Start: 649755

End: 650429

Strand: Direct

Name: 120597422

Synonym: Sputw3181_0591

Alternate gene names: NA

Gene position: 649755-650429 (Clockwise)

Preceding gene: 120597421

Following gene: 120597426

Centisome position: 13.8

GC content: 41.19

Gene sequence:

>675_bases
GTGTTTAATGATTTTAAAGTTCAACTCAGCACTTTTGACTGGAATGGCGTTTCAGGCCTAACCAACATCTTAATGGTTTT
CCTTACAGCTTTATTGCTATATAGCCTCCGTCAAGGTTCTAAAAATATTAAAGAGTCAGCTCTTTCTCGTGATGCAGACA
TTCTGCGTTGGGCTATGGCAGAAATGGATATATTAAAGCCCGCTATTCGTGTGCTTACGAACGCCCACAAGCGCGTGGCT
TATTGTCAATGTAGTGAGGGCGGCCATACTACTAAAGAGTTCGCATGCAACTGGACTTCGGAAGAGCTCACCGCTGCGCA
GGACGTGAGCGTGAAATTGCAGAGAATTGGCTATATGGCGCTACATAATTTGATTTCCCGTAATCATTTTATGAATGTTT
GGGGACCTATGTATTTGTCTACTTGGTACTCACTGGAGCCTTGGGTTAAACATAAGCGACTCGAACTAGATGAACCTCTA
ACTATTGAAGATGGGGCATATTCTCGGATGTATTTGGAGCAATTTGCACAGTATTGTGAAGCTAATATGCCCGAAGTGTT
AGTGAACAATGAGCGTCGTCGTTTTAATTTGCCAGAAATGATAGTTAAGAAGCCAAGAATATCGAAAAATATTAAAAAGC
ACTTCAGACGTTCCAATGAAAAACTCGATATCTAA

Upstream 100 bases:

>100_bases
GAGTTCGAAAAATGTTAGCGATCTCGCGCTGGCTTTTTTTCAGTATAAATATTCAAGTTATTTACTATTTTTTGTCGTTA
ACATTTTATAGGATATTGTT

Downstream 100 bases:

>100_bases
ATTACTCTAATAAATTTCAGAACTATTCGTATACAGGGTGCTTGTCAATTACTCTCACTTGGTTAGCCGCGTTGTATGCT
GATATCGGCGATATAGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MFNDFKVQLSTFDWNGVSGLTNILMVFLTALLLYSLRQGSKNIKESALSRDADILRWAMAEMDILKPAIRVLTNAHKRVA
YCQCSEGGHTTKEFACNWTSEELTAAQDVSVKLQRIGYMALHNLISRNHFMNVWGPMYLSTWYSLEPWVKHKRLELDEPL
TIEDGAYSRMYLEQFAQYCEANMPEVLVNNERRRFNLPEMIVKKPRISKNIKKHFRRSNEKLDI

Sequences:

>Translated_224_residues
MFNDFKVQLSTFDWNGVSGLTNILMVFLTALLLYSLRQGSKNIKESALSRDADILRWAMAEMDILKPAIRVLTNAHKRVA
YCQCSEGGHTTKEFACNWTSEELTAAQDVSVKLQRIGYMALHNLISRNHFMNVWGPMYLSTWYSLEPWVKHKRLELDEPL
TIEDGAYSRMYLEQFAQYCEANMPEVLVNNERRRFNLPEMIVKKPRISKNIKKHFRRSNEKLDI
>Mature_224_residues
MFNDFKVQLSTFDWNGVSGLTNILMVFLTALLLYSLRQGSKNIKESALSRDADILRWAMAEMDILKPAIRVLTNAHKRVA
YCQCSEGGHTTKEFACNWTSEELTAAQDVSVKLQRIGYMALHNLISRNHFMNVWGPMYLSTWYSLEPWVKHKRLELDEPL
TIEDGAYSRMYLEQFAQYCEANMPEVLVNNERRRFNLPEMIVKKPRISKNIKKHFRRSNEKLDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26185; Mature: 26185

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS00368 RIBORED_SMALL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNDFKVQLSTFDWNGVSGLTNILMVFLTALLLYSLRQGSKNIKESALSRDADILRWAMA
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHH
EMDILKPAIRVLTNAHKRVAYCQCSEGGHTTKEFACNWTSEELTAAQDVSVKLQRIGYMA
HHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LHNLISRNHFMNVWGPMYLSTWYSLEPWVKHKRLELDEPLTIEDGAYSRMYLEQFAQYCE
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHC
ANMPEVLVNNERRRFNLPEMIVKKPRISKNIKKHFRRSNEKLDI
CCCCHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFNDFKVQLSTFDWNGVSGLTNILMVFLTALLLYSLRQGSKNIKESALSRDADILRWAMA
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHH
EMDILKPAIRVLTNAHKRVAYCQCSEGGHTTKEFACNWTSEELTAAQDVSVKLQRIGYMA
HHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LHNLISRNHFMNVWGPMYLSTWYSLEPWVKHKRLELDEPLTIEDGAYSRMYLEQFAQYCE
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHC
ANMPEVLVNNERRRFNLPEMIVKKPRISKNIKKHFRRSNEKLDI
CCCCHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA