Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597421

Identifier: 120597421

GI number: 120597421

Start: 648512

End: 649288

Strand: Direct

Name: 120597421

Synonym: Sputw3181_0590

Alternate gene names: NA

Gene position: 648512-649288 (Clockwise)

Preceding gene: 120597418

Following gene: 120597422

Centisome position: 13.77

GC content: 47.75

Gene sequence:

>777_bases
ATGAATATTCCCTTAGCGTTTACTCAAAAAAAGTGTTGCCAAAGTCAGCTCCATGGCGCTTATCAATGGCTGCGAAAGTG
GGGGACTTGGTCGCTTGTGGGTGGGACTGCACTTTTGAGTGGGTTGTGTGTATCCGCCAATGCAGTTGCTGGAAATCGGG
ACTATTCGGATCACGTTGAGTCTTATGCTCAGTCTCGCGATAGCTATAGCCGTCATATCAATCATGCGGATCAACGCTAT
GATAAGCGTTACCGCCACAAACATAAGTATCGCTATTACAATCCATGGGGCTTGGGCCTAGGGTTGGGGTTAGCAACGGG
ATGGCATTCTGGCTGGAACCTTGGTTATGGTTGGAATACCCAGTGGAATAATGATTGGGGCTGGAATACTCGCTACCCAT
ACTATCGTGAAGCTTATTTACGGGATAATTACGCCCGAGATTATCGCAATTCGCCTTATTCGAGCATTGGGTTTTCGATT
CCAATGGCCTATGACGATCAAGTTGTTGCAGTTTCAACCCCTGTGCGGGTGACAACCAGTATGCAATATGCGCCAGGAGA
AGGTCGGATGGTATCGAGTATGCCTGCGAGTGTTGGTAGCCAAACAAGCACTCCAGATAGTGCTTCAATTCAACAGCGCC
GTGCCCGTACCGTGTCTACTTTGCCAACCAATGCCAGAATAGTGCAGCAGGATGGCCGTACTCTTTACGAGTGGCAAGGT
ATACTTTATGCCTTTGATTGGAATAGTAAAACCTACCAAGAACAGTTCCGTCAATAA

Upstream 100 bases:

>100_bases
TAGGGTTAACCTATTCAGTGATCTTCAAGCTTTAGAAGCGTAAAATAAGCTTCCGTAGGCAATAGTCTAGCTCGCTTACG
CTTTATCTTTCGAGGTGCTT

Downstream 100 bases:

>100_bases
GATTTCAAATCTTGATAGAAATTTGCTTTTTTCTTTTAAAAGAATAAAGCACTCTGTACTCGATTATGAATAGTGCTAGA
TTGTTATAAAATTTTTAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MNIPLAFTQKKCCQSQLHGAYQWLRKWGTWSLVGGTALLSGLCVSANAVAGNRDYSDHVESYAQSRDSYSRHINHADQRY
DKRYRHKHKYRYYNPWGLGLGLGLATGWHSGWNLGYGWNTQWNNDWGWNTRYPYYREAYLRDNYARDYRNSPYSSIGFSI
PMAYDDQVVAVSTPVRVTTSMQYAPGEGRMVSSMPASVGSQTSTPDSASIQQRRARTVSTLPTNARIVQQDGRTLYEWQG
ILYAFDWNSKTYQEQFRQ

Sequences:

>Translated_258_residues
MNIPLAFTQKKCCQSQLHGAYQWLRKWGTWSLVGGTALLSGLCVSANAVAGNRDYSDHVESYAQSRDSYSRHINHADQRY
DKRYRHKHKYRYYNPWGLGLGLGLATGWHSGWNLGYGWNTQWNNDWGWNTRYPYYREAYLRDNYARDYRNSPYSSIGFSI
PMAYDDQVVAVSTPVRVTTSMQYAPGEGRMVSSMPASVGSQTSTPDSASIQQRRARTVSTLPTNARIVQQDGRTLYEWQG
ILYAFDWNSKTYQEQFRQ
>Mature_258_residues
MNIPLAFTQKKCCQSQLHGAYQWLRKWGTWSLVGGTALLSGLCVSANAVAGNRDYSDHVESYAQSRDSYSRHINHADQRY
DKRYRHKHKYRYYNPWGLGLGLGLATGWHSGWNLGYGWNTQWNNDWGWNTRYPYYREAYLRDNYARDYRNSPYSSIGFSI
PMAYDDQVVAVSTPVRVTTSMQYAPGEGRMVSSMPASVGSQTSTPDSASIQQRRARTVSTLPTNARIVQQDGRTLYEWQG
ILYAFDWNSKTYQEQFRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29785; Mature: 29785

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIPLAFTQKKCCQSQLHGAYQWLRKWGTWSLVGGTALLSGLCVSANAVAGNRDYSDHVE
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHH
SYAQSRDSYSRHINHADQRYDKRYRHKHKYRYYNPWGLGLGLGLATGWHSGWNLGYGWNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHCCCCCCCCCCCCCCC
QWNNDWGWNTRYPYYREAYLRDNYARDYRNSPYSSIGFSIPMAYDDQVVAVSTPVRVTTS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEECCEEEEEE
MQYAPGEGRMVSSMPASVGSQTSTPDSASIQQRRARTVSTLPTNARIVQQDGRTLYEWQG
EEECCCCCCEEECCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECC
ILYAFDWNSKTYQEQFRQ
EEEEEECCCHHHHHHHCC
>Mature Secondary Structure
MNIPLAFTQKKCCQSQLHGAYQWLRKWGTWSLVGGTALLSGLCVSANAVAGNRDYSDHVE
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHH
SYAQSRDSYSRHINHADQRYDKRYRHKHKYRYYNPWGLGLGLGLATGWHSGWNLGYGWNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHCCCCCCCCCCCCCCC
QWNNDWGWNTRYPYYREAYLRDNYARDYRNSPYSSIGFSIPMAYDDQVVAVSTPVRVTTS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEECCEEEEEE
MQYAPGEGRMVSSMPASVGSQTSTPDSASIQQRRARTVSTLPTNARIVQQDGRTLYEWQG
EEECCCCCCEEECCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECC
ILYAFDWNSKTYQEQFRQ
EEEEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA