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The map label for this gene is nosD [H]

Identifier: 120597413

GI number: 120597413

Start: 638128

End: 639423

Strand: Direct

Name: nosD [H]

Synonym: Sputw3181_0582

Alternate gene names: 120597413

Gene position: 638128-639423 (Clockwise)

Preceding gene: 120597412

Following gene: 120597414

Centisome position: 13.55

GC content: 46.84

Gene sequence:

>1296_bases
GTGATGATGAAGCTGCGTCTATTGCTGATTGGGCTGCTGTGTTTTGCCTCTTTTGCTAGTTGGGCAGCACTCCTTCGGGT
AACAGATACAGATTCACTCACCCTTGCCCTTAACAAAGCTCAAGCTGGTGACACCTTAGTGTTAGCCACTGGGGTGTATG
AAGGCTCCTTTAAGGTGACGCAATCCATTTCGCTAAAGGGAGAAAGGGGCGCGACATTAGATGCACTGCGCCAAGGGAGT
GCGCTGATTATTGAGGCGCCTCAGGTGAGTATTGAGGGGCTAAATATCCGCCATTGGGGACGGGATCTGTATTACCGTGA
TGCCGCTATTTTACTAAAACAAGGGGCGGATAATGTGCTGATTAAGGGGAATCGCTTGGTGGGTGATGGTTTTGGCATTT
ATGGCGAACAGCTAAACTCGCCCACCATCACGGACAATAGCATTAGTGGCAACGGTGCTATTTATGTGCTTGATCGGGGA
GATGGTATTTATCTTAAGCATGTTAATTCGCCACAAATTGACCGAAATCAGCTGATTTTTGTCCGTGATGGTGTGTATTT
AGAGTCTGTTACCCAAAGCCGCATTTATGAAAATCAATTCGCTAAGCTGCAATATGGCATTCACTACATGTATACCCAAG
CCGACGAAGCGTGGCAAAACCAAGCGATTGCCGTCGATGGCGGTTATGCCCTAATGAATTCAACCCATATTTACCTGCAC
CACAACCGTGTTACCCAGGCGCGGGACTTTGGTATTTTGCTCAACATTACTGAGGCATCCTATGTGCAAGCCAATATTGC
CAGCCAAATTCATAACCCTAAGGGTACTGTGGAGCTTGGCAATGAAGGGAAAGGTATTTTTATTTACGCCGCTCAACATA
ACCGTATTCAAGATAACGAGTTTAGCTACAGCGATACCGGGATCAGTATGGCCATGGGCGGAGAGGAAAATCGCCTTTGG
CACAATCGTATTATAGCCAATCAAACCCAAGTCAAATATGTCGGTGAAAGCCAACTTGAATGGAGTTATCAGGGGCAGGG
GAATTACTGGTCCGAATATCAGGGCTGGGATCTGAATGGCGATGGATTAGGGGATATTGCCCATAGGCCGAATGACAGTT
TAGACAAACTGTTTTGGCTTTATCCTGAAGCCAAACTGTTGATGGAAAGCCCCGTTGTTTTACTACTGCGTTGGGTGGAA
CGTCAATTTCAGCCCCAAATGACGAGTGGTATAAGTGATAGTTTTCCCCTTATGCGGTCAAGTACTGTCTCACTGATTGA
TGGAGGTTCGCGATGA

Upstream 100 bases:

>100_bases
ACTCGCGCTGCTGCCGAAGCCTTTGCCAAGGAATATGGTGGTCGCGTACTGAGTTTTGATGACATCACCTTAGAACTGCT
CGCGGGTGATAAATAAGGCT

Downstream 100 bases:

>100_bases
ATTATCAGACTTTGACCTGCTCGTCGAATGCAAATGTTGTTAAAGCGATAAATGTCAGTAAAAGCTATGGCAAGTTTAAG
GCGCTAGATGAGGTGAGTTT

Product: periplasmic copper-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MMMKLRLLLIGLLCFASFASWAALLRVTDTDSLTLALNKAQAGDTLVLATGVYEGSFKVTQSISLKGERGATLDALRQGS
ALIIEAPQVSIEGLNIRHWGRDLYYRDAAILLKQGADNVLIKGNRLVGDGFGIYGEQLNSPTITDNSISGNGAIYVLDRG
DGIYLKHVNSPQIDRNQLIFVRDGVYLESVTQSRIYENQFAKLQYGIHYMYTQADEAWQNQAIAVDGGYALMNSTHIYLH
HNRVTQARDFGILLNITEASYVQANIASQIHNPKGTVELGNEGKGIFIYAAQHNRIQDNEFSYSDTGISMAMGGEENRLW
HNRIIANQTQVKYVGESQLEWSYQGQGNYWSEYQGWDLNGDGLGDIAHRPNDSLDKLFWLYPEAKLLMESPVVLLLRWVE
RQFQPQMTSGISDSFPLMRSSTVSLIDGGSR

Sequences:

>Translated_431_residues
MMMKLRLLLIGLLCFASFASWAALLRVTDTDSLTLALNKAQAGDTLVLATGVYEGSFKVTQSISLKGERGATLDALRQGS
ALIIEAPQVSIEGLNIRHWGRDLYYRDAAILLKQGADNVLIKGNRLVGDGFGIYGEQLNSPTITDNSISGNGAIYVLDRG
DGIYLKHVNSPQIDRNQLIFVRDGVYLESVTQSRIYENQFAKLQYGIHYMYTQADEAWQNQAIAVDGGYALMNSTHIYLH
HNRVTQARDFGILLNITEASYVQANIASQIHNPKGTVELGNEGKGIFIYAAQHNRIQDNEFSYSDTGISMAMGGEENRLW
HNRIIANQTQVKYVGESQLEWSYQGQGNYWSEYQGWDLNGDGLGDIAHRPNDSLDKLFWLYPEAKLLMESPVVLLLRWVE
RQFQPQMTSGISDSFPLMRSSTVSLIDGGSR
>Mature_431_residues
MMMKLRLLLIGLLCFASFASWAALLRVTDTDSLTLALNKAQAGDTLVLATGVYEGSFKVTQSISLKGERGATLDALRQGS
ALIIEAPQVSIEGLNIRHWGRDLYYRDAAILLKQGADNVLIKGNRLVGDGFGIYGEQLNSPTITDNSISGNGAIYVLDRG
DGIYLKHVNSPQIDRNQLIFVRDGVYLESVTQSRIYENQFAKLQYGIHYMYTQADEAWQNQAIAVDGGYALMNSTHIYLH
HNRVTQARDFGILLNITEASYVQANIASQIHNPKGTVELGNEGKGIFIYAAQHNRIQDNEFSYSDTGISMAMGGEENRLW
HNRIIANQTQVKYVGESQLEWSYQGQGNYWSEYQGWDLNGDGLGDIAHRPNDSLDKLFWLYPEAKLLMESPVVLLLRWVE
RQFQPQMTSGISDSFPLMRSSTVSLIDGGSR

Specific function: Involved in copper processing and transport; in the assembly of the copper chromophores of nitrous oxide reductase [H]

COG id: COG3420

COG function: function code P; Nitrous oxidase accessory protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006633
- InterPro:   IPR007742
- InterPro:   IPR022441
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF05048 NosD [H]

EC number: NA

Molecular weight: Translated: 48105; Mature: 48105

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMKLRLLLIGLLCFASFASWAALLRVTDTDSLTLALNKAQAGDTLVLATGVYEGSFKVT
CEEEHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEECCCCCCEEEEEEEEECCCEEEE
QSISLKGERGATLDALRQGSALIIEAPQVSIEGLNIRHWGRDLYYRDAAILLKQGADNVL
EEEEECCCCCCCHHHHHCCCEEEEECCCEEEEEEEEEECCCCEEECCEEEEEECCCCCEE
IKGNRLVGDGFGIYGEQLNSPTITDNSISGNGAIYVLDRGDGIYLKHVNSPQIDRNQLIF
EECCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCEEE
VRDGVYLESVTQSRIYENQFAKLQYGIHYMYTQADEAWQNQAIAVDGGYALMNSTHIYLH
EECCEEEEHHHHHHHHHHHHHEEEECEEEEEECCCHHHCCCEEEEECCEEEEECEEEEEE
HNRVTQARDFGILLNITEASYVQANIASQIHNPKGTVELGNEGKGIFIYAAQHNRIQDNE
ECCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCCCCCC
FSYSDTGISMAMGGEENRLWHNRIIANQTQVKYVGESQLEWSYQGQGNYWSEYQGWDLNG
CCCCCCCEEEEECCCCCCEEHHHEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCC
DGLGDIAHRPNDSLDKLFWLYPEAKLLMESPVVLLLRWVERQFQPQMTSGISDSFPLMRS
CCCCCCCCCCCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCC
STVSLIDGGSR
CEEEEECCCCC
>Mature Secondary Structure
MMMKLRLLLIGLLCFASFASWAALLRVTDTDSLTLALNKAQAGDTLVLATGVYEGSFKVT
CEEEHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEECCCCCCEEEEEEEEECCCEEEE
QSISLKGERGATLDALRQGSALIIEAPQVSIEGLNIRHWGRDLYYRDAAILLKQGADNVL
EEEEECCCCCCCHHHHHCCCEEEEECCCEEEEEEEEEECCCCEEECCEEEEEECCCCCEE
IKGNRLVGDGFGIYGEQLNSPTITDNSISGNGAIYVLDRGDGIYLKHVNSPQIDRNQLIF
EECCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCEEE
VRDGVYLESVTQSRIYENQFAKLQYGIHYMYTQADEAWQNQAIAVDGGYALMNSTHIYLH
EECCEEEEHHHHHHHHHHHHHEEEECEEEEEECCCHHHCCCEEEEECCEEEEECEEEEEE
HNRVTQARDFGILLNITEASYVQANIASQIHNPKGTVELGNEGKGIFIYAAQHNRIQDNE
ECCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCCCCCC
FSYSDTGISMAMGGEENRLWHNRIIANQTQVKYVGESQLEWSYQGQGNYWSEYQGWDLNG
CCCCCCCEEEEECCCCCCEEHHHEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCC
DGLGDIAHRPNDSLDKLFWLYPEAKLLMESPVVLLLRWVERQFQPQMTSGISDSFPLMRS
CCCCCCCCCCCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCC
STVSLIDGGSR
CEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]