Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
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Accession | NC_008750 |
Length | 4,708,380 |
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The map label for this gene is 120597412
Identifier: 120597412
GI number: 120597412
Start: 637632
End: 638123
Strand: Direct
Name: 120597412
Synonym: Sputw3181_0581
Alternate gene names: NA
Gene position: 637632-638123 (Clockwise)
Preceding gene: 120597411
Following gene: 120597413
Centisome position: 13.54
GC content: 46.75
Gene sequence:
>492_bases ATGAAGAAATACTATGCATTGTTGCTGTTAGTGCCTTTGCTATTTGGCTGTAATAAAAGCGAGGCCACAGACCATGTTCA TAAAGCCGAGATGATCCACGAGCATGACCGTTGTCATTTATGTGGCATGGTGATCACTAAATATCCCGGGCCTAAAGGGC AAGTGCACCTCAAGGCTGAGAAGACAGTACCTAAGTTTTGTTCGGTTCGCGATATGTTCAACTTTGCATTGCAGAGTGAG AACAAACGTCAAATTGACTACATGATGGTGCATGACGCGGGCAAGACCGATTGGGATCAGCCTGATGATGGCGCCTTTAT CGATGCTAAAAATGCCTTCTATGTTTACGGTACGACTAAGAAAGCCGTGATGGGACCTGCCGTTGCACCTTTTAGCACTC GCGCTGCTGCCGAAGCCTTTGCCAAGGAATATGGTGGTCGCGTACTGAGTTTTGATGACATCACCTTAGAACTGCTCGCG GGTGATAAATAA
Upstream 100 bases:
>100_bases AATGAAAGATGAAACCCGTTTCTATCAACCCTCGCCGTAACGATCTGTCCCTGCAAGGCATCTGGCGAGGTGTTGATATT TTAATAAAAGGATAAATAGG
Downstream 100 bases:
>100_bases GGCTGTGATGATGAAGCTGCGTCTATTGCTGATTGGGCTGCTGTGTTTTGCCTCTTTTGCTAGTTGGGCAGCACTCCTTC GGGTAACAGATACAGATTCA
Product: NosL family protein
Products: NA
Alternate protein names: NosL Protein; Protein Disulfide Isomerase NosL; Nitrous Oxide Reductase Accessory Protein NosL; Lipoprotein Involved In Nitrous Oxide Reduction; Nitrous Oxide Reductase Accessory Protein; Lipoprotein; NosL Lipoprotein; Protein Disulfide Isomerase NosL Family Protein; NosL Copper Chaperone; Nosl Family Protein; NosL Protein Required For Nitrous Oxide Reduction
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKKYYALLLLVPLLFGCNKSEATDHVHKAEMIHEHDRCHLCGMVITKYPGPKGQVHLKAEKTVPKFCSVRDMFNFALQSE NKRQIDYMMVHDAGKTDWDQPDDGAFIDAKNAFYVYGTTKKAVMGPAVAPFSTRAAAEAFAKEYGGRVLSFDDITLELLA GDK
Sequences:
>Translated_163_residues MKKYYALLLLVPLLFGCNKSEATDHVHKAEMIHEHDRCHLCGMVITKYPGPKGQVHLKAEKTVPKFCSVRDMFNFALQSE NKRQIDYMMVHDAGKTDWDQPDDGAFIDAKNAFYVYGTTKKAVMGPAVAPFSTRAAAEAFAKEYGGRVLSFDDITLELLA GDK >Mature_163_residues MKKYYALLLLVPLLFGCNKSEATDHVHKAEMIHEHDRCHLCGMVITKYPGPKGQVHLKAEKTVPKFCSVRDMFNFALQSE NKRQIDYMMVHDAGKTDWDQPDDGAFIDAKNAFYVYGTTKKAVMGPAVAPFSTRAAAEAFAKEYGGRVLSFDDITLELLA GDK
Specific function: Unknown
COG id: COG4314
COG function: function code C; Predicted lipoprotein involved in nitrous oxide reduction
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18250; Mature: 18250
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYYALLLLVPLLFGCNKSEATDHVHKAEMIHEHDRCHLCGMVITKYPGPKGQVHLKAE CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEC KTVPKFCSVRDMFNFALQSENKRQIDYMMVHDAGKTDWDQPDDGAFIDAKNAFYVYGTTK CCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCEEEEEECCC KAVMGPAVAPFSTRAAAEAFAKEYGGRVLSFDDITLELLAGDK HHHCCCCCCCCCHHHHHHHHHHHHCCEEEEECCEEEEEEECCC >Mature Secondary Structure MKKYYALLLLVPLLFGCNKSEATDHVHKAEMIHEHDRCHLCGMVITKYPGPKGQVHLKAE CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEC KTVPKFCSVRDMFNFALQSENKRQIDYMMVHDAGKTDWDQPDDGAFIDAKNAFYVYGTTK CCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCEEEEEECCC KAVMGPAVAPFSTRAAAEAFAKEYGGRVLSFDDITLELLAGDK HHHCCCCCCCCCHHHHHHHHHHHHCCEEEEECCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA